ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:01247:01245

Extra

PDB:
ATOM 1 O3' A A1246 15.780 84.818 90.900 1.00 46.38 O
ATOM 2 P U A1247 16.567 85.248 89.567 1.00 44.36 P
ATOM 3 OP1 U A1247 17.593 86.241 89.988 1.00 45.60 O
ATOM 4 OP2 U A1247 15.577 85.618 88.528 1.00 43.35 O
ATOM 5 O5' U A1247 17.288 83.906 89.094 1.00 43.82 O
ATOM 6 C5' U A1247 18.500 83.458 89.716 1.00 42.58 C
ATOM 7 C4' U A1247 18.893 82.091 89.191 1.00 43.45 C
ATOM 8 O4' U A1247 17.815 81.146 89.429 1.00 41.50 O
ATOM 9 C3' U A1247 19.129 81.973 87.695 1.00 44.47 C
ATOM 10 O3' U A1247 20.420 82.439 87.317 1.00 47.58 O
ATOM 11 C2' U A1247 18.970 80.473 87.473 1.00 43.25 C
ATOM 12 O2' U A1247 20.079 79.703 87.900 1.00 44.37 O
ATOM 13 C1' U A1247 17.798 80.167 88.400 1.00 40.52 C
ATOM 14 N1 U A1247 16.513 80.251 87.695 1.00 39.05 N
ATOM 15 C2 U A1247 16.164 79.208 86.852 1.00 39.44 C
ATOM 16 O2 U A1247 16.882 78.240 86.652 1.00 39.32 O
ATOM 17 N3 U A1247 14.943 79.343 86.246 1.00 39.57 N
ATOM 18 C4 U A1247 14.062 80.393 86.381 1.00 40.32 C
ATOM 19 O4 U A1247 12.997 80.369 85.767 1.00 43.46 O
ATOM 20 C5 U A1247 14.500 81.435 87.253 1.00 40.40 C
ATOM 21 C6 U A1247 15.679 81.331 87.866 1.00 40.29 C
ATOM 22 P C A1248 20.559 83.543 86.153 1.00 47.82 P
ATOM 23 OP1 C A1248 19.580 83.238 85.064 1.00 45.33 O
ATOM 24 OP2 C A1248 22.014 83.637 85.836 1.00 47.65 O
ATOM 25 O5' C A1248 20.142 84.901 86.873 1.00 46.46 O
TER

ATOM 1 O3' U B1244 7.814 82.586 83.712 1.00 44.41 O
ATOM 2 P A B1245 8.223 83.483 84.969 1.00 45.49 P
ATOM 3 OP1 A B1245 8.141 82.672 86.231 1.00 45.02 O
ATOM 4 OP2 A B1245 7.472 84.768 84.871 1.00 42.13 O
ATOM 5 O5' A B1245 9.758 83.793 84.679 1.00 47.37 O
ATOM 6 C5' A B1245 10.783 82.811 84.927 1.00 46.75 C
ATOM 7 C4' A B1245 12.149 83.466 84.887 1.00 48.43 C
ATOM 8 O4' A B1245 12.425 83.958 83.545 1.00 48.76 O
ATOM 9 C3' A B1245 12.325 84.704 85.759 1.00 48.07 C
ATOM 10 O3' A B1245 12.618 84.365 87.100 1.00 48.09 O
ATOM 11 C2' A B1245 13.527 85.370 85.111 1.00 48.29 C
ATOM 12 O2' A B1245 14.738 84.736 85.479 1.00 48.28 O
ATOM 13 C1' A B1245 13.236 85.120 83.628 1.00 47.58 C
ATOM 14 N9 A B1245 12.524 86.239 83.006 1.00 46.80 N
ATOM 15 C8 A B1245 11.192 86.565 83.079 1.00 45.74 C
ATOM 16 N7 A B1245 10.880 87.663 82.430 1.00 45.97 N
ATOM 17 C5 A B1245 12.087 88.080 81.883 1.00 45.08 C
ATOM 18 C6 A B1245 12.437 89.185 81.087 1.00 44.42 C
ATOM 19 N6 A B1245 11.569 90.113 80.670 1.00 42.85 N
ATOM 20 N1 A B1245 13.729 89.308 80.726 1.00 43.47 N
ATOM 21 C2 A B1245 14.601 88.384 81.134 1.00 43.44 C
ATOM 22 N3 A B1245 14.397 87.305 81.874 1.00 43.82 N
ATOM 23 C4 A B1245 13.104 87.210 82.224 1.00 45.54 C
ATOM 24 P A B1246 11.593 84.764 88.265 1.00 48.70 P
ATOM 25 OP1 A B1246 10.328 84.000 88.025 1.00 51.04 O
ATOM 26 OP2 A B1246 11.540 86.242 88.401 1.00 48.68 O
ATOM 27 O5' A B1246 12.285 84.141 89.554 1.00 46.09 O
TER

Atoms:
C4: (14.062,80.393,86.381)
N3: (14.943,79.343,86.246)
OP1: (17.593,86.241,89.988)
OP2: (15.577,85.618,88.528)
C2: (16.164,79.208,86.852)
C1': (17.798,80.167,88.400)
C3': (19.129,81.973,87.695)
O5': (17.288,83.906,89.094)
O4': (17.815,81.146,89.429)
C5': (18.500,83.458,89.716)
P: (16.567,85.248,89.567)
C4': (18.893,82.091,89.191)
C2': (18.970,80.473,87.473)
O2': (20.079,79.703,87.900)
N1: (16.513,80.251,87.695)
O4: (12.997,80.369,85.767)
O2: (16.882,78.240,86.652)
C6: (15.679,81.331,87.866)
C5: (14.500,81.435,87.253)
O3': (20.420,82.439,87.317)
OP1: (8.141,82.672,86.231)
OP2: (7.472,84.768,84.871)
C3': (12.325,84.704,85.759)
C1': (13.236,85.120,83.628)
C5': (10.783,82.811,84.927)
O4': (12.425,83.958,83.545)
C8: (11.192,86.565,83.079)
O2': (14.738,84.736,85.479)
C6: (12.437,89.185,81.087)
C5: (12.087,88.080,81.883)
C4: (13.104,87.210,82.224)
P: (8.223,83.483,84.969)
C4': (12.149,83.466,84.887)
C2': (13.527,85.370,85.111)
C2: (14.601,88.384,81.134)
N1: (13.729,89.308,80.726)
N3: (14.397,87.305,81.874)
N6: (11.569,90.113,80.670)
N7: (10.880,87.663,82.430)
N9: (12.524,86.239,83.006)
O5': (9.758,83.793,84.679)
O3': (12.618,84.365,87.100)
Image (generated by PyMOL):
PyMOL image
show in jmol