Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1247:A1245
Extra
PDB:
ATOM 1 O3' A A1246 16.355 85.716 91.375 1.00 43.70 O
ATOM 2 P U A1247 17.053 86.112 89.987 1.00 43.94 P
ATOM 3 OP1 U A1247 18.076 87.144 90.294 1.00 44.56 O
ATOM 4 OP2 U A1247 15.995 86.410 88.995 1.00 42.74 O
ATOM 5 O5' U A1247 17.793 84.772 89.534 1.00 43.48 O
ATOM 6 C5' U A1247 19.064 84.418 90.101 1.00 41.71 C
ATOM 7 C4' U A1247 19.518 83.060 89.619 1.00 42.71 C
ATOM 8 O4' U A1247 18.503 82.074 89.949 1.00 42.68 O
ATOM 9 C3' U A1247 19.714 82.870 88.125 1.00 42.91 C
ATOM 10 O3' U A1247 20.958 83.387 87.655 1.00 45.90 O
ATOM 11 C2' U A1247 19.631 81.353 88.007 1.00 42.08 C
ATOM 12 O2' U A1247 20.773 80.722 88.536 1.00 41.86 O
ATOM 13 C1' U A1247 18.470 81.057 88.953 1.00 41.28 C
ATOM 14 N1 U A1247 17.161 81.126 88.282 1.00 39.82 N
ATOM 15 C2 U A1247 16.796 80.094 87.437 1.00 38.46 C
ATOM 16 O2 U A1247 17.518 79.152 87.172 1.00 37.88 O
ATOM 17 N3 U A1247 15.539 80.211 86.901 1.00 39.63 N
ATOM 18 C4 U A1247 14.619 81.229 87.116 1.00 40.40 C
ATOM 19 O4 U A1247 13.438 81.050 86.807 1.00 40.52 O
ATOM 20 C5 U A1247 15.096 82.281 87.954 1.00 40.19 C
ATOM 21 C6 U A1247 16.312 82.197 88.498 1.00 39.29 C
ATOM 22 P C A1248 20.975 84.442 86.429 1.00 47.25 P
ATOM 23 OP1 C A1248 19.897 83.963 85.530 1.00 46.07 O
ATOM 24 OP2 C A1248 22.347 84.574 85.894 1.00 46.68 O
ATOM 25 O5' C A1248 20.618 85.837 87.130 1.00 46.40 O
TER
ATOM 1 O3' U B1244 8.588 83.277 84.563 1.00 45.51 O
ATOM 2 P A B1245 9.033 84.194 85.803 1.00 44.73 P
ATOM 3 OP1 A B1245 8.973 83.419 87.060 1.00 40.32 O
ATOM 4 OP2 A B1245 8.312 85.498 85.696 1.00 44.17 O
ATOM 5 O5' A B1245 10.557 84.476 85.479 1.00 44.87 O
ATOM 6 C5' A B1245 11.565 83.494 85.733 1.00 44.41 C
ATOM 7 C4' A B1245 12.915 84.150 85.713 1.00 44.08 C
ATOM 8 O4' A B1245 13.203 84.634 84.374 1.00 44.52 O
ATOM 9 C3' A B1245 13.020 85.405 86.552 1.00 43.36 C
ATOM 10 O3' A B1245 13.171 85.103 87.915 1.00 43.38 O
ATOM 11 C2' A B1245 14.254 86.045 85.950 1.00 44.90 C
ATOM 12 O2' A B1245 15.425 85.343 86.320 1.00 46.28 O
ATOM 13 C1' A B1245 14.003 85.799 84.462 1.00 45.33 C
ATOM 14 N9 A B1245 13.309 86.916 83.815 1.00 45.60 N
ATOM 15 C8 A B1245 11.987 87.295 83.886 1.00 46.06 C
ATOM 16 N7 A B1245 11.708 88.366 83.186 1.00 45.25 N
ATOM 17 C5 A B1245 12.925 88.717 82.617 1.00 45.94 C
ATOM 18 C6 A B1245 13.304 89.772 81.765 1.00 45.94 C
ATOM 19 N6 A B1245 12.462 90.704 81.314 1.00 45.06 N
ATOM 20 N1 A B1245 14.595 89.837 81.386 1.00 45.36 N
ATOM 21 C2 A B1245 15.438 88.898 81.832 1.00 45.51 C
ATOM 22 N3 A B1245 15.202 87.858 82.631 1.00 45.42 N
ATOM 23 C4 A B1245 13.914 87.829 82.992 1.00 46.06 C
ATOM 24 P A B1246 12.004 85.476 88.940 1.00 43.78 P
ATOM 25 OP1 A B1246 10.877 84.605 88.569 1.00 46.97 O
ATOM 26 OP2 A B1246 11.816 86.947 88.937 1.00 43.61 O
ATOM 27 O5' A B1246 12.564 84.940 90.335 1.00 44.04 O
TER
ATOM 2 P U A1247 17.053 86.112 89.987 1.00 43.94 P
ATOM 3 OP1 U A1247 18.076 87.144 90.294 1.00 44.56 O
ATOM 4 OP2 U A1247 15.995 86.410 88.995 1.00 42.74 O
ATOM 5 O5' U A1247 17.793 84.772 89.534 1.00 43.48 O
ATOM 6 C5' U A1247 19.064 84.418 90.101 1.00 41.71 C
ATOM 7 C4' U A1247 19.518 83.060 89.619 1.00 42.71 C
ATOM 8 O4' U A1247 18.503 82.074 89.949 1.00 42.68 O
ATOM 9 C3' U A1247 19.714 82.870 88.125 1.00 42.91 C
ATOM 10 O3' U A1247 20.958 83.387 87.655 1.00 45.90 O
ATOM 11 C2' U A1247 19.631 81.353 88.007 1.00 42.08 C
ATOM 12 O2' U A1247 20.773 80.722 88.536 1.00 41.86 O
ATOM 13 C1' U A1247 18.470 81.057 88.953 1.00 41.28 C
ATOM 14 N1 U A1247 17.161 81.126 88.282 1.00 39.82 N
ATOM 15 C2 U A1247 16.796 80.094 87.437 1.00 38.46 C
ATOM 16 O2 U A1247 17.518 79.152 87.172 1.00 37.88 O
ATOM 17 N3 U A1247 15.539 80.211 86.901 1.00 39.63 N
ATOM 18 C4 U A1247 14.619 81.229 87.116 1.00 40.40 C
ATOM 19 O4 U A1247 13.438 81.050 86.807 1.00 40.52 O
ATOM 20 C5 U A1247 15.096 82.281 87.954 1.00 40.19 C
ATOM 21 C6 U A1247 16.312 82.197 88.498 1.00 39.29 C
ATOM 22 P C A1248 20.975 84.442 86.429 1.00 47.25 P
ATOM 23 OP1 C A1248 19.897 83.963 85.530 1.00 46.07 O
ATOM 24 OP2 C A1248 22.347 84.574 85.894 1.00 46.68 O
ATOM 25 O5' C A1248 20.618 85.837 87.130 1.00 46.40 O
TER
ATOM 1 O3' U B1244 8.588 83.277 84.563 1.00 45.51 O
ATOM 2 P A B1245 9.033 84.194 85.803 1.00 44.73 P
ATOM 3 OP1 A B1245 8.973 83.419 87.060 1.00 40.32 O
ATOM 4 OP2 A B1245 8.312 85.498 85.696 1.00 44.17 O
ATOM 5 O5' A B1245 10.557 84.476 85.479 1.00 44.87 O
ATOM 6 C5' A B1245 11.565 83.494 85.733 1.00 44.41 C
ATOM 7 C4' A B1245 12.915 84.150 85.713 1.00 44.08 C
ATOM 8 O4' A B1245 13.203 84.634 84.374 1.00 44.52 O
ATOM 9 C3' A B1245 13.020 85.405 86.552 1.00 43.36 C
ATOM 10 O3' A B1245 13.171 85.103 87.915 1.00 43.38 O
ATOM 11 C2' A B1245 14.254 86.045 85.950 1.00 44.90 C
ATOM 12 O2' A B1245 15.425 85.343 86.320 1.00 46.28 O
ATOM 13 C1' A B1245 14.003 85.799 84.462 1.00 45.33 C
ATOM 14 N9 A B1245 13.309 86.916 83.815 1.00 45.60 N
ATOM 15 C8 A B1245 11.987 87.295 83.886 1.00 46.06 C
ATOM 16 N7 A B1245 11.708 88.366 83.186 1.00 45.25 N
ATOM 17 C5 A B1245 12.925 88.717 82.617 1.00 45.94 C
ATOM 18 C6 A B1245 13.304 89.772 81.765 1.00 45.94 C
ATOM 19 N6 A B1245 12.462 90.704 81.314 1.00 45.06 N
ATOM 20 N1 A B1245 14.595 89.837 81.386 1.00 45.36 N
ATOM 21 C2 A B1245 15.438 88.898 81.832 1.00 45.51 C
ATOM 22 N3 A B1245 15.202 87.858 82.631 1.00 45.42 N
ATOM 23 C4 A B1245 13.914 87.829 82.992 1.00 46.06 C
ATOM 24 P A B1246 12.004 85.476 88.940 1.00 43.78 P
ATOM 25 OP1 A B1246 10.877 84.605 88.569 1.00 46.97 O
ATOM 26 OP2 A B1246 11.816 86.947 88.937 1.00 43.61 O
ATOM 27 O5' A B1246 12.564 84.940 90.335 1.00 44.04 O
TER
Atoms:
C4: (14.619,81.229,87.116)
N3: (15.539,80.211,86.901)
OP1: (18.076,87.144,90.294)
OP2: (15.995,86.410,88.995)
C2: (16.796,80.094,87.437)
C1': (18.470,81.057,88.953)
C3': (19.714,82.870,88.125)
O5': (17.793,84.772,89.534)
O4': (18.503,82.074,89.949)
C5': (19.064,84.418,90.101)
P: (17.053,86.112,89.987)
C4': (19.518,83.060,89.619)
C2': (19.631,81.353,88.007)
O2': (20.773,80.722,88.536)
N1: (17.161,81.126,88.282)
O4: (13.438,81.050,86.807)
O2: (17.518,79.152,87.172)
C6: (16.312,82.197,88.498)
C5: (15.096,82.281,87.954)
O3': (20.958,83.387,87.655)
N3: (15.539,80.211,86.901)
OP1: (18.076,87.144,90.294)
OP2: (15.995,86.410,88.995)
C2: (16.796,80.094,87.437)
C1': (18.470,81.057,88.953)
C3': (19.714,82.870,88.125)
O5': (17.793,84.772,89.534)
O4': (18.503,82.074,89.949)
C5': (19.064,84.418,90.101)
P: (17.053,86.112,89.987)
C4': (19.518,83.060,89.619)
C2': (19.631,81.353,88.007)
O2': (20.773,80.722,88.536)
N1: (17.161,81.126,88.282)
O4: (13.438,81.050,86.807)
O2: (17.518,79.152,87.172)
C6: (16.312,82.197,88.498)
C5: (15.096,82.281,87.954)
O3': (20.958,83.387,87.655)
OP1: (8.973,83.419,87.060)
OP2: (8.312,85.498,85.696)
C3': (13.020,85.405,86.552)
C1': (14.003,85.799,84.462)
C5': (11.565,83.494,85.733)
O4': (13.203,84.634,84.374)
C8: (11.987,87.295,83.886)
O2': (15.425,85.343,86.320)
C6: (13.304,89.772,81.765)
C5: (12.925,88.717,82.617)
C4: (13.914,87.829,82.992)
P: (9.033,84.194,85.803)
C4': (12.915,84.150,85.713)
C2': (14.254,86.045,85.950)
C2: (15.438,88.898,81.832)
N1: (14.595,89.837,81.386)
N3: (15.202,87.858,82.631)
N6: (12.462,90.704,81.314)
N7: (11.708,88.366,83.186)
N9: (13.309,86.916,83.815)
O5': (10.557,84.476,85.479)
O3': (13.171,85.103,87.915)
OP2: (8.312,85.498,85.696)
C3': (13.020,85.405,86.552)
C1': (14.003,85.799,84.462)
C5': (11.565,83.494,85.733)
O4': (13.203,84.634,84.374)
C8: (11.987,87.295,83.886)
O2': (15.425,85.343,86.320)
C6: (13.304,89.772,81.765)
C5: (12.925,88.717,82.617)
C4: (13.914,87.829,82.992)
P: (9.033,84.194,85.803)
C4': (12.915,84.150,85.713)
C2': (14.254,86.045,85.950)
C2: (15.438,88.898,81.832)
N1: (14.595,89.837,81.386)
N3: (15.202,87.858,82.631)
N6: (12.462,90.704,81.314)
N7: (11.708,88.366,83.186)
N9: (13.309,86.916,83.815)
O5': (10.557,84.476,85.479)
O3': (13.171,85.103,87.915)
Image (generated by PyMOL):