Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01247:01245
Extra
PDB:
ATOM 1 O3' A A1246 16.331 85.540 91.038 1.00 40.72 O
ATOM 2 P U A1247 17.064 85.959 89.672 1.00 39.93 P
ATOM 3 OP1 U A1247 18.063 86.980 90.045 1.00 42.55 O
ATOM 4 OP2 U A1247 16.048 86.285 88.652 1.00 39.58 O
ATOM 5 O5' U A1247 17.814 84.631 89.214 1.00 40.31 O
ATOM 6 C5' U A1247 19.074 84.251 89.793 1.00 40.20 C
ATOM 7 C4' U A1247 19.501 82.902 89.270 1.00 41.35 C
ATOM 8 O4' U A1247 18.494 81.918 89.620 1.00 41.96 O
ATOM 9 C3' U A1247 19.602 82.776 87.761 1.00 42.31 C
ATOM 10 O3' U A1247 20.818 83.297 87.252 1.00 46.03 O
ATOM 11 C2' U A1247 19.473 81.273 87.565 1.00 41.20 C
ATOM 12 O2' U A1247 20.634 80.549 87.915 1.00 41.96 O
ATOM 13 C1' U A1247 18.388 80.946 88.587 1.00 40.31 C
ATOM 14 N1 U A1247 17.039 81.023 88.002 1.00 38.49 N
ATOM 15 C2 U A1247 16.621 79.978 87.188 1.00 36.27 C
ATOM 16 O2 U A1247 17.311 79.006 86.949 1.00 35.00 O
ATOM 17 N3 U A1247 15.362 80.117 86.667 1.00 35.00 N
ATOM 18 C4 U A1247 14.493 81.167 86.870 1.00 37.98 C
ATOM 19 O4 U A1247 13.388 81.149 86.331 1.00 40.67 O
ATOM 20 C5 U A1247 14.992 82.205 87.723 1.00 39.37 C
ATOM 21 C6 U A1247 16.215 82.100 88.246 1.00 38.36 C
ATOM 22 P C A1248 20.789 84.348 86.034 1.00 47.64 P
ATOM 23 OP1 C A1248 19.726 83.960 85.071 1.00 47.57 O
ATOM 24 OP2 C A1248 22.190 84.455 85.560 1.00 48.02 O
ATOM 25 O5' C A1248 20.393 85.728 86.729 1.00 46.89 O
TER
ATOM 1 O3' U B1244 8.434 83.188 84.175 1.00 42.99 O
ATOM 2 P A B1245 8.870 84.080 85.431 1.00 44.29 P
ATOM 3 OP1 A B1245 8.788 83.228 86.643 1.00 43.32 O
ATOM 4 OP2 A B1245 8.120 85.356 85.378 1.00 41.44 O
ATOM 5 O5' A B1245 10.401 84.400 85.145 1.00 44.76 O
ATOM 6 C5' A B1245 11.416 83.404 85.338 1.00 44.64 C
ATOM 7 C4' A B1245 12.785 84.042 85.279 1.00 45.80 C
ATOM 8 O4' A B1245 13.069 84.503 83.928 1.00 47.00 O
ATOM 9 C3' A B1245 12.970 85.295 86.116 1.00 45.04 C
ATOM 10 O3' A B1245 13.165 84.994 87.487 1.00 44.94 O
ATOM 11 C2' A B1245 14.194 85.918 85.466 1.00 45.38 C
ATOM 12 O2' A B1245 15.391 85.251 85.820 1.00 45.02 O
ATOM 13 C1' A B1245 13.910 85.645 83.988 1.00 46.62 C
ATOM 14 N9 A B1245 13.244 86.764 83.318 1.00 47.88 N
ATOM 15 C8 A B1245 11.920 87.121 83.368 1.00 49.40 C
ATOM 16 N7 A B1245 11.635 88.199 82.678 1.00 49.66 N
ATOM 17 C5 A B1245 12.853 88.575 82.129 1.00 49.09 C
ATOM 18 C6 A B1245 13.227 89.645 81.295 1.00 47.85 C
ATOM 19 N6 A B1245 12.374 90.560 80.832 1.00 46.49 N
ATOM 20 N1 A B1245 14.524 89.740 80.942 1.00 47.67 N
ATOM 21 C2 A B1245 15.378 88.813 81.387 1.00 48.87 C
ATOM 22 N3 A B1245 15.149 87.758 82.163 1.00 49.50 N
ATOM 23 C4 A B1245 13.851 87.696 82.508 1.00 49.24 C
ATOM 24 P A B1246 12.013 85.358 88.542 1.00 45.75 P
ATOM 25 OP1 A B1246 10.852 84.508 88.189 1.00 48.93 O
ATOM 26 OP2 A B1246 11.844 86.822 88.609 1.00 44.72 O
ATOM 27 O5' A B1246 12.583 84.824 89.927 1.00 44.76 O
TER
ATOM 2 P U A1247 17.064 85.959 89.672 1.00 39.93 P
ATOM 3 OP1 U A1247 18.063 86.980 90.045 1.00 42.55 O
ATOM 4 OP2 U A1247 16.048 86.285 88.652 1.00 39.58 O
ATOM 5 O5' U A1247 17.814 84.631 89.214 1.00 40.31 O
ATOM 6 C5' U A1247 19.074 84.251 89.793 1.00 40.20 C
ATOM 7 C4' U A1247 19.501 82.902 89.270 1.00 41.35 C
ATOM 8 O4' U A1247 18.494 81.918 89.620 1.00 41.96 O
ATOM 9 C3' U A1247 19.602 82.776 87.761 1.00 42.31 C
ATOM 10 O3' U A1247 20.818 83.297 87.252 1.00 46.03 O
ATOM 11 C2' U A1247 19.473 81.273 87.565 1.00 41.20 C
ATOM 12 O2' U A1247 20.634 80.549 87.915 1.00 41.96 O
ATOM 13 C1' U A1247 18.388 80.946 88.587 1.00 40.31 C
ATOM 14 N1 U A1247 17.039 81.023 88.002 1.00 38.49 N
ATOM 15 C2 U A1247 16.621 79.978 87.188 1.00 36.27 C
ATOM 16 O2 U A1247 17.311 79.006 86.949 1.00 35.00 O
ATOM 17 N3 U A1247 15.362 80.117 86.667 1.00 35.00 N
ATOM 18 C4 U A1247 14.493 81.167 86.870 1.00 37.98 C
ATOM 19 O4 U A1247 13.388 81.149 86.331 1.00 40.67 O
ATOM 20 C5 U A1247 14.992 82.205 87.723 1.00 39.37 C
ATOM 21 C6 U A1247 16.215 82.100 88.246 1.00 38.36 C
ATOM 22 P C A1248 20.789 84.348 86.034 1.00 47.64 P
ATOM 23 OP1 C A1248 19.726 83.960 85.071 1.00 47.57 O
ATOM 24 OP2 C A1248 22.190 84.455 85.560 1.00 48.02 O
ATOM 25 O5' C A1248 20.393 85.728 86.729 1.00 46.89 O
TER
ATOM 1 O3' U B1244 8.434 83.188 84.175 1.00 42.99 O
ATOM 2 P A B1245 8.870 84.080 85.431 1.00 44.29 P
ATOM 3 OP1 A B1245 8.788 83.228 86.643 1.00 43.32 O
ATOM 4 OP2 A B1245 8.120 85.356 85.378 1.00 41.44 O
ATOM 5 O5' A B1245 10.401 84.400 85.145 1.00 44.76 O
ATOM 6 C5' A B1245 11.416 83.404 85.338 1.00 44.64 C
ATOM 7 C4' A B1245 12.785 84.042 85.279 1.00 45.80 C
ATOM 8 O4' A B1245 13.069 84.503 83.928 1.00 47.00 O
ATOM 9 C3' A B1245 12.970 85.295 86.116 1.00 45.04 C
ATOM 10 O3' A B1245 13.165 84.994 87.487 1.00 44.94 O
ATOM 11 C2' A B1245 14.194 85.918 85.466 1.00 45.38 C
ATOM 12 O2' A B1245 15.391 85.251 85.820 1.00 45.02 O
ATOM 13 C1' A B1245 13.910 85.645 83.988 1.00 46.62 C
ATOM 14 N9 A B1245 13.244 86.764 83.318 1.00 47.88 N
ATOM 15 C8 A B1245 11.920 87.121 83.368 1.00 49.40 C
ATOM 16 N7 A B1245 11.635 88.199 82.678 1.00 49.66 N
ATOM 17 C5 A B1245 12.853 88.575 82.129 1.00 49.09 C
ATOM 18 C6 A B1245 13.227 89.645 81.295 1.00 47.85 C
ATOM 19 N6 A B1245 12.374 90.560 80.832 1.00 46.49 N
ATOM 20 N1 A B1245 14.524 89.740 80.942 1.00 47.67 N
ATOM 21 C2 A B1245 15.378 88.813 81.387 1.00 48.87 C
ATOM 22 N3 A B1245 15.149 87.758 82.163 1.00 49.50 N
ATOM 23 C4 A B1245 13.851 87.696 82.508 1.00 49.24 C
ATOM 24 P A B1246 12.013 85.358 88.542 1.00 45.75 P
ATOM 25 OP1 A B1246 10.852 84.508 88.189 1.00 48.93 O
ATOM 26 OP2 A B1246 11.844 86.822 88.609 1.00 44.72 O
ATOM 27 O5' A B1246 12.583 84.824 89.927 1.00 44.76 O
TER
Atoms:
C4: (14.493,81.167,86.870)
N3: (15.362,80.117,86.667)
OP1: (18.063,86.980,90.045)
OP2: (16.048,86.285,88.652)
C2: (16.621,79.978,87.188)
C1': (18.388,80.946,88.587)
C3': (19.602,82.776,87.761)
O5': (17.814,84.631,89.214)
O4': (18.494,81.918,89.620)
C5': (19.074,84.251,89.793)
P: (17.064,85.959,89.672)
C4': (19.501,82.902,89.270)
C2': (19.473,81.273,87.565)
O2': (20.634,80.549,87.915)
N1: (17.039,81.023,88.002)
O4: (13.388,81.149,86.331)
O2: (17.311,79.006,86.949)
C6: (16.215,82.100,88.246)
C5: (14.992,82.205,87.723)
O3': (20.818,83.297,87.252)
N3: (15.362,80.117,86.667)
OP1: (18.063,86.980,90.045)
OP2: (16.048,86.285,88.652)
C2: (16.621,79.978,87.188)
C1': (18.388,80.946,88.587)
C3': (19.602,82.776,87.761)
O5': (17.814,84.631,89.214)
O4': (18.494,81.918,89.620)
C5': (19.074,84.251,89.793)
P: (17.064,85.959,89.672)
C4': (19.501,82.902,89.270)
C2': (19.473,81.273,87.565)
O2': (20.634,80.549,87.915)
N1: (17.039,81.023,88.002)
O4: (13.388,81.149,86.331)
O2: (17.311,79.006,86.949)
C6: (16.215,82.100,88.246)
C5: (14.992,82.205,87.723)
O3': (20.818,83.297,87.252)
OP1: (8.788,83.228,86.643)
OP2: (8.120,85.356,85.378)
C3': (12.970,85.295,86.116)
C1': (13.910,85.645,83.988)
C5': (11.416,83.404,85.338)
O4': (13.069,84.503,83.928)
C8: (11.920,87.121,83.368)
O2': (15.391,85.251,85.820)
C6: (13.227,89.645,81.295)
C5: (12.853,88.575,82.129)
C4: (13.851,87.696,82.508)
P: (8.870,84.080,85.431)
C4': (12.785,84.042,85.279)
C2': (14.194,85.918,85.466)
C2: (15.378,88.813,81.387)
N1: (14.524,89.740,80.942)
N3: (15.149,87.758,82.163)
N6: (12.374,90.560,80.832)
N7: (11.635,88.199,82.678)
N9: (13.244,86.764,83.318)
O5': (10.401,84.400,85.145)
O3': (13.165,84.994,87.487)
OP2: (8.120,85.356,85.378)
C3': (12.970,85.295,86.116)
C1': (13.910,85.645,83.988)
C5': (11.416,83.404,85.338)
O4': (13.069,84.503,83.928)
C8: (11.920,87.121,83.368)
O2': (15.391,85.251,85.820)
C6: (13.227,89.645,81.295)
C5: (12.853,88.575,82.129)
C4: (13.851,87.696,82.508)
P: (8.870,84.080,85.431)
C4': (12.785,84.042,85.279)
C2': (14.194,85.918,85.466)
C2: (15.378,88.813,81.387)
N1: (14.524,89.740,80.942)
N3: (15.149,87.758,82.163)
N6: (12.374,90.560,80.832)
N7: (11.635,88.199,82.678)
N9: (13.244,86.764,83.318)
O5': (10.401,84.400,85.145)
O3': (13.165,84.994,87.487)
Image (generated by PyMOL):