Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2491:A2490
Extra
PDB:
ATOM 1 O3' A A2490 48.230 142.555 99.764 1.00 39.52 O
ATOM 2 P U A2491 47.064 143.383 99.057 1.00 39.31 P
ATOM 3 OP1 U A2491 47.674 144.227 98.011 1.00 41.23 O
ATOM 4 OP2 U A2491 46.252 144.002 100.109 1.00 37.85 O
ATOM 5 O5' U A2491 46.233 142.234 98.341 1.00 38.93 O
ATOM 6 C5' U A2491 45.009 142.501 97.646 1.00 38.01 C
ATOM 7 C4' U A2491 44.244 141.213 97.464 1.00 36.77 C
ATOM 8 O4' U A2491 45.052 140.273 96.705 1.00 35.43 O
ATOM 9 C3' U A2491 43.945 140.499 98.768 1.00 34.59 C
ATOM 10 O3' U A2491 42.713 140.953 99.289 1.00 32.49 O
ATOM 11 C2' U A2491 43.859 139.048 98.341 1.00 34.76 C
ATOM 12 O2' U A2491 42.625 138.751 97.744 1.00 35.60 O
ATOM 13 C1' U A2491 44.946 138.980 97.275 1.00 34.97 C
ATOM 14 N1 U A2491 46.238 138.628 97.873 1.00 35.41 N
ATOM 15 C2 U A2491 46.356 137.406 98.490 1.00 36.19 C
ATOM 16 O2 U A2491 45.432 136.601 98.573 1.00 37.49 O
ATOM 17 N3 U A2491 47.596 137.148 99.012 1.00 36.65 N
ATOM 18 C4 U A2491 48.703 137.961 98.973 1.00 36.08 C
ATOM 19 O4 U A2491 49.777 137.548 99.411 1.00 35.93 O
ATOM 20 C5 U A2491 48.492 139.204 98.332 1.00 35.84 C
ATOM 21 C6 U A2491 47.297 139.489 97.820 1.00 35.96 C
ATOM 22 P C A2492 42.474 140.956 100.864 1.00 33.24 P
ATOM 23 OP1 C A2492 41.137 141.538 101.106 1.00 32.77 O
ATOM 24 OP2 C A2492 43.678 141.600 101.447 1.00 31.64 O
ATOM 25 O5' C A2492 42.406 139.411 101.247 1.00 30.76 O
TER
ATOM 1 O3' U B2489 53.322 146.041 98.014 1.00 33.68 O
ATOM 2 P A B2490 52.514 145.366 99.200 1.00 34.44 P
ATOM 3 OP1 A B2490 51.662 146.381 99.858 1.00 37.45 O
ATOM 4 OP2 A B2490 53.489 144.615 99.996 1.00 35.90 O
ATOM 5 O5' A B2490 51.557 144.386 98.399 1.00 36.38 O
ATOM 6 C5' A B2490 51.707 142.982 98.456 1.00 36.92 C
ATOM 7 C4' A B2490 50.379 142.350 98.747 1.00 38.47 C
ATOM 8 O4' A B2490 50.638 141.062 99.336 1.00 40.67 O
ATOM 9 C3' A B2490 49.552 143.070 99.801 1.00 40.39 C
ATOM 10 O3' A B2490 48.230 142.555 99.764 1.00 39.52 O
ATOM 11 C2' A B2490 50.214 142.612 101.089 1.00 41.71 C
ATOM 12 O2' A B2490 49.309 142.675 102.168 1.00 43.44 O
ATOM 13 C1' A B2490 50.568 141.160 100.747 1.00 41.23 C
ATOM 14 N9 A B2490 51.867 140.749 101.274 1.00 40.84 N
ATOM 15 C8 A B2490 53.104 141.262 100.981 1.00 40.23 C
ATOM 16 N7 A B2490 54.076 140.716 101.659 1.00 40.21 N
ATOM 17 C5 A B2490 53.441 139.772 102.446 1.00 40.59 C
ATOM 18 C6 A B2490 53.916 138.873 103.411 1.00 40.18 C
ATOM 19 N6 A B2490 55.189 138.814 103.799 1.00 40.15 N
ATOM 20 N1 A B2490 53.023 138.042 103.990 1.00 39.89 N
ATOM 21 C2 A B2490 51.737 138.139 103.637 1.00 39.55 C
ATOM 22 N3 A B2490 51.164 138.964 102.767 1.00 41.65 N
ATOM 23 C4 A B2490 52.083 139.763 102.199 1.00 41.21 C
ATOM 24 P U B2491 47.064 143.383 99.057 1.00 39.31 P
ATOM 25 OP1 U B2491 47.674 144.227 98.011 1.00 41.23 O
ATOM 26 OP2 U B2491 46.252 144.002 100.109 1.00 37.85 O
ATOM 27 O5' U B2491 46.233 142.234 98.341 1.00 38.93 O
TER
ATOM 2 P U A2491 47.064 143.383 99.057 1.00 39.31 P
ATOM 3 OP1 U A2491 47.674 144.227 98.011 1.00 41.23 O
ATOM 4 OP2 U A2491 46.252 144.002 100.109 1.00 37.85 O
ATOM 5 O5' U A2491 46.233 142.234 98.341 1.00 38.93 O
ATOM 6 C5' U A2491 45.009 142.501 97.646 1.00 38.01 C
ATOM 7 C4' U A2491 44.244 141.213 97.464 1.00 36.77 C
ATOM 8 O4' U A2491 45.052 140.273 96.705 1.00 35.43 O
ATOM 9 C3' U A2491 43.945 140.499 98.768 1.00 34.59 C
ATOM 10 O3' U A2491 42.713 140.953 99.289 1.00 32.49 O
ATOM 11 C2' U A2491 43.859 139.048 98.341 1.00 34.76 C
ATOM 12 O2' U A2491 42.625 138.751 97.744 1.00 35.60 O
ATOM 13 C1' U A2491 44.946 138.980 97.275 1.00 34.97 C
ATOM 14 N1 U A2491 46.238 138.628 97.873 1.00 35.41 N
ATOM 15 C2 U A2491 46.356 137.406 98.490 1.00 36.19 C
ATOM 16 O2 U A2491 45.432 136.601 98.573 1.00 37.49 O
ATOM 17 N3 U A2491 47.596 137.148 99.012 1.00 36.65 N
ATOM 18 C4 U A2491 48.703 137.961 98.973 1.00 36.08 C
ATOM 19 O4 U A2491 49.777 137.548 99.411 1.00 35.93 O
ATOM 20 C5 U A2491 48.492 139.204 98.332 1.00 35.84 C
ATOM 21 C6 U A2491 47.297 139.489 97.820 1.00 35.96 C
ATOM 22 P C A2492 42.474 140.956 100.864 1.00 33.24 P
ATOM 23 OP1 C A2492 41.137 141.538 101.106 1.00 32.77 O
ATOM 24 OP2 C A2492 43.678 141.600 101.447 1.00 31.64 O
ATOM 25 O5' C A2492 42.406 139.411 101.247 1.00 30.76 O
TER
ATOM 1 O3' U B2489 53.322 146.041 98.014 1.00 33.68 O
ATOM 2 P A B2490 52.514 145.366 99.200 1.00 34.44 P
ATOM 3 OP1 A B2490 51.662 146.381 99.858 1.00 37.45 O
ATOM 4 OP2 A B2490 53.489 144.615 99.996 1.00 35.90 O
ATOM 5 O5' A B2490 51.557 144.386 98.399 1.00 36.38 O
ATOM 6 C5' A B2490 51.707 142.982 98.456 1.00 36.92 C
ATOM 7 C4' A B2490 50.379 142.350 98.747 1.00 38.47 C
ATOM 8 O4' A B2490 50.638 141.062 99.336 1.00 40.67 O
ATOM 9 C3' A B2490 49.552 143.070 99.801 1.00 40.39 C
ATOM 10 O3' A B2490 48.230 142.555 99.764 1.00 39.52 O
ATOM 11 C2' A B2490 50.214 142.612 101.089 1.00 41.71 C
ATOM 12 O2' A B2490 49.309 142.675 102.168 1.00 43.44 O
ATOM 13 C1' A B2490 50.568 141.160 100.747 1.00 41.23 C
ATOM 14 N9 A B2490 51.867 140.749 101.274 1.00 40.84 N
ATOM 15 C8 A B2490 53.104 141.262 100.981 1.00 40.23 C
ATOM 16 N7 A B2490 54.076 140.716 101.659 1.00 40.21 N
ATOM 17 C5 A B2490 53.441 139.772 102.446 1.00 40.59 C
ATOM 18 C6 A B2490 53.916 138.873 103.411 1.00 40.18 C
ATOM 19 N6 A B2490 55.189 138.814 103.799 1.00 40.15 N
ATOM 20 N1 A B2490 53.023 138.042 103.990 1.00 39.89 N
ATOM 21 C2 A B2490 51.737 138.139 103.637 1.00 39.55 C
ATOM 22 N3 A B2490 51.164 138.964 102.767 1.00 41.65 N
ATOM 23 C4 A B2490 52.083 139.763 102.199 1.00 41.21 C
ATOM 24 P U B2491 47.064 143.383 99.057 1.00 39.31 P
ATOM 25 OP1 U B2491 47.674 144.227 98.011 1.00 41.23 O
ATOM 26 OP2 U B2491 46.252 144.002 100.109 1.00 37.85 O
ATOM 27 O5' U B2491 46.233 142.234 98.341 1.00 38.93 O
TER
Atoms:
C4: (48.703,137.961,98.973)
N3: (47.596,137.148,99.012)
OP1: (47.674,144.227,98.011)
OP2: (46.252,144.002,100.109)
C2: (46.356,137.406,98.490)
C1': (44.946,138.980,97.275)
C3': (43.945,140.499,98.768)
O5': (46.233,142.234,98.341)
O4': (45.052,140.273,96.705)
C5': (45.009,142.501,97.646)
P: (47.064,143.383,99.057)
C4': (44.244,141.213,97.464)
C2': (43.859,139.048,98.341)
O2': (42.625,138.751,97.744)
N1: (46.238,138.628,97.873)
O4: (49.777,137.548,99.411)
O2: (45.432,136.601,98.573)
C6: (47.297,139.489,97.820)
C5: (48.492,139.204,98.332)
O3': (42.713,140.953,99.289)
N3: (47.596,137.148,99.012)
OP1: (47.674,144.227,98.011)
OP2: (46.252,144.002,100.109)
C2: (46.356,137.406,98.490)
C1': (44.946,138.980,97.275)
C3': (43.945,140.499,98.768)
O5': (46.233,142.234,98.341)
O4': (45.052,140.273,96.705)
C5': (45.009,142.501,97.646)
P: (47.064,143.383,99.057)
C4': (44.244,141.213,97.464)
C2': (43.859,139.048,98.341)
O2': (42.625,138.751,97.744)
N1: (46.238,138.628,97.873)
O4: (49.777,137.548,99.411)
O2: (45.432,136.601,98.573)
C6: (47.297,139.489,97.820)
C5: (48.492,139.204,98.332)
O3': (42.713,140.953,99.289)
OP1: (51.662,146.381,99.858)
OP2: (53.489,144.615,99.996)
C3': (49.552,143.070,99.801)
C1': (50.568,141.160,100.747)
C5': (51.707,142.982,98.456)
O4': (50.638,141.062,99.336)
C8: (53.104,141.262,100.981)
O2': (49.309,142.675,102.168)
C6: (53.916,138.873,103.411)
C5: (53.441,139.772,102.446)
C4: (52.083,139.763,102.199)
P: (52.514,145.366,99.200)
C4': (50.379,142.350,98.747)
C2': (50.214,142.612,101.089)
C2: (51.737,138.139,103.637)
N1: (53.023,138.042,103.990)
N3: (51.164,138.964,102.767)
N6: (55.189,138.814,103.799)
N7: (54.076,140.716,101.659)
N9: (51.867,140.749,101.274)
O5': (51.557,144.386,98.399)
O3': (48.230,142.555,99.764)
OP2: (53.489,144.615,99.996)
C3': (49.552,143.070,99.801)
C1': (50.568,141.160,100.747)
C5': (51.707,142.982,98.456)
O4': (50.638,141.062,99.336)
C8: (53.104,141.262,100.981)
O2': (49.309,142.675,102.168)
C6: (53.916,138.873,103.411)
C5: (53.441,139.772,102.446)
C4: (52.083,139.763,102.199)
P: (52.514,145.366,99.200)
C4': (50.379,142.350,98.747)
C2': (50.214,142.612,101.089)
C2: (51.737,138.139,103.637)
N1: (53.023,138.042,103.990)
N3: (51.164,138.964,102.767)
N6: (55.189,138.814,103.799)
N7: (54.076,140.716,101.659)
N9: (51.867,140.749,101.274)
O5': (51.557,144.386,98.399)
O3': (48.230,142.555,99.764)
Image (generated by PyMOL):