ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01247:01245

Extra

PDB:
ATOM 1 O3' A A1246 15.835 84.470 90.911 1.00 59.42 O
ATOM 2 P U A1247 16.506 85.005 89.554 1.00 55.86 P
ATOM 3 OP1 U A1247 17.468 86.057 89.954 1.00 58.37 O
ATOM 4 OP2 U A1247 15.431 85.323 88.588 1.00 55.06 O
ATOM 5 O5' U A1247 17.321 83.754 89.003 1.00 55.28 O
ATOM 6 C5' U A1247 18.484 83.271 89.693 1.00 54.06 C
ATOM 7 C4' U A1247 18.867 81.900 89.183 1.00 54.82 C
ATOM 8 O4' U A1247 17.822 80.941 89.496 1.00 54.28 O
ATOM 9 C3' U A1247 19.033 81.772 87.681 1.00 54.86 C
ATOM 10 O3' U A1247 20.312 82.234 87.260 1.00 58.08 O
ATOM 11 C2' U A1247 18.869 80.272 87.478 1.00 54.11 C
ATOM 12 O2' U A1247 20.019 79.537 87.848 1.00 55.67 O
ATOM 13 C1' U A1247 17.754 79.957 88.475 1.00 52.27 C
ATOM 14 N1 U A1247 16.418 80.004 87.861 1.00 50.91 N
ATOM 15 C2 U A1247 16.047 78.949 87.034 1.00 51.09 C
ATOM 16 O2 U A1247 16.768 77.990 86.812 1.00 50.38 O
ATOM 17 N3 U A1247 14.798 79.062 86.475 1.00 48.72 N
ATOM 18 C4 U A1247 13.904 80.094 86.650 1.00 50.90 C
ATOM 19 O4 U A1247 12.821 80.055 86.069 1.00 54.62 O
ATOM 20 C5 U A1247 14.350 81.138 87.521 1.00 50.53 C
ATOM 21 C6 U A1247 15.559 81.060 88.084 1.00 50.77 C
ATOM 22 P C A1248 20.426 83.272 86.038 1.00 57.58 P
ATOM 23 OP1 C A1248 19.384 82.955 85.022 1.00 56.28 O
ATOM 24 OP2 C A1248 21.856 83.289 85.640 1.00 58.64 O
ATOM 25 O5' C A1248 20.096 84.681 86.704 1.00 57.37 O
TER

ATOM 1 O3' U B1244 7.901 82.312 83.747 1.00 57.00 O
ATOM 2 P A B1245 8.267 83.207 85.021 1.00 57.72 P
ATOM 3 OP1 A B1245 8.153 82.363 86.246 1.00 57.86 O
ATOM 4 OP2 A B1245 7.480 84.466 84.923 1.00 54.62 O
ATOM 5 O5' A B1245 9.806 83.553 84.792 1.00 58.37 O
ATOM 6 C5' A B1245 10.838 82.577 85.032 1.00 57.26 C
ATOM 7 C4' A B1245 12.205 83.232 84.983 1.00 58.95 C
ATOM 8 O4' A B1245 12.488 83.694 83.633 1.00 59.30 O
ATOM 9 C3' A B1245 12.391 84.482 85.834 1.00 58.40 C
ATOM 10 O3' A B1245 12.672 84.167 87.188 1.00 59.40 O
ATOM 11 C2' A B1245 13.597 85.130 85.168 1.00 57.93 C
ATOM 12 O2' A B1245 14.821 84.510 85.520 1.00 57.90 O
ATOM 13 C1' A B1245 13.304 84.855 83.692 1.00 56.83 C
ATOM 14 N9 A B1245 12.592 85.968 83.060 1.00 55.06 N
ATOM 15 C8 A B1245 11.256 86.279 83.131 1.00 53.49 C
ATOM 16 N7 A B1245 10.933 87.373 82.484 1.00 53.27 N
ATOM 17 C5 A B1245 12.136 87.806 81.941 1.00 51.69 C
ATOM 18 C6 A B1245 12.474 88.922 81.149 1.00 49.64 C
ATOM 19 N6 A B1245 11.596 89.844 80.749 1.00 44.77 N
ATOM 20 N1 A B1245 13.764 89.059 80.781 1.00 48.37 N
ATOM 21 C2 A B1245 14.647 88.138 81.184 1.00 50.76 C
ATOM 22 N3 A B1245 14.454 87.052 81.927 1.00 50.94 N
ATOM 23 C4 A B1245 13.163 86.943 82.279 1.00 52.42 C
ATOM 24 P A B1246 11.544 84.369 88.311 1.00 59.63 P
ATOM 25 OP1 A B1246 10.432 83.450 87.956 1.00 60.84 O
ATOM 26 OP2 A B1246 11.257 85.811 88.514 1.00 59.34 O
ATOM 27 O5' A B1246 12.257 83.792 89.612 1.00 58.88 O
TER

Atoms:
C4: (13.904,80.094,86.650)
N3: (14.798,79.062,86.475)
OP1: (17.468,86.057,89.954)
OP2: (15.431,85.323,88.588)
C2: (16.047,78.949,87.034)
C1': (17.754,79.957,88.475)
C3': (19.033,81.772,87.681)
O5': (17.321,83.754,89.003)
O4': (17.822,80.941,89.496)
C5': (18.484,83.271,89.693)
P: (16.506,85.005,89.554)
C4': (18.867,81.900,89.183)
C2': (18.869,80.272,87.478)
O2': (20.019,79.537,87.848)
N1: (16.418,80.004,87.861)
O4: (12.821,80.055,86.069)
O2: (16.768,77.990,86.812)
C6: (15.559,81.060,88.084)
C5: (14.350,81.138,87.521)
O3': (20.312,82.234,87.260)
OP1: (8.153,82.363,86.246)
OP2: (7.480,84.466,84.923)
C3': (12.391,84.482,85.834)
C1': (13.304,84.855,83.692)
C5': (10.838,82.577,85.032)
O4': (12.488,83.694,83.633)
C8: (11.256,86.279,83.131)
O2': (14.821,84.510,85.520)
C6: (12.474,88.922,81.149)
C5: (12.136,87.806,81.941)
C4: (13.163,86.943,82.279)
P: (8.267,83.207,85.021)
C4': (12.205,83.232,84.983)
C2': (13.597,85.130,85.168)
C2: (14.647,88.138,81.184)
N1: (13.764,89.059,80.781)
N3: (14.454,87.052,81.927)
N6: (11.596,89.844,80.749)
N7: (10.933,87.373,82.484)
N9: (12.592,85.968,83.060)
O5': (9.806,83.553,84.792)
O3': (12.672,84.167,87.188)
Image (generated by PyMOL):
PyMOL image
show in jmol