Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02491:02490
Extra
PDB:
ATOM 1 O3' A A2490 48.070 142.510 99.319 1.00 37.76 O
ATOM 2 P U A2491 46.854 143.428 98.801 1.00 36.89 P
ATOM 3 OP1 U A2491 47.246 144.137 97.560 1.00 39.16 O
ATOM 4 OP2 U A2491 46.365 144.195 99.954 1.00 37.33 O
ATOM 5 O5' U A2491 45.744 142.339 98.462 1.00 36.62 O
ATOM 6 C5' U A2491 44.834 142.477 97.356 1.00 36.05 C
ATOM 7 C4' U A2491 44.090 141.175 97.146 1.00 35.46 C
ATOM 8 O4' U A2491 44.907 140.222 96.411 1.00 35.10 O
ATOM 9 C3' U A2491 43.733 140.468 98.442 1.00 33.13 C
ATOM 10 O3' U A2491 42.524 140.971 98.971 1.00 34.33 O
ATOM 11 C2' U A2491 43.654 139.011 98.022 1.00 32.83 C
ATOM 12 O2' U A2491 42.442 138.698 97.386 1.00 32.14 O
ATOM 13 C1' U A2491 44.790 138.932 96.999 1.00 33.40 C
ATOM 14 N1 U A2491 46.098 138.580 97.583 1.00 35.11 N
ATOM 15 C2 U A2491 46.214 137.393 98.294 1.00 33.76 C
ATOM 16 O2 U A2491 45.281 136.632 98.475 1.00 36.60 O
ATOM 17 N3 U A2491 47.470 137.134 98.785 1.00 32.36 N
ATOM 18 C4 U A2491 48.599 137.917 98.642 1.00 31.99 C
ATOM 19 O4 U A2491 49.668 137.536 99.113 1.00 29.34 O
ATOM 20 C5 U A2491 48.396 139.123 97.909 1.00 33.55 C
ATOM 21 C6 U A2491 47.190 139.409 97.419 1.00 33.99 C
ATOM 22 P C A2492 42.301 141.006 100.557 1.00 37.15 P
ATOM 23 OP1 C A2492 40.962 141.613 100.789 1.00 36.91 O
ATOM 24 OP2 C A2492 43.502 141.606 101.191 1.00 34.19 O
ATOM 25 O5' C A2492 42.224 139.468 100.960 1.00 35.70 O
TER
ATOM 1 O3' U B2489 53.286 146.073 97.752 1.00 31.48 O
ATOM 2 P A B2490 52.399 145.330 98.858 1.00 31.50 P
ATOM 3 OP1 A B2490 51.428 146.307 99.385 1.00 32.31 O
ATOM 4 OP2 A B2490 53.310 144.641 99.790 1.00 35.66 O
ATOM 5 O5' A B2490 51.558 144.289 98.000 1.00 34.80 O
ATOM 6 C5' A B2490 51.652 142.900 98.237 1.00 35.15 C
ATOM 7 C4' A B2490 50.282 142.309 98.450 1.00 36.07 C
ATOM 8 O4' A B2490 50.491 141.023 99.080 1.00 37.89 O
ATOM 9 C3' A B2490 49.389 143.040 99.444 1.00 37.22 C
ATOM 10 O3' A B2490 48.070 142.510 99.319 1.00 37.76 O
ATOM 11 C2' A B2490 50.009 142.612 100.772 1.00 37.80 C
ATOM 12 O2' A B2490 49.128 142.665 101.873 1.00 39.93 O
ATOM 13 C1' A B2490 50.388 141.158 100.485 1.00 37.57 C
ATOM 14 N9 A B2490 51.682 140.801 101.063 1.00 37.23 N
ATOM 15 C8 A B2490 52.890 141.408 100.838 1.00 35.16 C
ATOM 16 N7 A B2490 53.876 140.888 101.521 1.00 36.80 N
ATOM 17 C5 A B2490 53.281 139.864 102.240 1.00 35.98 C
ATOM 18 C6 A B2490 53.791 138.945 103.163 1.00 36.79 C
ATOM 19 N6 A B2490 55.072 138.917 103.543 1.00 37.43 N
ATOM 20 N1 A B2490 52.933 138.049 103.698 1.00 35.08 N
ATOM 21 C2 A B2490 51.648 138.095 103.329 1.00 34.98 C
ATOM 22 N3 A B2490 51.048 138.919 102.479 1.00 35.35 N
ATOM 23 C4 A B2490 51.931 139.791 101.961 1.00 36.43 C
ATOM 24 P U B2491 46.854 143.428 98.801 1.00 36.89 P
ATOM 25 OP1 U B2491 47.246 144.137 97.560 1.00 39.16 O
ATOM 26 OP2 U B2491 46.365 144.195 99.954 1.00 37.33 O
ATOM 27 O5' U B2491 45.744 142.339 98.462 1.00 36.62 O
TER
ATOM 2 P U A2491 46.854 143.428 98.801 1.00 36.89 P
ATOM 3 OP1 U A2491 47.246 144.137 97.560 1.00 39.16 O
ATOM 4 OP2 U A2491 46.365 144.195 99.954 1.00 37.33 O
ATOM 5 O5' U A2491 45.744 142.339 98.462 1.00 36.62 O
ATOM 6 C5' U A2491 44.834 142.477 97.356 1.00 36.05 C
ATOM 7 C4' U A2491 44.090 141.175 97.146 1.00 35.46 C
ATOM 8 O4' U A2491 44.907 140.222 96.411 1.00 35.10 O
ATOM 9 C3' U A2491 43.733 140.468 98.442 1.00 33.13 C
ATOM 10 O3' U A2491 42.524 140.971 98.971 1.00 34.33 O
ATOM 11 C2' U A2491 43.654 139.011 98.022 1.00 32.83 C
ATOM 12 O2' U A2491 42.442 138.698 97.386 1.00 32.14 O
ATOM 13 C1' U A2491 44.790 138.932 96.999 1.00 33.40 C
ATOM 14 N1 U A2491 46.098 138.580 97.583 1.00 35.11 N
ATOM 15 C2 U A2491 46.214 137.393 98.294 1.00 33.76 C
ATOM 16 O2 U A2491 45.281 136.632 98.475 1.00 36.60 O
ATOM 17 N3 U A2491 47.470 137.134 98.785 1.00 32.36 N
ATOM 18 C4 U A2491 48.599 137.917 98.642 1.00 31.99 C
ATOM 19 O4 U A2491 49.668 137.536 99.113 1.00 29.34 O
ATOM 20 C5 U A2491 48.396 139.123 97.909 1.00 33.55 C
ATOM 21 C6 U A2491 47.190 139.409 97.419 1.00 33.99 C
ATOM 22 P C A2492 42.301 141.006 100.557 1.00 37.15 P
ATOM 23 OP1 C A2492 40.962 141.613 100.789 1.00 36.91 O
ATOM 24 OP2 C A2492 43.502 141.606 101.191 1.00 34.19 O
ATOM 25 O5' C A2492 42.224 139.468 100.960 1.00 35.70 O
TER
ATOM 1 O3' U B2489 53.286 146.073 97.752 1.00 31.48 O
ATOM 2 P A B2490 52.399 145.330 98.858 1.00 31.50 P
ATOM 3 OP1 A B2490 51.428 146.307 99.385 1.00 32.31 O
ATOM 4 OP2 A B2490 53.310 144.641 99.790 1.00 35.66 O
ATOM 5 O5' A B2490 51.558 144.289 98.000 1.00 34.80 O
ATOM 6 C5' A B2490 51.652 142.900 98.237 1.00 35.15 C
ATOM 7 C4' A B2490 50.282 142.309 98.450 1.00 36.07 C
ATOM 8 O4' A B2490 50.491 141.023 99.080 1.00 37.89 O
ATOM 9 C3' A B2490 49.389 143.040 99.444 1.00 37.22 C
ATOM 10 O3' A B2490 48.070 142.510 99.319 1.00 37.76 O
ATOM 11 C2' A B2490 50.009 142.612 100.772 1.00 37.80 C
ATOM 12 O2' A B2490 49.128 142.665 101.873 1.00 39.93 O
ATOM 13 C1' A B2490 50.388 141.158 100.485 1.00 37.57 C
ATOM 14 N9 A B2490 51.682 140.801 101.063 1.00 37.23 N
ATOM 15 C8 A B2490 52.890 141.408 100.838 1.00 35.16 C
ATOM 16 N7 A B2490 53.876 140.888 101.521 1.00 36.80 N
ATOM 17 C5 A B2490 53.281 139.864 102.240 1.00 35.98 C
ATOM 18 C6 A B2490 53.791 138.945 103.163 1.00 36.79 C
ATOM 19 N6 A B2490 55.072 138.917 103.543 1.00 37.43 N
ATOM 20 N1 A B2490 52.933 138.049 103.698 1.00 35.08 N
ATOM 21 C2 A B2490 51.648 138.095 103.329 1.00 34.98 C
ATOM 22 N3 A B2490 51.048 138.919 102.479 1.00 35.35 N
ATOM 23 C4 A B2490 51.931 139.791 101.961 1.00 36.43 C
ATOM 24 P U B2491 46.854 143.428 98.801 1.00 36.89 P
ATOM 25 OP1 U B2491 47.246 144.137 97.560 1.00 39.16 O
ATOM 26 OP2 U B2491 46.365 144.195 99.954 1.00 37.33 O
ATOM 27 O5' U B2491 45.744 142.339 98.462 1.00 36.62 O
TER
Atoms:
C4: (48.599,137.917,98.642)
N3: (47.470,137.134,98.785)
OP1: (47.246,144.137,97.560)
OP2: (46.365,144.195,99.954)
C2: (46.214,137.393,98.294)
C1': (44.790,138.932,96.999)
C3': (43.733,140.468,98.442)
O5': (45.744,142.339,98.462)
O4': (44.907,140.222,96.411)
C5': (44.834,142.477,97.356)
P: (46.854,143.428,98.801)
C4': (44.090,141.175,97.146)
C2': (43.654,139.011,98.022)
O2': (42.442,138.698,97.386)
N1: (46.098,138.580,97.583)
O4: (49.668,137.536,99.113)
O2: (45.281,136.632,98.475)
C6: (47.190,139.409,97.419)
C5: (48.396,139.123,97.909)
O3': (42.524,140.971,98.971)
N3: (47.470,137.134,98.785)
OP1: (47.246,144.137,97.560)
OP2: (46.365,144.195,99.954)
C2: (46.214,137.393,98.294)
C1': (44.790,138.932,96.999)
C3': (43.733,140.468,98.442)
O5': (45.744,142.339,98.462)
O4': (44.907,140.222,96.411)
C5': (44.834,142.477,97.356)
P: (46.854,143.428,98.801)
C4': (44.090,141.175,97.146)
C2': (43.654,139.011,98.022)
O2': (42.442,138.698,97.386)
N1: (46.098,138.580,97.583)
O4: (49.668,137.536,99.113)
O2: (45.281,136.632,98.475)
C6: (47.190,139.409,97.419)
C5: (48.396,139.123,97.909)
O3': (42.524,140.971,98.971)
OP1: (51.428,146.307,99.385)
OP2: (53.310,144.641,99.790)
C3': (49.389,143.040,99.444)
C1': (50.388,141.158,100.485)
C5': (51.652,142.900,98.237)
O4': (50.491,141.023,99.080)
C8: (52.890,141.408,100.838)
O2': (49.128,142.665,101.873)
C6: (53.791,138.945,103.163)
C5: (53.281,139.864,102.240)
C4: (51.931,139.791,101.961)
P: (52.399,145.330,98.858)
C4': (50.282,142.309,98.450)
C2': (50.009,142.612,100.772)
C2: (51.648,138.095,103.329)
N1: (52.933,138.049,103.698)
N3: (51.048,138.919,102.479)
N6: (55.072,138.917,103.543)
N7: (53.876,140.888,101.521)
N9: (51.682,140.801,101.063)
O5': (51.558,144.289,98.000)
O3': (48.070,142.510,99.319)
OP2: (53.310,144.641,99.790)
C3': (49.389,143.040,99.444)
C1': (50.388,141.158,100.485)
C5': (51.652,142.900,98.237)
O4': (50.491,141.023,99.080)
C8: (52.890,141.408,100.838)
O2': (49.128,142.665,101.873)
C6: (53.791,138.945,103.163)
C5: (53.281,139.864,102.240)
C4: (51.931,139.791,101.961)
P: (52.399,145.330,98.858)
C4': (50.282,142.309,98.450)
C2': (50.009,142.612,100.772)
C2: (51.648,138.095,103.329)
N1: (52.933,138.049,103.698)
N3: (51.048,138.919,102.479)
N6: (55.072,138.917,103.543)
N7: (53.876,140.888,101.521)
N9: (51.682,140.801,101.063)
O5': (51.558,144.289,98.000)
O3': (48.070,142.510,99.319)
Image (generated by PyMOL):