Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:01218:01045
Extra
PDB:
ATOM 1 O3' G A1217 17.205 103.346 108.737 1.00 30.27 O
ATOM 2 P A A1218 16.588 103.284 107.256 1.00 33.71 P
ATOM 3 OP1 A A1218 16.851 104.604 106.616 1.00 34.26 O
ATOM 4 OP2 A A1218 15.192 102.775 107.321 1.00 34.17 O
ATOM 5 O5' A A1218 17.479 102.185 106.526 1.00 30.27 O
ATOM 6 C5' A A1218 17.068 101.630 105.267 1.00 29.43 C
ATOM 7 C4' A A1218 18.237 101.551 104.307 1.00 27.69 C
ATOM 8 O4' A A1218 19.300 100.742 104.871 1.00 28.59 O
ATOM 9 C3' A A1218 17.892 100.878 102.992 1.00 28.36 C
ATOM 10 O3' A A1218 17.359 101.845 102.094 1.00 26.88 O
ATOM 11 C2' A A1218 19.232 100.321 102.538 1.00 27.03 C
ATOM 12 O2' A A1218 20.054 101.316 101.974 1.00 29.93 O
ATOM 13 C1' A A1218 19.848 99.901 103.871 1.00 27.22 C
ATOM 14 N9 A A1218 19.554 98.520 104.246 1.00 28.53 N
ATOM 15 C8 A A1218 18.514 98.086 105.025 1.00 29.31 C
ATOM 16 N7 A A1218 18.493 96.791 105.206 1.00 30.74 N
ATOM 17 C5 A A1218 19.588 96.337 104.496 1.00 27.88 C
ATOM 18 C6 A A1218 20.101 95.055 104.288 1.00 28.87 C
ATOM 19 N6 A A1218 19.549 93.947 104.791 1.00 29.18 N
ATOM 20 N1 A A1218 21.215 94.941 103.531 1.00 29.82 N
ATOM 21 C2 A A1218 21.759 96.054 103.021 1.00 29.23 C
ATOM 22 N3 A A1218 21.361 97.317 103.142 1.00 28.95 N
ATOM 23 C4 A A1218 20.256 97.392 103.900 1.00 28.75 C
ATOM 24 P G A1219 16.146 101.456 101.118 1.00 26.13 P
ATOM 25 OP1 G A1219 15.462 102.725 100.774 1.00 27.79 O
ATOM 26 OP2 G A1219 15.369 100.339 101.723 1.00 30.20 O
ATOM 27 O5' G A1219 16.860 100.897 99.811 1.00 27.41 O
TER
ATOM 1 O3' C B1044 24.745 91.098 105.648 1.00 25.97 O
ATOM 2 P A B1045 24.857 90.236 104.298 1.00 28.49 P
ATOM 3 OP1 A B1045 23.731 89.270 104.249 1.00 30.53 O
ATOM 4 OP2 A B1045 26.246 89.729 104.171 1.00 25.69 O
ATOM 5 O5' A B1045 24.648 91.308 103.145 1.00 27.56 O
ATOM 6 C5' A B1045 23.462 92.112 103.066 1.00 27.55 C
ATOM 7 C4' A B1045 23.649 93.171 102.010 1.00 30.08 C
ATOM 8 O4' A B1045 24.672 94.107 102.454 1.00 33.92 O
ATOM 9 C3' A B1045 24.166 92.650 100.675 1.00 29.19 C
ATOM 10 O3' A B1045 23.089 92.183 99.865 1.00 31.33 O
ATOM 11 C2' A B1045 24.856 93.878 100.094 1.00 30.34 C
ATOM 12 O2' A B1045 23.951 94.809 99.546 1.00 29.06 O
ATOM 13 C1' A B1045 25.475 94.504 101.349 1.00 32.65 C
ATOM 14 N9 A B1045 26.854 94.077 101.606 1.00 33.75 N
ATOM 15 C8 A B1045 27.263 93.023 102.385 1.00 34.45 C
ATOM 16 N7 A B1045 28.561 92.860 102.419 1.00 35.07 N
ATOM 17 C5 A B1045 29.045 93.882 101.618 1.00 33.43 C
ATOM 18 C6 A B1045 30.344 94.259 101.262 1.00 32.15 C
ATOM 19 N6 A B1045 31.435 93.630 101.694 1.00 29.40 N
ATOM 20 N1 A B1045 30.488 95.322 100.441 1.00 31.33 N
ATOM 21 C2 A B1045 29.393 95.959 100.025 1.00 28.94 C
ATOM 22 N3 A B1045 28.118 95.707 100.297 1.00 33.30 N
ATOM 23 C4 A B1045 28.007 94.640 101.109 1.00 33.30 C
ATOM 24 P G B1046 23.116 90.690 99.251 1.00 31.95 P
ATOM 25 OP1 G B1046 21.717 90.228 99.232 1.00 31.72 O
ATOM 26 OP2 G B1046 24.149 89.860 99.921 1.00 30.30 O
ATOM 27 O5' G B1046 23.574 90.906 97.741 1.00 31.36 O
TER
ATOM 2 P A A1218 16.588 103.284 107.256 1.00 33.71 P
ATOM 3 OP1 A A1218 16.851 104.604 106.616 1.00 34.26 O
ATOM 4 OP2 A A1218 15.192 102.775 107.321 1.00 34.17 O
ATOM 5 O5' A A1218 17.479 102.185 106.526 1.00 30.27 O
ATOM 6 C5' A A1218 17.068 101.630 105.267 1.00 29.43 C
ATOM 7 C4' A A1218 18.237 101.551 104.307 1.00 27.69 C
ATOM 8 O4' A A1218 19.300 100.742 104.871 1.00 28.59 O
ATOM 9 C3' A A1218 17.892 100.878 102.992 1.00 28.36 C
ATOM 10 O3' A A1218 17.359 101.845 102.094 1.00 26.88 O
ATOM 11 C2' A A1218 19.232 100.321 102.538 1.00 27.03 C
ATOM 12 O2' A A1218 20.054 101.316 101.974 1.00 29.93 O
ATOM 13 C1' A A1218 19.848 99.901 103.871 1.00 27.22 C
ATOM 14 N9 A A1218 19.554 98.520 104.246 1.00 28.53 N
ATOM 15 C8 A A1218 18.514 98.086 105.025 1.00 29.31 C
ATOM 16 N7 A A1218 18.493 96.791 105.206 1.00 30.74 N
ATOM 17 C5 A A1218 19.588 96.337 104.496 1.00 27.88 C
ATOM 18 C6 A A1218 20.101 95.055 104.288 1.00 28.87 C
ATOM 19 N6 A A1218 19.549 93.947 104.791 1.00 29.18 N
ATOM 20 N1 A A1218 21.215 94.941 103.531 1.00 29.82 N
ATOM 21 C2 A A1218 21.759 96.054 103.021 1.00 29.23 C
ATOM 22 N3 A A1218 21.361 97.317 103.142 1.00 28.95 N
ATOM 23 C4 A A1218 20.256 97.392 103.900 1.00 28.75 C
ATOM 24 P G A1219 16.146 101.456 101.118 1.00 26.13 P
ATOM 25 OP1 G A1219 15.462 102.725 100.774 1.00 27.79 O
ATOM 26 OP2 G A1219 15.369 100.339 101.723 1.00 30.20 O
ATOM 27 O5' G A1219 16.860 100.897 99.811 1.00 27.41 O
TER
ATOM 1 O3' C B1044 24.745 91.098 105.648 1.00 25.97 O
ATOM 2 P A B1045 24.857 90.236 104.298 1.00 28.49 P
ATOM 3 OP1 A B1045 23.731 89.270 104.249 1.00 30.53 O
ATOM 4 OP2 A B1045 26.246 89.729 104.171 1.00 25.69 O
ATOM 5 O5' A B1045 24.648 91.308 103.145 1.00 27.56 O
ATOM 6 C5' A B1045 23.462 92.112 103.066 1.00 27.55 C
ATOM 7 C4' A B1045 23.649 93.171 102.010 1.00 30.08 C
ATOM 8 O4' A B1045 24.672 94.107 102.454 1.00 33.92 O
ATOM 9 C3' A B1045 24.166 92.650 100.675 1.00 29.19 C
ATOM 10 O3' A B1045 23.089 92.183 99.865 1.00 31.33 O
ATOM 11 C2' A B1045 24.856 93.878 100.094 1.00 30.34 C
ATOM 12 O2' A B1045 23.951 94.809 99.546 1.00 29.06 O
ATOM 13 C1' A B1045 25.475 94.504 101.349 1.00 32.65 C
ATOM 14 N9 A B1045 26.854 94.077 101.606 1.00 33.75 N
ATOM 15 C8 A B1045 27.263 93.023 102.385 1.00 34.45 C
ATOM 16 N7 A B1045 28.561 92.860 102.419 1.00 35.07 N
ATOM 17 C5 A B1045 29.045 93.882 101.618 1.00 33.43 C
ATOM 18 C6 A B1045 30.344 94.259 101.262 1.00 32.15 C
ATOM 19 N6 A B1045 31.435 93.630 101.694 1.00 29.40 N
ATOM 20 N1 A B1045 30.488 95.322 100.441 1.00 31.33 N
ATOM 21 C2 A B1045 29.393 95.959 100.025 1.00 28.94 C
ATOM 22 N3 A B1045 28.118 95.707 100.297 1.00 33.30 N
ATOM 23 C4 A B1045 28.007 94.640 101.109 1.00 33.30 C
ATOM 24 P G B1046 23.116 90.690 99.251 1.00 31.95 P
ATOM 25 OP1 G B1046 21.717 90.228 99.232 1.00 31.72 O
ATOM 26 OP2 G B1046 24.149 89.860 99.921 1.00 30.30 O
ATOM 27 O5' G B1046 23.574 90.906 97.741 1.00 31.36 O
TER
Atoms:
OP1: (16.851,104.604,106.616)
OP2: (15.192,102.775,107.321)
C3': (17.892,100.878,102.992)
C1': (19.848,99.901,103.871)
C5': (17.068,101.630,105.267)
O4': (19.300,100.742,104.871)
C8: (18.514,98.086,105.025)
O2': (20.054,101.316,101.974)
C6: (20.101,95.055,104.288)
C5: (19.588,96.337,104.496)
C4: (20.256,97.392,103.900)
P: (16.588,103.284,107.256)
C4': (18.237,101.551,104.307)
C2': (19.232,100.321,102.538)
C2: (21.759,96.054,103.021)
N1: (21.215,94.941,103.531)
N3: (21.361,97.317,103.142)
N6: (19.549,93.947,104.791)
N7: (18.493,96.791,105.206)
N9: (19.554,98.520,104.246)
O5': (17.479,102.185,106.526)
O3': (17.359,101.845,102.094)
OP2: (15.192,102.775,107.321)
C3': (17.892,100.878,102.992)
C1': (19.848,99.901,103.871)
C5': (17.068,101.630,105.267)
O4': (19.300,100.742,104.871)
C8: (18.514,98.086,105.025)
O2': (20.054,101.316,101.974)
C6: (20.101,95.055,104.288)
C5: (19.588,96.337,104.496)
C4: (20.256,97.392,103.900)
P: (16.588,103.284,107.256)
C4': (18.237,101.551,104.307)
C2': (19.232,100.321,102.538)
C2: (21.759,96.054,103.021)
N1: (21.215,94.941,103.531)
N3: (21.361,97.317,103.142)
N6: (19.549,93.947,104.791)
N7: (18.493,96.791,105.206)
N9: (19.554,98.520,104.246)
O5': (17.479,102.185,106.526)
O3': (17.359,101.845,102.094)
OP1: (23.731,89.270,104.249)
OP2: (26.246,89.729,104.171)
C3': (24.166,92.650,100.675)
C1': (25.475,94.504,101.349)
C5': (23.462,92.112,103.066)
O4': (24.672,94.107,102.454)
C8: (27.263,93.023,102.385)
O2': (23.951,94.809,99.546)
C6: (30.344,94.259,101.262)
C5: (29.045,93.882,101.618)
C4: (28.007,94.640,101.109)
P: (24.857,90.236,104.298)
C4': (23.649,93.171,102.010)
C2': (24.856,93.878,100.094)
C2: (29.393,95.959,100.025)
N1: (30.488,95.322,100.441)
N3: (28.118,95.707,100.297)
N6: (31.435,93.630,101.694)
N7: (28.561,92.860,102.419)
N9: (26.854,94.077,101.606)
O5': (24.648,91.308,103.145)
O3': (23.089,92.183,99.865)
OP2: (26.246,89.729,104.171)
C3': (24.166,92.650,100.675)
C1': (25.475,94.504,101.349)
C5': (23.462,92.112,103.066)
O4': (24.672,94.107,102.454)
C8: (27.263,93.023,102.385)
O2': (23.951,94.809,99.546)
C6: (30.344,94.259,101.262)
C5: (29.045,93.882,101.618)
C4: (28.007,94.640,101.109)
P: (24.857,90.236,104.298)
C4': (23.649,93.171,102.010)
C2': (24.856,93.878,100.094)
C2: (29.393,95.959,100.025)
N1: (30.488,95.322,100.441)
N3: (28.118,95.707,100.297)
N6: (31.435,93.630,101.694)
N7: (28.561,92.860,102.419)
N9: (26.854,94.077,101.606)
O5': (24.648,91.308,103.145)
O3': (23.089,92.183,99.865)
Image (generated by PyMOL):