ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5F:61020:61785

Extra

PDB:
ATOM 1 O3' A A1019 233.070 8.195 219.563 1.00 46.66 O
ATOM 2 P A A1020 233.851 9.537 220.061 1.00 47.57 P
ATOM 3 OP1 A A1020 233.116 10.075 221.235 1.00 47.22 O
ATOM 4 OP2 A A1020 234.040 10.391 218.882 1.00 47.59 O
ATOM 5 O5' A A1020 235.241 8.999 220.539 1.00 47.91 O
ATOM 6 C5' A A1020 235.333 7.883 221.375 1.00 48.08 C
ATOM 7 C4' A A1020 236.272 6.907 220.794 1.00 48.55 C
ATOM 8 O4' A A1020 236.730 5.999 221.827 1.00 48.77 O
ATOM 9 C3' A A1020 235.690 6.045 219.700 1.00 48.72 C
ATOM 10 O3' A A1020 236.665 5.888 218.684 1.00 49.10 O
ATOM 11 C2' A A1020 235.457 4.714 220.423 1.00 48.90 C
ATOM 12 O2' A A1020 235.434 3.592 219.599 1.00 49.26 O
ATOM 13 C1' A A1020 236.644 4.685 221.344 1.00 49.10 C
ATOM 14 N9 A A1020 236.517 3.804 222.482 1.00 49.20 N
ATOM 15 C8 A A1020 235.539 3.824 223.420 1.00 48.92 C
ATOM 16 N7 A A1020 235.709 2.934 224.377 1.00 49.15 N
ATOM 17 C5 A A1020 236.899 2.322 224.051 1.00 49.59 C
ATOM 18 C6 A A1020 237.622 1.317 224.690 1.00 50.02 C
ATOM 19 N6 A A1020 237.190 0.758 225.819 1.00 50.05 N
ATOM 20 N1 A A1020 238.790 0.923 224.129 1.00 50.45 N
ATOM 21 C2 A A1020 239.187 1.516 223.005 1.00 50.45 C
ATOM 22 N3 A A1020 238.585 2.490 222.307 1.00 50.07 N
ATOM 23 C4 A A1020 237.425 2.858 222.891 1.00 49.64 C
ATOM 24 P A A1021 236.189 5.577 217.210 1.00 49.24 P
ATOM 25 OP1 A A1021 235.505 4.287 217.264 1.00 49.38 O
ATOM 26 OP2 A A1021 237.351 5.729 216.274 1.00 49.63 O
ATOM 27 O5' A A1021 235.124 6.720 216.958 1.00 48.78 O
TER

ATOM 1 O3' A B1784 241.018 1.550 217.627 1.00 53.31 O
ATOM 2 P A B1785 242.178 0.468 217.430 1.00 52.38 P
ATOM 3 OP1 A B1785 243.365 1.196 216.876 1.00 52.65 O
ATOM 4 OP2 A B1785 241.597 -0.653 216.646 1.00 52.60 O
ATOM 5 O5' A B1785 242.470 -0.013 218.915 1.00 52.45 O
ATOM 6 C5' A B1785 242.895 0.890 219.927 1.00 52.23 C
ATOM 7 C4' A B1785 242.901 0.221 221.275 1.00 52.29 C
ATOM 8 O4' A B1785 241.583 -0.364 221.495 1.00 51.99 O
ATOM 9 C3' A B1785 243.916 -0.919 221.426 1.00 52.97 C
ATOM 10 O3' A B1785 244.498 -0.921 222.749 1.00 53.07 O
ATOM 11 C2' A B1785 243.059 -2.164 221.222 1.00 53.06 C
ATOM 12 O2' A B1785 243.527 -3.323 221.861 1.00 53.54 O
ATOM 13 C1' A B1785 241.699 -1.739 221.763 1.00 52.41 C
ATOM 14 N9 A B1785 240.604 -2.468 221.111 1.00 52.32 N
ATOM 15 C8 A B1785 240.222 -2.510 219.802 1.00 52.33 C
ATOM 16 N7 A B1785 239.289 -3.391 219.534 1.00 52.32 N
ATOM 17 C5 A B1785 239.055 -3.994 220.742 1.00 52.31 C
ATOM 18 C6 A B1785 238.212 -5.036 221.132 1.00 52.33 C
ATOM 19 N6 A B1785 237.355 -5.666 220.319 1.00 52.33 N
ATOM 20 N1 A B1785 238.244 -5.417 222.411 1.00 52.36 N
ATOM 21 C2 A B1785 239.072 -4.785 223.235 1.00 52.37 C
ATOM 22 N3 A B1785 239.925 -3.811 223.001 1.00 52.36 N
ATOM 23 C4 A B1785 239.861 -3.456 221.709 1.00 52.33 C
ATOM 24 P G B1786 245.931 -0.177 223.013 1.00 54.05 P
ATOM 25 OP1 G B1786 245.948 1.050 222.143 1.00 53.76 O
ATOM 26 OP2 G B1786 247.002 -1.186 222.841 1.00 54.77 O
ATOM 27 O5' G B1786 245.827 0.239 224.549 1.00 53.78 O
TER

Atoms:
OP1: (233.116,10.075,221.235)
OP2: (234.040,10.391,218.882)
C3': (235.690,6.045,219.700)
C1': (236.644,4.685,221.344)
C5': (235.333,7.883,221.375)
O4': (236.730,5.999,221.827)
C8: (235.539,3.824,223.420)
O2': (235.434,3.592,219.599)
C6: (237.622,1.317,224.690)
C5: (236.899,2.322,224.051)
C4: (237.425,2.858,222.891)
P: (233.851,9.537,220.061)
C4': (236.272,6.907,220.794)
C2': (235.457,4.714,220.423)
C2: (239.187,1.516,223.005)
N1: (238.790,0.923,224.129)
N3: (238.585,2.490,222.307)
N6: (237.190,0.758,225.819)
N7: (235.709,2.934,224.377)
N9: (236.517,3.804,222.482)
O5': (235.241,8.999,220.539)
O3': (236.665,5.888,218.684)
OP1: (243.365,1.196,216.876)
OP2: (241.597,-0.653,216.646)
C3': (243.916,-0.919,221.426)
C1': (241.699,-1.739,221.763)
C5': (242.895,0.890,219.927)
O4': (241.583,-0.364,221.495)
C8: (240.222,-2.510,219.802)
O2': (243.527,-3.323,221.861)
C6: (238.212,-5.036,221.132)
C5: (239.055,-3.994,220.742)
C4: (239.861,-3.456,221.709)
P: (242.178,0.468,217.430)
C4': (242.901,0.221,221.275)
C2': (243.059,-2.164,221.222)
C2: (239.072,-4.785,223.235)
N1: (238.244,-5.417,222.411)
N3: (239.925,-3.811,223.001)
N6: (237.355,-5.666,220.319)
N7: (239.289,-3.391,219.534)
N9: (240.604,-2.468,221.111)
O5': (242.470,-0.013,218.915)
O3': (244.498,-0.921,222.749)
Image (generated by PyMOL):
PyMOL image
show in jmol