ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1L8V:A48:A121

Extra

PDB:
ATOM 1 O3' G A 47 -18.208 -74.966 105.267 1.00101.56 O
ATOM 2 P A A 48 -18.761 -76.299 105.963 1.00 98.05 P
ATOM 3 OP1 A A 48 -19.780 -75.895 106.958 1.00 98.72 O
ATOM 4 OP2 A A 48 -17.586 -77.107 106.381 1.00 97.98 O
ATOM 5 O5' A A 48 -19.446 -77.108 104.775 1.00 96.47 O
ATOM 6 C5' A A 48 -19.934 -78.433 104.962 1.00 94.73 C
ATOM 7 C4' A A 48 -21.325 -78.533 104.396 1.00 93.61 C
ATOM 8 O4' A A 48 -22.172 -77.584 105.084 1.00 92.48 O
ATOM 9 C3' A A 48 -21.415 -78.129 102.938 1.00 93.33 C
ATOM 10 O3' A A 48 -21.142 -79.289 102.150 1.00 94.45 O
ATOM 11 C2' A A 48 -22.867 -77.662 102.811 1.00 92.91 C
ATOM 12 O2' A A 48 -23.819 -78.679 102.582 1.00 92.75 O
ATOM 13 C1' A A 48 -23.115 -77.045 104.185 1.00 93.13 C
ATOM 14 N9 A A 48 -23.063 -75.592 104.303 1.00 94.51 N
ATOM 15 C8 A A 48 -22.258 -74.861 105.139 1.00 95.79 C
ATOM 16 N7 A A 48 -22.507 -73.577 105.125 1.00 96.41 N
ATOM 17 C5 A A 48 -23.527 -73.453 104.196 1.00 96.23 C
ATOM 18 C6 A A 48 -24.241 -72.344 103.733 1.00 97.04 C
ATOM 19 N6 A A 48 -24.028 -71.101 104.170 1.00 95.65 N
ATOM 20 N1 A A 48 -25.194 -72.556 102.797 1.00 96.71 N
ATOM 21 C2 A A 48 -25.399 -73.809 102.366 1.00 95.90 C
ATOM 22 N3 A A 48 -24.789 -74.935 102.730 1.00 95.56 N
ATOM 23 C4 A A 48 -23.857 -74.683 103.661 1.00 94.88 C
ATOM 24 P A A 49 -20.067 -79.219 100.952 1.00 96.08 P
ATOM 25 OP1 A A 49 -19.750 -80.612 100.517 1.00 94.33 O
ATOM 26 OP2 A A 49 -18.977 -78.323 101.412 1.00 93.18 O
ATOM 27 O5' A A 49 -20.885 -78.554 99.758 1.00 95.08 O
TER

ATOM 1 O3' U B 120 -27.667 -75.725 96.774 1.00 96.24 O
ATOM 2 P A B 121 -28.919 -76.308 97.582 1.00 97.91 P
ATOM 3 OP1 A B 121 -28.557 -77.714 97.952 1.00 98.96 O
ATOM 4 OP2 A B 121 -30.169 -76.028 96.835 1.00 95.82 O
ATOM 5 O5' A B 121 -28.960 -75.404 98.888 1.00 98.33 O
ATOM 6 C5' A B 121 -27.873 -75.414 99.817 1.00 99.79 C
ATOM 7 C4' A B 121 -28.319 -74.810 101.113 1.00 99.59 C
ATOM 8 O4' A B 121 -28.675 -73.441 100.894 1.00 99.31 O
ATOM 9 C3' A B 121 -29.571 -75.479 101.631 1.00100.12 C
ATOM 10 O3' A B 121 -28.963 -76.620 102.287 1.00100.32 O
ATOM 11 C2' A B 121 -30.250 -74.371 102.447 1.00100.22 C
ATOM 12 O2' A B 121 -29.932 -74.335 103.819 1.00101.60 O
ATOM 13 C1' A B 121 -29.741 -73.102 101.735 1.00100.40 C
ATOM 14 N9 A B 121 -30.541 -72.094 101.041 1.00100.98 N
ATOM 15 C8 A B 121 -31.167 -72.151 99.825 1.00102.74 C
ATOM 16 N7 A B 121 -31.701 -71.011 99.451 1.00103.18 N
ATOM 17 C5 A B 121 -31.430 -70.153 100.506 1.00103.23 C
ATOM 18 C6 A B 121 -31.733 -68.791 100.733 1.00103.24 C
ATOM 19 N6 A B 121 -32.407 -68.017 99.876 1.00102.09 N
ATOM 20 N1 A B 121 -31.311 -68.243 101.890 1.00102.26 N
ATOM 21 C2 A B 121 -30.635 -69.012 102.754 1.00103.16 C
ATOM 22 N3 A B 121 -30.293 -70.292 102.657 1.00103.09 N
ATOM 23 C4 A B 121 -30.728 -70.811 101.497 1.00102.75 C
ATOM 24 P A B 122 -29.384 -77.090 103.770 1.00100.37 P
ATOM 25 OP1 A B 122 -29.280 -78.581 103.743 1.00100.78 O
ATOM 26 OP2 A B 122 -30.665 -76.450 104.209 1.00100.87 O
ATOM 27 O5' A B 122 -28.200 -76.586 104.719 1.00 98.79 O
TER

Atoms:
OP1: (-19.780,-75.895,106.958)
OP2: (-17.586,-77.107,106.381)
C3': (-21.415,-78.129,102.938)
C1': (-23.115,-77.045,104.185)
C5': (-19.934,-78.433,104.962)
O4': (-22.172,-77.584,105.084)
C8: (-22.258,-74.861,105.139)
O2': (-23.819,-78.679,102.582)
C6: (-24.241,-72.344,103.733)
C5: (-23.527,-73.453,104.196)
C4: (-23.857,-74.683,103.661)
P: (-18.761,-76.299,105.963)
C4': (-21.325,-78.533,104.396)
C2': (-22.867,-77.662,102.811)
C2: (-25.399,-73.809,102.366)
N1: (-25.194,-72.556,102.797)
N3: (-24.789,-74.935,102.730)
N6: (-24.028,-71.101,104.170)
N7: (-22.507,-73.577,105.125)
N9: (-23.063,-75.592,104.303)
O5': (-19.446,-77.108,104.775)
O3': (-21.142,-79.289,102.150)
OP1: (-28.557,-77.714,97.952)
OP2: (-30.169,-76.028,96.835)
C3': (-29.571,-75.479,101.631)
C1': (-29.741,-73.102,101.735)
C5': (-27.873,-75.414,99.817)
O4': (-28.675,-73.441,100.894)
C8: (-31.167,-72.151,99.825)
O2': (-29.932,-74.335,103.819)
C6: (-31.733,-68.791,100.733)
C5: (-31.430,-70.153,100.506)
C4: (-30.728,-70.811,101.497)
P: (-28.919,-76.308,97.582)
C4': (-28.319,-74.810,101.113)
C2': (-30.250,-74.371,102.447)
C2: (-30.635,-69.012,102.754)
N1: (-31.311,-68.243,101.890)
N3: (-30.293,-70.292,102.657)
N6: (-32.407,-68.017,99.876)
N7: (-31.701,-71.011,99.451)
N9: (-30.541,-72.094,101.041)
O5': (-28.960,-75.404,98.888)
O3': (-28.963,-76.620,102.287)
Image (generated by PyMOL):
PyMOL image
show in jmol