Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1IL2:D57:D55
Extra
PDB:
ATOM 1 O3' U A 56 34.491 -40.290 5.752 1.00 42.01 O
ATOM 2 P U A 57 36.026 -40.444 6.193 1.00 46.39 P
ATOM 3 OP1 U A 57 36.661 -39.100 6.124 1.00 47.36 O
ATOM 4 OP2 U A 57 36.633 -41.586 5.455 1.00 41.84 O
ATOM 5 O5' U A 57 35.931 -40.836 7.724 1.00 36.90 O
ATOM 6 C5' U A 57 35.032 -40.156 8.585 1.00 38.15 C
ATOM 7 C4' U A 57 34.865 -40.945 9.846 1.00 45.25 C
ATOM 8 O4' U A 57 34.177 -42.179 9.527 1.00 48.81 O
ATOM 9 C3' U A 57 36.181 -41.332 10.499 1.00 46.20 C
ATOM 10 O3' U A 57 36.002 -41.312 11.900 1.00 48.26 O
ATOM 11 C2' U A 57 36.405 -42.761 10.020 1.00 48.70 C
ATOM 12 O2' U A 57 37.118 -43.555 10.947 1.00 49.03 O
ATOM 13 C1' U A 57 34.977 -43.279 9.892 1.00 50.56 C
ATOM 14 N1 U A 57 34.841 -44.294 8.842 1.00 57.21 N
ATOM 15 C2 U A 57 34.262 -45.503 9.187 1.00 58.49 C
ATOM 16 O2 U A 57 33.864 -45.752 10.319 1.00 55.30 O
ATOM 17 N3 U A 57 34.161 -46.406 8.159 1.00 56.30 N
ATOM 18 C4 U A 57 34.581 -46.228 6.854 1.00 60.55 C
ATOM 19 O4 U A 57 34.438 -47.144 6.043 1.00 64.88 O
ATOM 20 C5 U A 57 35.172 -44.953 6.582 1.00 59.92 C
ATOM 21 C6 U A 57 35.281 -44.054 7.562 1.00 56.69 C
ATOM 22 P C A 58 36.682 -40.148 12.770 1.00 50.20 P
ATOM 23 OP1 C A 58 36.395 -40.466 14.193 1.00 46.33 O
ATOM 24 OP2 C A 58 36.252 -38.840 12.203 1.00 51.53 O
ATOM 25 O5' C A 58 38.247 -40.297 12.502 1.00 43.24 O
TER
ATOM 1 O3' A B 54 40.170 -48.134 0.679 1.00 48.20 O
ATOM 2 P A B 55 40.245 -46.531 0.640 1.00 47.08 P
ATOM 3 OP1 A B 55 39.419 -46.024 -0.482 1.00 49.84 O
ATOM 4 OP2 A B 55 41.697 -46.223 0.685 1.00 49.78 O
ATOM 5 O5' A B 55 39.560 -46.073 2.006 1.00 44.27 O
ATOM 6 C5' A B 55 38.286 -46.615 2.396 1.00 44.55 C
ATOM 7 C4' A B 55 37.535 -45.634 3.256 1.00 43.97 C
ATOM 8 O4' A B 55 38.215 -45.505 4.531 1.00 41.99 O
ATOM 9 C3' A B 55 37.399 -44.229 2.680 1.00 45.51 C
ATOM 10 O3' A B 55 36.145 -43.687 3.074 1.00 49.13 O
ATOM 11 C2' A B 55 38.499 -43.460 3.400 1.00 46.12 C
ATOM 12 O2' A B 55 38.200 -42.087 3.544 1.00 43.94 O
ATOM 13 C1' A B 55 38.521 -44.151 4.763 1.00 41.22 C
ATOM 14 N9 A B 55 39.831 -44.091 5.407 1.00 33.74 N
ATOM 15 C8 A B 55 41.052 -43.913 4.814 1.00 36.45 C
ATOM 16 N7 A B 55 42.053 -43.891 5.663 1.00 36.18 N
ATOM 17 C5 A B 55 41.436 -44.071 6.897 1.00 28.59 C
ATOM 18 C6 A B 55 41.957 -44.132 8.204 1.00 29.72 C
ATOM 19 N6 A B 55 43.248 -44.032 8.495 1.00 31.52 N
ATOM 20 N1 A B 55 41.077 -44.312 9.212 1.00 32.50 N
ATOM 21 C2 A B 55 39.775 -44.419 8.919 1.00 33.51 C
ATOM 22 N3 A B 55 39.173 -44.374 7.730 1.00 29.18 N
ATOM 23 C4 A B 55 40.073 -44.195 6.754 1.00 26.23 C
ATOM 24 P U B 56 35.056 -43.290 1.963 1.00 52.13 P
ATOM 25 OP1 U B 56 34.659 -44.520 1.232 1.00 52.80 O
ATOM 26 OP2 U B 56 35.566 -42.121 1.206 1.00 56.19 O
ATOM 27 O5' U B 56 33.811 -42.812 2.833 1.00 52.68 O
TER
ATOM 2 P U A 57 36.026 -40.444 6.193 1.00 46.39 P
ATOM 3 OP1 U A 57 36.661 -39.100 6.124 1.00 47.36 O
ATOM 4 OP2 U A 57 36.633 -41.586 5.455 1.00 41.84 O
ATOM 5 O5' U A 57 35.931 -40.836 7.724 1.00 36.90 O
ATOM 6 C5' U A 57 35.032 -40.156 8.585 1.00 38.15 C
ATOM 7 C4' U A 57 34.865 -40.945 9.846 1.00 45.25 C
ATOM 8 O4' U A 57 34.177 -42.179 9.527 1.00 48.81 O
ATOM 9 C3' U A 57 36.181 -41.332 10.499 1.00 46.20 C
ATOM 10 O3' U A 57 36.002 -41.312 11.900 1.00 48.26 O
ATOM 11 C2' U A 57 36.405 -42.761 10.020 1.00 48.70 C
ATOM 12 O2' U A 57 37.118 -43.555 10.947 1.00 49.03 O
ATOM 13 C1' U A 57 34.977 -43.279 9.892 1.00 50.56 C
ATOM 14 N1 U A 57 34.841 -44.294 8.842 1.00 57.21 N
ATOM 15 C2 U A 57 34.262 -45.503 9.187 1.00 58.49 C
ATOM 16 O2 U A 57 33.864 -45.752 10.319 1.00 55.30 O
ATOM 17 N3 U A 57 34.161 -46.406 8.159 1.00 56.30 N
ATOM 18 C4 U A 57 34.581 -46.228 6.854 1.00 60.55 C
ATOM 19 O4 U A 57 34.438 -47.144 6.043 1.00 64.88 O
ATOM 20 C5 U A 57 35.172 -44.953 6.582 1.00 59.92 C
ATOM 21 C6 U A 57 35.281 -44.054 7.562 1.00 56.69 C
ATOM 22 P C A 58 36.682 -40.148 12.770 1.00 50.20 P
ATOM 23 OP1 C A 58 36.395 -40.466 14.193 1.00 46.33 O
ATOM 24 OP2 C A 58 36.252 -38.840 12.203 1.00 51.53 O
ATOM 25 O5' C A 58 38.247 -40.297 12.502 1.00 43.24 O
TER
ATOM 1 O3' A B 54 40.170 -48.134 0.679 1.00 48.20 O
ATOM 2 P A B 55 40.245 -46.531 0.640 1.00 47.08 P
ATOM 3 OP1 A B 55 39.419 -46.024 -0.482 1.00 49.84 O
ATOM 4 OP2 A B 55 41.697 -46.223 0.685 1.00 49.78 O
ATOM 5 O5' A B 55 39.560 -46.073 2.006 1.00 44.27 O
ATOM 6 C5' A B 55 38.286 -46.615 2.396 1.00 44.55 C
ATOM 7 C4' A B 55 37.535 -45.634 3.256 1.00 43.97 C
ATOM 8 O4' A B 55 38.215 -45.505 4.531 1.00 41.99 O
ATOM 9 C3' A B 55 37.399 -44.229 2.680 1.00 45.51 C
ATOM 10 O3' A B 55 36.145 -43.687 3.074 1.00 49.13 O
ATOM 11 C2' A B 55 38.499 -43.460 3.400 1.00 46.12 C
ATOM 12 O2' A B 55 38.200 -42.087 3.544 1.00 43.94 O
ATOM 13 C1' A B 55 38.521 -44.151 4.763 1.00 41.22 C
ATOM 14 N9 A B 55 39.831 -44.091 5.407 1.00 33.74 N
ATOM 15 C8 A B 55 41.052 -43.913 4.814 1.00 36.45 C
ATOM 16 N7 A B 55 42.053 -43.891 5.663 1.00 36.18 N
ATOM 17 C5 A B 55 41.436 -44.071 6.897 1.00 28.59 C
ATOM 18 C6 A B 55 41.957 -44.132 8.204 1.00 29.72 C
ATOM 19 N6 A B 55 43.248 -44.032 8.495 1.00 31.52 N
ATOM 20 N1 A B 55 41.077 -44.312 9.212 1.00 32.50 N
ATOM 21 C2 A B 55 39.775 -44.419 8.919 1.00 33.51 C
ATOM 22 N3 A B 55 39.173 -44.374 7.730 1.00 29.18 N
ATOM 23 C4 A B 55 40.073 -44.195 6.754 1.00 26.23 C
ATOM 24 P U B 56 35.056 -43.290 1.963 1.00 52.13 P
ATOM 25 OP1 U B 56 34.659 -44.520 1.232 1.00 52.80 O
ATOM 26 OP2 U B 56 35.566 -42.121 1.206 1.00 56.19 O
ATOM 27 O5' U B 56 33.811 -42.812 2.833 1.00 52.68 O
TER
Atoms:
C4: (34.581,-46.228,6.854)
N3: (34.161,-46.406,8.159)
OP1: (36.661,-39.100,6.124)
OP2: (36.633,-41.586,5.455)
C2: (34.262,-45.503,9.187)
C1': (34.977,-43.279,9.892)
C3': (36.181,-41.332,10.499)
O5': (35.931,-40.836,7.724)
O4': (34.177,-42.179,9.527)
C5': (35.032,-40.156,8.585)
P: (36.026,-40.444,6.193)
C4': (34.865,-40.945,9.846)
C2': (36.405,-42.761,10.020)
O2': (37.118,-43.555,10.947)
N1: (34.841,-44.294,8.842)
O4: (34.438,-47.144,6.043)
O2: (33.864,-45.752,10.319)
C6: (35.281,-44.054,7.562)
C5: (35.172,-44.953,6.582)
O3': (36.002,-41.312,11.900)
N3: (34.161,-46.406,8.159)
OP1: (36.661,-39.100,6.124)
OP2: (36.633,-41.586,5.455)
C2: (34.262,-45.503,9.187)
C1': (34.977,-43.279,9.892)
C3': (36.181,-41.332,10.499)
O5': (35.931,-40.836,7.724)
O4': (34.177,-42.179,9.527)
C5': (35.032,-40.156,8.585)
P: (36.026,-40.444,6.193)
C4': (34.865,-40.945,9.846)
C2': (36.405,-42.761,10.020)
O2': (37.118,-43.555,10.947)
N1: (34.841,-44.294,8.842)
O4: (34.438,-47.144,6.043)
O2: (33.864,-45.752,10.319)
C6: (35.281,-44.054,7.562)
C5: (35.172,-44.953,6.582)
O3': (36.002,-41.312,11.900)
OP1: (39.419,-46.024,-0.482)
OP2: (41.697,-46.223,0.685)
C3': (37.399,-44.229,2.680)
C1': (38.521,-44.151,4.763)
C5': (38.286,-46.615,2.396)
O4': (38.215,-45.505,4.531)
C8: (41.052,-43.913,4.814)
O2': (38.200,-42.087,3.544)
C6: (41.957,-44.132,8.204)
C5: (41.436,-44.071,6.897)
C4: (40.073,-44.195,6.754)
P: (40.245,-46.531,0.640)
C4': (37.535,-45.634,3.256)
C2': (38.499,-43.460,3.400)
C2: (39.775,-44.419,8.919)
N1: (41.077,-44.312,9.212)
N3: (39.173,-44.374,7.730)
N6: (43.248,-44.032,8.495)
N7: (42.053,-43.891,5.663)
N9: (39.831,-44.091,5.407)
O5': (39.560,-46.073,2.006)
O3': (36.145,-43.687,3.074)
OP2: (41.697,-46.223,0.685)
C3': (37.399,-44.229,2.680)
C1': (38.521,-44.151,4.763)
C5': (38.286,-46.615,2.396)
O4': (38.215,-45.505,4.531)
C8: (41.052,-43.913,4.814)
O2': (38.200,-42.087,3.544)
C6: (41.957,-44.132,8.204)
C5: (41.436,-44.071,6.897)
C4: (40.073,-44.195,6.754)
P: (40.245,-46.531,0.640)
C4': (37.535,-45.634,3.256)
C2': (38.499,-43.460,3.400)
C2: (39.775,-44.419,8.919)
N1: (41.077,-44.312,9.212)
N3: (39.173,-44.374,7.730)
N6: (43.248,-44.032,8.495)
N7: (42.053,-43.891,5.663)
N9: (39.831,-44.091,5.407)
O5': (39.560,-46.073,2.006)
O3': (36.145,-43.687,3.074)
Image (generated by PyMOL):