Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01247:01245
Extra
PDB:
ATOM 1 O3' A A1246 16.226 85.724 91.045 1.00 39.55 O
ATOM 2 P U A1247 16.989 86.118 89.686 1.00 37.22 P
ATOM 3 OP1 U A1247 17.998 87.126 90.073 1.00 38.53 O
ATOM 4 OP2 U A1247 15.986 86.459 88.649 1.00 36.24 O
ATOM 5 O5' U A1247 17.721 84.772 89.244 1.00 36.77 O
ATOM 6 C5' U A1247 18.993 84.397 89.804 1.00 37.44 C
ATOM 7 C4' U A1247 19.424 83.050 89.271 1.00 39.08 C
ATOM 8 O4' U A1247 18.419 82.059 89.615 1.00 39.71 O
ATOM 9 C3' U A1247 19.542 82.916 87.760 1.00 39.92 C
ATOM 10 O3' U A1247 20.777 83.424 87.262 1.00 44.51 O
ATOM 11 C2' U A1247 19.439 81.408 87.578 1.00 38.40 C
ATOM 12 O2' U A1247 20.620 80.715 87.920 1.00 37.72 O
ATOM 13 C1' U A1247 18.365 81.060 88.606 1.00 37.85 C
ATOM 14 N1 U A1247 17.018 81.051 88.013 1.00 37.39 N
ATOM 15 C2 U A1247 16.670 79.967 87.218 1.00 36.16 C
ATOM 16 O2 U A1247 17.415 79.022 87.019 1.00 36.14 O
ATOM 17 N3 U A1247 15.417 80.030 86.667 1.00 34.86 N
ATOM 18 C4 U A1247 14.493 81.036 86.824 1.00 36.95 C
ATOM 19 O4 U A1247 13.440 80.988 86.191 1.00 39.67 O
ATOM 20 C5 U A1247 14.914 82.112 87.670 1.00 36.98 C
ATOM 21 C6 U A1247 16.131 82.084 88.221 1.00 37.17 C
ATOM 22 P C A1248 20.787 84.451 86.017 1.00 46.37 P
ATOM 23 OP1 C A1248 19.777 84.049 85.011 1.00 45.83 O
ATOM 24 OP2 C A1248 22.207 84.572 85.604 1.00 49.71 O
ATOM 25 O5' C A1248 20.378 85.843 86.675 1.00 46.07 O
TER
ATOM 1 O3' U B1244 8.480 83.237 84.148 1.00 42.42 O
ATOM 2 P A B1245 8.897 84.153 85.397 1.00 42.98 P
ATOM 3 OP1 A B1245 8.826 83.328 86.628 1.00 41.25 O
ATOM 4 OP2 A B1245 8.138 85.424 85.320 1.00 40.25 O
ATOM 5 O5' A B1245 10.427 84.489 85.115 1.00 44.36 O
ATOM 6 C5' A B1245 11.459 83.507 85.318 1.00 43.46 C
ATOM 7 C4' A B1245 12.816 84.174 85.304 1.00 44.73 C
ATOM 8 O4' A B1245 13.125 84.661 83.969 1.00 46.04 O
ATOM 9 C3' A B1245 12.947 85.420 86.162 1.00 43.96 C
ATOM 10 O3' A B1245 13.128 85.103 87.529 1.00 43.25 O
ATOM 11 C2' A B1245 14.169 86.090 85.552 1.00 44.95 C
ATOM 12 O2' A B1245 15.390 85.479 85.929 1.00 45.26 O
ATOM 13 C1' A B1245 13.932 85.823 84.066 1.00 45.26 C
ATOM 14 N9 A B1245 13.244 86.932 83.408 1.00 47.27 N
ATOM 15 C8 A B1245 11.926 87.302 83.508 1.00 47.84 C
ATOM 16 N7 A B1245 11.620 88.366 82.807 1.00 49.13 N
ATOM 17 C5 A B1245 12.819 88.719 82.198 1.00 48.05 C
ATOM 18 C6 A B1245 13.168 89.767 81.327 1.00 46.88 C
ATOM 19 N6 A B1245 12.307 90.688 80.887 1.00 44.10 N
ATOM 20 N1 A B1245 14.450 89.835 80.914 1.00 47.26 N
ATOM 21 C2 A B1245 15.314 88.909 81.344 1.00 47.28 C
ATOM 22 N3 A B1245 15.109 87.879 82.154 1.00 48.13 N
ATOM 23 C4 A B1245 13.825 87.841 82.555 1.00 48.52 C
ATOM 24 P A B1246 11.979 85.472 88.580 1.00 42.08 P
ATOM 25 OP1 A B1246 10.818 84.621 88.221 1.00 44.89 O
ATOM 26 OP2 A B1246 11.813 86.944 88.658 1.00 38.72 O
ATOM 27 O5' A B1246 12.550 84.921 89.957 1.00 41.65 O
TER
ATOM 2 P U A1247 16.989 86.118 89.686 1.00 37.22 P
ATOM 3 OP1 U A1247 17.998 87.126 90.073 1.00 38.53 O
ATOM 4 OP2 U A1247 15.986 86.459 88.649 1.00 36.24 O
ATOM 5 O5' U A1247 17.721 84.772 89.244 1.00 36.77 O
ATOM 6 C5' U A1247 18.993 84.397 89.804 1.00 37.44 C
ATOM 7 C4' U A1247 19.424 83.050 89.271 1.00 39.08 C
ATOM 8 O4' U A1247 18.419 82.059 89.615 1.00 39.71 O
ATOM 9 C3' U A1247 19.542 82.916 87.760 1.00 39.92 C
ATOM 10 O3' U A1247 20.777 83.424 87.262 1.00 44.51 O
ATOM 11 C2' U A1247 19.439 81.408 87.578 1.00 38.40 C
ATOM 12 O2' U A1247 20.620 80.715 87.920 1.00 37.72 O
ATOM 13 C1' U A1247 18.365 81.060 88.606 1.00 37.85 C
ATOM 14 N1 U A1247 17.018 81.051 88.013 1.00 37.39 N
ATOM 15 C2 U A1247 16.670 79.967 87.218 1.00 36.16 C
ATOM 16 O2 U A1247 17.415 79.022 87.019 1.00 36.14 O
ATOM 17 N3 U A1247 15.417 80.030 86.667 1.00 34.86 N
ATOM 18 C4 U A1247 14.493 81.036 86.824 1.00 36.95 C
ATOM 19 O4 U A1247 13.440 80.988 86.191 1.00 39.67 O
ATOM 20 C5 U A1247 14.914 82.112 87.670 1.00 36.98 C
ATOM 21 C6 U A1247 16.131 82.084 88.221 1.00 37.17 C
ATOM 22 P C A1248 20.787 84.451 86.017 1.00 46.37 P
ATOM 23 OP1 C A1248 19.777 84.049 85.011 1.00 45.83 O
ATOM 24 OP2 C A1248 22.207 84.572 85.604 1.00 49.71 O
ATOM 25 O5' C A1248 20.378 85.843 86.675 1.00 46.07 O
TER
ATOM 1 O3' U B1244 8.480 83.237 84.148 1.00 42.42 O
ATOM 2 P A B1245 8.897 84.153 85.397 1.00 42.98 P
ATOM 3 OP1 A B1245 8.826 83.328 86.628 1.00 41.25 O
ATOM 4 OP2 A B1245 8.138 85.424 85.320 1.00 40.25 O
ATOM 5 O5' A B1245 10.427 84.489 85.115 1.00 44.36 O
ATOM 6 C5' A B1245 11.459 83.507 85.318 1.00 43.46 C
ATOM 7 C4' A B1245 12.816 84.174 85.304 1.00 44.73 C
ATOM 8 O4' A B1245 13.125 84.661 83.969 1.00 46.04 O
ATOM 9 C3' A B1245 12.947 85.420 86.162 1.00 43.96 C
ATOM 10 O3' A B1245 13.128 85.103 87.529 1.00 43.25 O
ATOM 11 C2' A B1245 14.169 86.090 85.552 1.00 44.95 C
ATOM 12 O2' A B1245 15.390 85.479 85.929 1.00 45.26 O
ATOM 13 C1' A B1245 13.932 85.823 84.066 1.00 45.26 C
ATOM 14 N9 A B1245 13.244 86.932 83.408 1.00 47.27 N
ATOM 15 C8 A B1245 11.926 87.302 83.508 1.00 47.84 C
ATOM 16 N7 A B1245 11.620 88.366 82.807 1.00 49.13 N
ATOM 17 C5 A B1245 12.819 88.719 82.198 1.00 48.05 C
ATOM 18 C6 A B1245 13.168 89.767 81.327 1.00 46.88 C
ATOM 19 N6 A B1245 12.307 90.688 80.887 1.00 44.10 N
ATOM 20 N1 A B1245 14.450 89.835 80.914 1.00 47.26 N
ATOM 21 C2 A B1245 15.314 88.909 81.344 1.00 47.28 C
ATOM 22 N3 A B1245 15.109 87.879 82.154 1.00 48.13 N
ATOM 23 C4 A B1245 13.825 87.841 82.555 1.00 48.52 C
ATOM 24 P A B1246 11.979 85.472 88.580 1.00 42.08 P
ATOM 25 OP1 A B1246 10.818 84.621 88.221 1.00 44.89 O
ATOM 26 OP2 A B1246 11.813 86.944 88.658 1.00 38.72 O
ATOM 27 O5' A B1246 12.550 84.921 89.957 1.00 41.65 O
TER
Atoms:
C4: (14.493,81.036,86.824)
N3: (15.417,80.030,86.667)
OP1: (17.998,87.126,90.073)
OP2: (15.986,86.459,88.649)
C2: (16.670,79.967,87.218)
C1': (18.365,81.060,88.606)
C3': (19.542,82.916,87.760)
O5': (17.721,84.772,89.244)
O4': (18.419,82.059,89.615)
C5': (18.993,84.397,89.804)
P: (16.989,86.118,89.686)
C4': (19.424,83.050,89.271)
C2': (19.439,81.408,87.578)
O2': (20.620,80.715,87.920)
N1: (17.018,81.051,88.013)
O4: (13.440,80.988,86.191)
O2: (17.415,79.022,87.019)
C6: (16.131,82.084,88.221)
C5: (14.914,82.112,87.670)
O3': (20.777,83.424,87.262)
N3: (15.417,80.030,86.667)
OP1: (17.998,87.126,90.073)
OP2: (15.986,86.459,88.649)
C2: (16.670,79.967,87.218)
C1': (18.365,81.060,88.606)
C3': (19.542,82.916,87.760)
O5': (17.721,84.772,89.244)
O4': (18.419,82.059,89.615)
C5': (18.993,84.397,89.804)
P: (16.989,86.118,89.686)
C4': (19.424,83.050,89.271)
C2': (19.439,81.408,87.578)
O2': (20.620,80.715,87.920)
N1: (17.018,81.051,88.013)
O4: (13.440,80.988,86.191)
O2: (17.415,79.022,87.019)
C6: (16.131,82.084,88.221)
C5: (14.914,82.112,87.670)
O3': (20.777,83.424,87.262)
OP1: (8.826,83.328,86.628)
OP2: (8.138,85.424,85.320)
C3': (12.947,85.420,86.162)
C1': (13.932,85.823,84.066)
C5': (11.459,83.507,85.318)
O4': (13.125,84.661,83.969)
C8: (11.926,87.302,83.508)
O2': (15.390,85.479,85.929)
C6: (13.168,89.767,81.327)
C5: (12.819,88.719,82.198)
C4: (13.825,87.841,82.555)
P: (8.897,84.153,85.397)
C4': (12.816,84.174,85.304)
C2': (14.169,86.090,85.552)
C2: (15.314,88.909,81.344)
N1: (14.450,89.835,80.914)
N3: (15.109,87.879,82.154)
N6: (12.307,90.688,80.887)
N7: (11.620,88.366,82.807)
N9: (13.244,86.932,83.408)
O5': (10.427,84.489,85.115)
O3': (13.128,85.103,87.529)
OP2: (8.138,85.424,85.320)
C3': (12.947,85.420,86.162)
C1': (13.932,85.823,84.066)
C5': (11.459,83.507,85.318)
O4': (13.125,84.661,83.969)
C8: (11.926,87.302,83.508)
O2': (15.390,85.479,85.929)
C6: (13.168,89.767,81.327)
C5: (12.819,88.719,82.198)
C4: (13.825,87.841,82.555)
P: (8.897,84.153,85.397)
C4': (12.816,84.174,85.304)
C2': (14.169,86.090,85.552)
C2: (15.314,88.909,81.344)
N1: (14.450,89.835,80.914)
N3: (15.109,87.879,82.154)
N6: (12.307,90.688,80.887)
N7: (11.620,88.366,82.807)
N9: (13.244,86.932,83.408)
O5': (10.427,84.489,85.115)
O3': (13.128,85.103,87.529)
Image (generated by PyMOL):