Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1218:A1045
Extra
PDB:
ATOM 1 O3' G A1217 17.432 104.048 108.981 1.00 39.25 O
ATOM 2 P A A1218 16.796 103.975 107.514 1.00 39.81 P
ATOM 3 OP1 A A1218 16.937 105.292 106.828 1.00 39.17 O
ATOM 4 OP2 A A1218 15.467 103.319 107.588 1.00 39.32 O
ATOM 5 O5' A A1218 17.720 102.930 106.770 1.00 37.99 O
ATOM 6 C5' A A1218 17.322 102.410 105.517 1.00 35.41 C
ATOM 7 C4' A A1218 18.508 102.273 104.623 1.00 33.75 C
ATOM 8 O4' A A1218 19.473 101.394 105.250 1.00 33.42 O
ATOM 9 C3' A A1218 18.159 101.597 103.319 1.00 33.28 C
ATOM 10 O3' A A1218 17.657 102.575 102.407 1.00 34.35 O
ATOM 11 C2' A A1218 19.503 101.013 102.923 1.00 32.46 C
ATOM 12 O2' A A1218 20.358 102.029 102.454 1.00 30.86 O
ATOM 13 C1' A A1218 20.034 100.538 104.281 1.00 31.63 C
ATOM 14 N9 A A1218 19.692 99.161 104.656 1.00 32.94 N
ATOM 15 C8 A A1218 18.610 98.724 105.393 1.00 33.35 C
ATOM 16 N7 A A1218 18.586 97.427 105.575 1.00 32.48 N
ATOM 17 C5 A A1218 19.724 96.976 104.916 1.00 32.43 C
ATOM 18 C6 A A1218 20.269 95.690 104.736 1.00 32.32 C
ATOM 19 N6 A A1218 19.726 94.574 105.234 1.00 33.11 N
ATOM 20 N1 A A1218 21.407 95.586 104.018 1.00 31.61 N
ATOM 21 C2 A A1218 21.955 96.700 103.525 1.00 32.80 C
ATOM 22 N3 A A1218 21.542 97.963 103.632 1.00 33.07 N
ATOM 23 C4 A A1218 20.410 98.031 104.344 1.00 32.61 C
ATOM 24 P G A1219 16.395 102.242 101.459 1.00 35.48 P
ATOM 25 OP1 G A1219 15.874 103.557 101.018 1.00 35.10 O
ATOM 26 OP2 G A1219 15.465 101.248 102.044 1.00 35.09 O
ATOM 27 O5' G A1219 17.067 101.547 100.203 1.00 34.03 O
TER
ATOM 1 O3' C B1044 24.925 91.768 106.040 1.00 34.75 O
ATOM 2 P A B1045 24.997 90.940 104.682 1.00 36.05 P
ATOM 3 OP1 A B1045 23.838 90.031 104.678 1.00 35.89 O
ATOM 4 OP2 A B1045 26.349 90.395 104.488 1.00 35.40 O
ATOM 5 O5' A B1045 24.793 92.048 103.573 1.00 37.29 O
ATOM 6 C5' A B1045 23.597 92.818 103.499 1.00 38.39 C
ATOM 7 C4' A B1045 23.773 93.878 102.454 1.00 40.50 C
ATOM 8 O4' A B1045 24.735 94.867 102.912 1.00 41.69 O
ATOM 9 C3' A B1045 24.338 93.347 101.147 1.00 39.65 C
ATOM 10 O3' A B1045 23.251 92.829 100.376 1.00 38.01 O
ATOM 11 C2' A B1045 25.015 94.594 100.574 1.00 41.37 C
ATOM 12 O2' A B1045 24.132 95.540 100.028 1.00 42.76 O
ATOM 13 C1' A B1045 25.555 95.265 101.839 1.00 42.10 C
ATOM 14 N9 A B1045 26.916 94.850 102.132 1.00 42.70 N
ATOM 15 C8 A B1045 27.355 93.831 102.933 1.00 43.47 C
ATOM 16 N7 A B1045 28.650 93.665 102.907 1.00 43.08 N
ATOM 17 C5 A B1045 29.089 94.651 102.046 1.00 43.86 C
ATOM 18 C6 A B1045 30.358 94.983 101.586 1.00 45.28 C
ATOM 19 N6 A B1045 31.444 94.294 101.914 1.00 46.65 N
ATOM 20 N1 A B1045 30.478 96.041 100.759 1.00 44.96 N
ATOM 21 C2 A B1045 29.366 96.690 100.405 1.00 45.00 C
ATOM 22 N3 A B1045 28.101 96.451 100.754 1.00 45.09 N
ATOM 23 C4 A B1045 28.035 95.405 101.586 1.00 43.79 C
ATOM 24 P G B1046 23.302 91.343 99.779 1.00 37.72 P
ATOM 25 OP1 G B1046 21.901 90.890 99.802 1.00 38.77 O
ATOM 26 OP2 G B1046 24.346 90.477 100.382 1.00 38.99 O
ATOM 27 O5' G B1046 23.689 91.605 98.262 1.00 39.10 O
TER
ATOM 2 P A A1218 16.796 103.975 107.514 1.00 39.81 P
ATOM 3 OP1 A A1218 16.937 105.292 106.828 1.00 39.17 O
ATOM 4 OP2 A A1218 15.467 103.319 107.588 1.00 39.32 O
ATOM 5 O5' A A1218 17.720 102.930 106.770 1.00 37.99 O
ATOM 6 C5' A A1218 17.322 102.410 105.517 1.00 35.41 C
ATOM 7 C4' A A1218 18.508 102.273 104.623 1.00 33.75 C
ATOM 8 O4' A A1218 19.473 101.394 105.250 1.00 33.42 O
ATOM 9 C3' A A1218 18.159 101.597 103.319 1.00 33.28 C
ATOM 10 O3' A A1218 17.657 102.575 102.407 1.00 34.35 O
ATOM 11 C2' A A1218 19.503 101.013 102.923 1.00 32.46 C
ATOM 12 O2' A A1218 20.358 102.029 102.454 1.00 30.86 O
ATOM 13 C1' A A1218 20.034 100.538 104.281 1.00 31.63 C
ATOM 14 N9 A A1218 19.692 99.161 104.656 1.00 32.94 N
ATOM 15 C8 A A1218 18.610 98.724 105.393 1.00 33.35 C
ATOM 16 N7 A A1218 18.586 97.427 105.575 1.00 32.48 N
ATOM 17 C5 A A1218 19.724 96.976 104.916 1.00 32.43 C
ATOM 18 C6 A A1218 20.269 95.690 104.736 1.00 32.32 C
ATOM 19 N6 A A1218 19.726 94.574 105.234 1.00 33.11 N
ATOM 20 N1 A A1218 21.407 95.586 104.018 1.00 31.61 N
ATOM 21 C2 A A1218 21.955 96.700 103.525 1.00 32.80 C
ATOM 22 N3 A A1218 21.542 97.963 103.632 1.00 33.07 N
ATOM 23 C4 A A1218 20.410 98.031 104.344 1.00 32.61 C
ATOM 24 P G A1219 16.395 102.242 101.459 1.00 35.48 P
ATOM 25 OP1 G A1219 15.874 103.557 101.018 1.00 35.10 O
ATOM 26 OP2 G A1219 15.465 101.248 102.044 1.00 35.09 O
ATOM 27 O5' G A1219 17.067 101.547 100.203 1.00 34.03 O
TER
ATOM 1 O3' C B1044 24.925 91.768 106.040 1.00 34.75 O
ATOM 2 P A B1045 24.997 90.940 104.682 1.00 36.05 P
ATOM 3 OP1 A B1045 23.838 90.031 104.678 1.00 35.89 O
ATOM 4 OP2 A B1045 26.349 90.395 104.488 1.00 35.40 O
ATOM 5 O5' A B1045 24.793 92.048 103.573 1.00 37.29 O
ATOM 6 C5' A B1045 23.597 92.818 103.499 1.00 38.39 C
ATOM 7 C4' A B1045 23.773 93.878 102.454 1.00 40.50 C
ATOM 8 O4' A B1045 24.735 94.867 102.912 1.00 41.69 O
ATOM 9 C3' A B1045 24.338 93.347 101.147 1.00 39.65 C
ATOM 10 O3' A B1045 23.251 92.829 100.376 1.00 38.01 O
ATOM 11 C2' A B1045 25.015 94.594 100.574 1.00 41.37 C
ATOM 12 O2' A B1045 24.132 95.540 100.028 1.00 42.76 O
ATOM 13 C1' A B1045 25.555 95.265 101.839 1.00 42.10 C
ATOM 14 N9 A B1045 26.916 94.850 102.132 1.00 42.70 N
ATOM 15 C8 A B1045 27.355 93.831 102.933 1.00 43.47 C
ATOM 16 N7 A B1045 28.650 93.665 102.907 1.00 43.08 N
ATOM 17 C5 A B1045 29.089 94.651 102.046 1.00 43.86 C
ATOM 18 C6 A B1045 30.358 94.983 101.586 1.00 45.28 C
ATOM 19 N6 A B1045 31.444 94.294 101.914 1.00 46.65 N
ATOM 20 N1 A B1045 30.478 96.041 100.759 1.00 44.96 N
ATOM 21 C2 A B1045 29.366 96.690 100.405 1.00 45.00 C
ATOM 22 N3 A B1045 28.101 96.451 100.754 1.00 45.09 N
ATOM 23 C4 A B1045 28.035 95.405 101.586 1.00 43.79 C
ATOM 24 P G B1046 23.302 91.343 99.779 1.00 37.72 P
ATOM 25 OP1 G B1046 21.901 90.890 99.802 1.00 38.77 O
ATOM 26 OP2 G B1046 24.346 90.477 100.382 1.00 38.99 O
ATOM 27 O5' G B1046 23.689 91.605 98.262 1.00 39.10 O
TER
Atoms:
OP1: (16.937,105.292,106.828)
OP2: (15.467,103.319,107.588)
C3': (18.159,101.597,103.319)
C1': (20.034,100.538,104.281)
C5': (17.322,102.410,105.517)
O4': (19.473,101.394,105.250)
C8: (18.610,98.724,105.393)
O2': (20.358,102.029,102.454)
C6: (20.269,95.690,104.736)
C5: (19.724,96.976,104.916)
C4: (20.410,98.031,104.344)
P: (16.796,103.975,107.514)
C4': (18.508,102.273,104.623)
C2': (19.503,101.013,102.923)
C2: (21.955,96.700,103.525)
N1: (21.407,95.586,104.018)
N3: (21.542,97.963,103.632)
N6: (19.726,94.574,105.234)
N7: (18.586,97.427,105.575)
N9: (19.692,99.161,104.656)
O5': (17.720,102.930,106.770)
O3': (17.657,102.575,102.407)
OP2: (15.467,103.319,107.588)
C3': (18.159,101.597,103.319)
C1': (20.034,100.538,104.281)
C5': (17.322,102.410,105.517)
O4': (19.473,101.394,105.250)
C8: (18.610,98.724,105.393)
O2': (20.358,102.029,102.454)
C6: (20.269,95.690,104.736)
C5: (19.724,96.976,104.916)
C4: (20.410,98.031,104.344)
P: (16.796,103.975,107.514)
C4': (18.508,102.273,104.623)
C2': (19.503,101.013,102.923)
C2: (21.955,96.700,103.525)
N1: (21.407,95.586,104.018)
N3: (21.542,97.963,103.632)
N6: (19.726,94.574,105.234)
N7: (18.586,97.427,105.575)
N9: (19.692,99.161,104.656)
O5': (17.720,102.930,106.770)
O3': (17.657,102.575,102.407)
OP1: (23.838,90.031,104.678)
OP2: (26.349,90.395,104.488)
C3': (24.338,93.347,101.147)
C1': (25.555,95.265,101.839)
C5': (23.597,92.818,103.499)
O4': (24.735,94.867,102.912)
C8: (27.355,93.831,102.933)
O2': (24.132,95.540,100.028)
C6: (30.358,94.983,101.586)
C5: (29.089,94.651,102.046)
C4: (28.035,95.405,101.586)
P: (24.997,90.940,104.682)
C4': (23.773,93.878,102.454)
C2': (25.015,94.594,100.574)
C2: (29.366,96.690,100.405)
N1: (30.478,96.041,100.759)
N3: (28.101,96.451,100.754)
N6: (31.444,94.294,101.914)
N7: (28.650,93.665,102.907)
N9: (26.916,94.850,102.132)
O5': (24.793,92.048,103.573)
O3': (23.251,92.829,100.376)
OP2: (26.349,90.395,104.488)
C3': (24.338,93.347,101.147)
C1': (25.555,95.265,101.839)
C5': (23.597,92.818,103.499)
O4': (24.735,94.867,102.912)
C8: (27.355,93.831,102.933)
O2': (24.132,95.540,100.028)
C6: (30.358,94.983,101.586)
C5: (29.089,94.651,102.046)
C4: (28.035,95.405,101.586)
P: (24.997,90.940,104.682)
C4': (23.773,93.878,102.454)
C2': (25.015,94.594,100.574)
C2: (29.366,96.690,100.405)
N1: (30.478,96.041,100.759)
N3: (28.101,96.451,100.754)
N6: (31.444,94.294,101.914)
N7: (28.650,93.665,102.907)
N9: (26.916,94.850,102.132)
O5': (24.793,92.048,103.573)
O3': (23.251,92.829,100.376)
Image (generated by PyMOL):