ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A1459:A1456

Extra

PDB:
ATOM 1 O3' C A1458 9.658 -1.045 -13.956 1.00194.79 O
ATOM 2 P A A1459 9.521 -2.598 -13.535 1.00197.08 P
ATOM 3 OP1 A A1459 10.211 -2.758 -12.228 1.00187.60 O
ATOM 4 OP2 A A1459 9.984 -3.411 -14.692 1.00186.18 O
ATOM 5 O5' A A1459 7.949 -2.776 -13.343 1.00184.78 O
ATOM 6 C5' A A1459 7.189 -3.598 -14.221 1.00177.01 C
ATOM 7 C4' A A1459 5.816 -3.019 -14.462 1.00176.36 C
ATOM 8 O4' A A1459 5.923 -1.857 -15.322 1.00177.81 O
ATOM 9 C3' A A1459 4.818 -3.924 -15.174 1.00171.41 C
ATOM 10 O3' A A1459 4.174 -4.831 -14.294 1.00172.88 O
ATOM 11 C2' A A1459 3.863 -2.927 -15.821 1.00170.88 C
ATOM 12 O2' A A1459 2.918 -2.449 -14.873 1.00170.96 O
ATOM 13 C1' A A1459 4.808 -1.783 -16.180 1.00173.35 C
ATOM 14 N9 A A1459 5.285 -1.879 -17.565 1.00169.20 N
ATOM 15 C8 A A1459 6.194 -2.763 -18.079 1.00170.04 C
ATOM 16 N7 A A1459 6.418 -2.589 -19.356 1.00170.72 N
ATOM 17 C5 A A1459 5.602 -1.521 -19.694 1.00171.85 C
ATOM 18 C6 A A1459 5.380 -0.850 -20.904 1.00174.04 C
ATOM 19 N6 A A1459 5.986 -1.170 -22.049 1.00172.86 N
ATOM 20 N1 A A1459 4.501 0.176 -20.895 1.00179.94 N
ATOM 21 C2 A A1459 3.896 0.497 -19.744 1.00180.99 C
ATOM 22 N3 A A1459 4.024 -0.060 -18.544 1.00176.47 N
ATOM 23 C4 A A1459 4.901 -1.072 -18.595 1.00171.51 C
ATOM 24 P A A1460 3.533 -6.200 -14.853 1.00172.87 P
ATOM 25 OP1 A A1460 2.840 -6.856 -13.711 1.00174.12 O
ATOM 26 OP2 A A1460 4.618 -6.937 -15.545 1.00170.80 O
ATOM 27 O5' A A1460 2.459 -5.687 -15.921 1.00147.08 O
TER

ATOM 1 O3' C B1455 1.557 8.606 -23.899 1.00169.21 O
ATOM 2 P A B1456 2.219 8.592 -22.440 1.00187.95 P
ATOM 3 OP1 A B1456 1.132 8.846 -21.465 1.00189.49 O
ATOM 4 OP2 A B1456 3.382 9.523 -22.474 1.00183.70 O
ATOM 5 O5' A B1456 2.730 7.091 -22.309 1.00188.95 O
ATOM 6 C5' A B1456 1.966 6.014 -22.835 1.00184.42 C
ATOM 7 C4' A B1456 2.797 4.763 -22.982 1.00187.63 C
ATOM 8 O4' A B1456 3.765 4.929 -24.052 1.00182.00 O
ATOM 9 C3' A B1456 3.644 4.369 -21.777 1.00193.23 C
ATOM 10 O3' A B1456 2.896 3.704 -20.766 1.00191.39 O
ATOM 11 C2' A B1456 4.723 3.493 -22.408 1.00190.27 C
ATOM 12 O2' A B1456 4.227 2.184 -22.642 1.00190.23 O
ATOM 13 C1' A B1456 4.929 4.177 -23.765 1.00183.53 C
ATOM 14 N9 A B1456 6.104 5.078 -23.768 1.00175.55 N
ATOM 15 C8 A B1456 6.144 6.436 -23.978 1.00179.38 C
ATOM 16 N7 A B1456 7.349 6.953 -23.921 1.00179.55 N
ATOM 17 C5 A B1456 8.165 5.862 -23.661 1.00177.79 C
ATOM 18 C6 A B1456 9.554 5.748 -23.486 1.00178.19 C
ATOM 19 N6 A B1456 10.397 6.779 -23.550 1.00177.97 N
ATOM 20 N1 A B1456 10.053 4.518 -23.240 1.00178.37 N
ATOM 21 C2 A B1456 9.200 3.487 -23.176 1.00175.85 C
ATOM 22 N3 A B1456 7.877 3.469 -23.323 1.00170.49 N
ATOM 23 C4 A B1456 7.413 4.703 -23.568 1.00173.43 C
ATOM 24 P A B1457 3.003 4.160 -19.223 1.00188.73 P
ATOM 25 OP1 A B1457 3.138 2.929 -18.411 1.00186.99 O
ATOM 26 OP2 A B1457 1.856 5.064 -18.957 1.00189.89 O
ATOM 27 O5' A B1457 4.368 4.984 -19.179 1.00191.19 O
TER

Atoms:
OP1: (10.211,-2.758,-12.228)
OP2: (9.984,-3.411,-14.692)
C3': (4.818,-3.924,-15.174)
C1': (4.808,-1.783,-16.180)
C5': (7.189,-3.598,-14.221)
O4': (5.923,-1.857,-15.322)
C8: (6.194,-2.763,-18.079)
O2': (2.918,-2.449,-14.873)
C6: (5.380,-0.850,-20.904)
C5: (5.602,-1.521,-19.694)
C4: (4.901,-1.072,-18.595)
P: (9.521,-2.598,-13.535)
C4': (5.816,-3.019,-14.462)
C2': (3.863,-2.927,-15.821)
C2: (3.896,0.497,-19.744)
N1: (4.501,0.176,-20.895)
N3: (4.024,-0.060,-18.544)
N6: (5.986,-1.170,-22.049)
N7: (6.418,-2.589,-19.356)
N9: (5.285,-1.879,-17.565)
O5': (7.949,-2.776,-13.343)
O3': (4.174,-4.831,-14.294)
OP1: (1.132,8.846,-21.465)
OP2: (3.382,9.523,-22.474)
C3': (3.644,4.369,-21.777)
C1': (4.929,4.177,-23.765)
C5': (1.966,6.014,-22.835)
O4': (3.765,4.929,-24.052)
C8: (6.144,6.436,-23.978)
O2': (4.227,2.184,-22.642)
C6: (9.554,5.748,-23.486)
C5: (8.165,5.862,-23.661)
C4: (7.413,4.703,-23.568)
P: (2.219,8.592,-22.440)
C4': (2.797,4.763,-22.982)
C2': (4.723,3.493,-22.408)
C2: (9.200,3.487,-23.176)
N1: (10.053,4.518,-23.240)
N3: (7.877,3.469,-23.323)
N6: (10.397,6.779,-23.550)
N7: (7.349,6.953,-23.921)
N9: (6.104,5.078,-23.768)
O5': (2.730,7.091,-22.309)
O3': (2.896,3.704,-20.766)
Image (generated by PyMOL):
PyMOL image
show in jmol