ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1U0B:A19:A20

Extra

PDB:
ATOM 1 O3' U A 18 72.986 58.618 -7.681 1.00 87.36 O
ATOM 2 P U A 19 72.588 57.287 -8.510 1.00 87.72 P
ATOM 3 OP1 U A 19 73.807 56.398 -8.600 1.00 85.30 O
ATOM 4 OP2 U A 19 71.900 57.724 -9.755 1.00 87.67 O
ATOM 5 O5' U A 19 71.534 56.531 -7.584 1.00 81.06 O
ATOM 6 C5' U A 19 70.151 56.840 -7.672 1.00 76.95 C
ATOM 7 C4' U A 19 69.461 55.897 -8.624 1.00 74.99 C
ATOM 8 O4' U A 19 70.127 55.979 -9.906 1.00 75.38 O
ATOM 9 C3' U A 19 69.545 54.414 -8.288 1.00 72.38 C
ATOM 10 O3' U A 19 68.525 54.035 -7.360 1.00 64.73 O
ATOM 11 C2' U A 19 69.252 53.799 -9.653 1.00 74.52 C
ATOM 12 O2' U A 19 67.867 53.866 -9.977 1.00 74.99 O
ATOM 13 C1' U A 19 70.041 54.731 -10.575 1.00 77.35 C
ATOM 14 N1 U A 19 71.404 54.225 -10.798 1.00 80.83 N
ATOM 15 C2 U A 19 72.298 55.035 -11.489 1.00 81.79 C
ATOM 16 O2 U A 19 72.004 56.158 -11.898 1.00 81.27 O
ATOM 17 N3 U A 19 73.548 54.483 -11.681 1.00 80.91 N
ATOM 18 C4 U A 19 73.983 53.232 -11.270 1.00 81.67 C
ATOM 19 O4 U A 19 75.158 52.890 -11.486 1.00 81.84 O
ATOM 20 C5 U A 19 72.996 52.456 -10.573 1.00 80.48 C
ATOM 21 C6 U A 19 71.779 52.964 -10.359 1.00 80.85 C
ATOM 22 P A A 20 68.885 53.108 -6.100 1.00 60.08 P
ATOM 23 OP1 A A 20 67.579 52.578 -5.612 1.00 63.26 O
ATOM 24 OP2 A A 20 69.756 53.882 -5.175 1.00 61.15 O
ATOM 25 O5' A A 20 69.736 51.894 -6.707 1.00 58.69 O
TER

ATOM 1 O3' U B 19 68.525 54.035 -7.360 1.00 64.73 O
ATOM 2 P A B 20 68.885 53.108 -6.100 1.00 60.08 P
ATOM 3 OP1 A B 20 67.579 52.578 -5.612 1.00 63.26 O
ATOM 4 OP2 A B 20 69.756 53.882 -5.175 1.00 61.15 O
ATOM 5 O5' A B 20 69.736 51.894 -6.707 1.00 58.69 O
ATOM 6 C5' A B 20 69.177 50.986 -7.679 1.00 47.57 C
ATOM 7 C4' A B 20 70.278 50.161 -8.319 1.00 42.11 C
ATOM 8 O4' A B 20 70.876 49.305 -7.302 1.00 41.79 O
ATOM 9 C3' A B 20 69.842 49.178 -9.401 1.00 39.79 C
ATOM 10 O3' A B 20 69.717 49.780 -10.688 1.00 34.89 O
ATOM 11 C2' A B 20 70.976 48.163 -9.383 1.00 38.57 C
ATOM 12 O2' A B 20 72.135 48.636 -10.048 1.00 33.85 O
ATOM 13 C1' A B 20 71.254 48.063 -7.882 1.00 39.35 C
ATOM 14 N9 A B 20 70.510 46.982 -7.225 1.00 42.73 N
ATOM 15 C8 A B 20 69.503 47.066 -6.292 1.00 41.43 C
ATOM 16 N7 A B 20 69.079 45.902 -5.866 1.00 43.53 N
ATOM 17 C5 A B 20 69.850 44.989 -6.572 1.00 41.36 C
ATOM 18 C6 A B 20 69.903 43.585 -6.566 1.00 41.40 C
ATOM 19 N6 A B 20 69.142 42.807 -5.791 1.00 36.64 N
ATOM 20 N1 A B 20 70.784 42.992 -7.394 1.00 44.17 N
ATOM 21 C2 A B 20 71.556 43.760 -8.167 1.00 39.41 C
ATOM 22 N3 A B 20 71.603 45.077 -8.262 1.00 39.01 N
ATOM 23 C4 A B 20 70.719 45.641 -7.426 1.00 40.53 C
ATOM 24 P U B 21 68.345 49.613 -11.493 1.00 36.09 P
ATOM 25 OP1 U B 21 68.480 50.236 -12.841 1.00 38.48 O
ATOM 26 OP2 U B 21 67.264 50.062 -10.577 1.00 38.27 O
ATOM 27 O5' U B 21 68.170 48.041 -11.667 1.00 35.45 O
TER

Atoms:
C4: (73.983,53.232,-11.270)
N3: (73.548,54.483,-11.681)
OP1: (73.807,56.398,-8.600)
OP2: (71.900,57.724,-9.755)
C2: (72.298,55.035,-11.489)
C1': (70.041,54.731,-10.575)
C3': (69.545,54.414,-8.288)
O5': (71.534,56.531,-7.584)
O4': (70.127,55.979,-9.906)
C5': (70.151,56.840,-7.672)
P: (72.588,57.287,-8.510)
C4': (69.461,55.897,-8.624)
C2': (69.252,53.799,-9.653)
O2': (67.867,53.866,-9.977)
N1: (71.404,54.225,-10.798)
O4: (75.158,52.890,-11.486)
O2: (72.004,56.158,-11.898)
C6: (71.779,52.964,-10.359)
C5: (72.996,52.456,-10.573)
O3': (68.525,54.035,-7.360)
OP1: (67.579,52.578,-5.612)
OP2: (69.756,53.882,-5.175)
C3': (69.842,49.178,-9.401)
C1': (71.254,48.063,-7.882)
C5': (69.177,50.986,-7.679)
O4': (70.876,49.305,-7.302)
C8: (69.503,47.066,-6.292)
O2': (72.135,48.636,-10.048)
C6: (69.903,43.585,-6.566)
C5: (69.850,44.989,-6.572)
C4: (70.719,45.641,-7.426)
P: (68.885,53.108,-6.100)
C4': (70.278,50.161,-8.319)
C2': (70.976,48.163,-9.383)
C2: (71.556,43.760,-8.167)
N1: (70.784,42.992,-7.394)
N3: (71.603,45.077,-8.262)
N6: (69.142,42.807,-5.791)
N7: (69.079,45.902,-5.866)
N9: (70.510,46.982,-7.225)
O5': (69.736,51.894,-6.707)
O3': (69.717,49.780,-10.688)
Image (generated by PyMOL):
PyMOL image
show in jmol