ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q81:A1247:A1245

Extra

PDB:
ATOM 1 O3' A A1246 16.214 85.202 91.181 1.00 48.99 O
ATOM 2 P U A1247 16.989 85.633 89.841 1.00 48.74 P
ATOM 3 OP1 U A1247 17.948 86.694 90.219 1.00 48.69 O
ATOM 4 OP2 U A1247 15.990 85.908 88.795 1.00 49.82 O
ATOM 5 O5' U A1247 17.787 84.325 89.400 1.00 48.01 O
ATOM 6 C5' U A1247 19.040 83.974 90.008 1.00 46.31 C
ATOM 7 C4' U A1247 19.496 82.616 89.521 1.00 45.83 C
ATOM 8 O4' U A1247 18.509 81.620 89.894 1.00 44.58 O
ATOM 9 C3' U A1247 19.620 82.453 88.014 1.00 47.38 C
ATOM 10 O3' U A1247 20.854 82.946 87.503 1.00 51.48 O
ATOM 11 C2' U A1247 19.496 80.947 87.854 1.00 46.16 C
ATOM 12 O2' U A1247 20.676 80.264 88.228 1.00 47.00 O
ATOM 13 C1' U A1247 18.405 80.644 88.876 1.00 43.45 C
ATOM 14 N1 U A1247 17.052 80.728 88.308 1.00 41.88 N
ATOM 15 C2 U A1247 16.609 79.671 87.529 1.00 41.19 C
ATOM 16 O2 U A1247 17.288 78.687 87.292 1.00 39.79 O
ATOM 17 N3 U A1247 15.333 79.807 87.043 1.00 41.39 N
ATOM 18 C4 U A1247 14.468 80.864 87.254 1.00 41.89 C
ATOM 19 O4 U A1247 13.324 80.815 86.784 1.00 41.15 O
ATOM 20 C5 U A1247 15.003 81.921 88.065 1.00 40.85 C
ATOM 21 C6 U A1247 16.242 81.821 88.549 1.00 40.14 C
ATOM 22 P C A1248 20.855 84.071 86.351 1.00 53.21 P
ATOM 23 OP1 C A1248 19.659 83.886 85.488 1.00 53.10 O
ATOM 24 OP2 C A1248 22.207 84.051 85.745 1.00 52.46 O
ATOM 25 O5' C A1248 20.676 85.437 87.155 1.00 54.19 O
TER

ATOM 1 O3' U B1244 8.546 82.839 84.442 1.00 56.10 O
ATOM 2 P A B1245 8.882 83.787 85.692 1.00 56.71 P
ATOM 3 OP1 A B1245 8.726 82.958 86.913 1.00 55.39 O
ATOM 4 OP2 A B1245 8.125 85.068 85.567 1.00 54.57 O
ATOM 5 O5' A B1245 10.424 84.109 85.486 1.00 56.18 O
ATOM 6 C5' A B1245 11.436 83.118 85.738 1.00 55.89 C
ATOM 7 C4' A B1245 12.792 83.781 85.759 1.00 56.44 C
ATOM 8 O4' A B1245 13.147 84.207 84.414 1.00 57.31 O
ATOM 9 C3' A B1245 12.867 85.072 86.562 1.00 56.42 C
ATOM 10 O3' A B1245 13.022 84.835 87.949 1.00 55.79 O
ATOM 11 C2' A B1245 14.090 85.738 85.959 1.00 55.69 C
ATOM 12 O2' A B1245 15.292 85.145 86.377 1.00 56.40 O
ATOM 13 C1' A B1245 13.915 85.396 84.483 1.00 56.39 C
ATOM 14 N9 A B1245 13.232 86.463 83.759 1.00 56.37 N
ATOM 15 C8 A B1245 11.907 86.817 83.789 1.00 56.16 C
ATOM 16 N7 A B1245 11.636 87.894 83.095 1.00 56.56 N
ATOM 17 C5 A B1245 12.861 88.263 82.558 1.00 56.15 C
ATOM 18 C6 A B1245 13.254 89.345 81.758 1.00 55.32 C
ATOM 19 N6 A B1245 12.428 90.312 81.366 1.00 53.98 N
ATOM 20 N1 A B1245 14.546 89.412 81.384 1.00 55.38 N
ATOM 21 C2 A B1245 15.386 88.461 81.810 1.00 56.59 C
ATOM 22 N3 A B1245 15.144 87.411 82.581 1.00 56.65 N
ATOM 23 C4 A B1245 13.846 87.370 82.930 1.00 56.78 C
ATOM 24 P A B1246 11.753 84.966 88.905 1.00 56.04 P
ATOM 25 OP1 A B1246 10.821 83.933 88.449 1.00 58.59 O
ATOM 26 OP2 A B1246 11.298 86.369 88.968 1.00 53.64 O
ATOM 27 O5' A B1246 12.280 84.479 90.320 1.00 54.98 O
TER

Atoms:
C4: (14.468,80.864,87.254)
N3: (15.333,79.807,87.043)
OP1: (17.948,86.694,90.219)
OP2: (15.990,85.908,88.795)
C2: (16.609,79.671,87.529)
C1': (18.405,80.644,88.876)
C3': (19.620,82.453,88.014)
O5': (17.787,84.325,89.400)
O4': (18.509,81.620,89.894)
C5': (19.040,83.974,90.008)
P: (16.989,85.633,89.841)
C4': (19.496,82.616,89.521)
C2': (19.496,80.947,87.854)
O2': (20.676,80.264,88.228)
N1: (17.052,80.728,88.308)
O4: (13.324,80.815,86.784)
O2: (17.288,78.687,87.292)
C6: (16.242,81.821,88.549)
C5: (15.003,81.921,88.065)
O3': (20.854,82.946,87.503)
OP1: (8.726,82.958,86.913)
OP2: (8.125,85.068,85.567)
C3': (12.867,85.072,86.562)
C1': (13.915,85.396,84.483)
C5': (11.436,83.118,85.738)
O4': (13.147,84.207,84.414)
C8: (11.907,86.817,83.789)
O2': (15.292,85.145,86.377)
C6: (13.254,89.345,81.758)
C5: (12.861,88.263,82.558)
C4: (13.846,87.370,82.930)
P: (8.882,83.787,85.692)
C4': (12.792,83.781,85.759)
C2': (14.090,85.738,85.959)
C2: (15.386,88.461,81.810)
N1: (14.546,89.412,81.384)
N3: (15.144,87.411,82.581)
N6: (12.428,90.312,81.366)
N7: (11.636,87.894,83.095)
N9: (13.232,86.463,83.759)
O5': (10.424,84.109,85.486)
O3': (13.022,84.835,87.949)
Image (generated by PyMOL):
PyMOL image
show in jmol