Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01247:01245
Extra
PDB:
ATOM 1 O3' A A1246 16.293 85.558 91.007 1.00 45.10 O
ATOM 2 P U A1247 16.967 86.020 89.622 1.00 45.05 P
ATOM 3 OP1 U A1247 17.923 87.107 89.939 1.00 44.68 O
ATOM 4 OP2 U A1247 15.889 86.264 88.643 1.00 46.08 O
ATOM 5 O5' U A1247 17.777 84.739 89.133 1.00 45.16 O
ATOM 6 C5' U A1247 19.006 84.353 89.769 1.00 44.78 C
ATOM 7 C4' U A1247 19.444 82.998 89.273 1.00 45.13 C
ATOM 8 O4' U A1247 18.434 82.019 89.623 1.00 44.84 O
ATOM 9 C3' U A1247 19.569 82.846 87.770 1.00 45.67 C
ATOM 10 O3' U A1247 20.792 83.364 87.269 1.00 49.92 O
ATOM 11 C2' U A1247 19.450 81.338 87.599 1.00 44.33 C
ATOM 12 O2' U A1247 20.609 80.617 87.961 1.00 44.04 O
ATOM 13 C1' U A1247 18.356 81.023 88.613 1.00 43.35 C
ATOM 14 N1 U A1247 17.016 81.077 88.013 1.00 43.10 N
ATOM 15 C2 U A1247 16.655 80.072 87.125 1.00 42.03 C
ATOM 16 O2 U A1247 17.397 79.155 86.819 1.00 40.98 O
ATOM 17 N3 U A1247 15.390 80.187 86.608 1.00 41.52 N
ATOM 18 C4 U A1247 14.470 81.181 86.876 1.00 42.71 C
ATOM 19 O4 U A1247 13.366 81.142 86.340 1.00 43.68 O
ATOM 20 C5 U A1247 14.918 82.181 87.796 1.00 44.15 C
ATOM 21 C6 U A1247 16.141 82.097 88.321 1.00 43.65 C
ATOM 22 P C A1248 20.779 84.377 86.016 1.00 50.66 P
ATOM 23 OP1 C A1248 19.652 84.029 85.116 1.00 50.10 O
ATOM 24 OP2 C A1248 22.162 84.367 85.481 1.00 51.27 O
ATOM 25 O5' C A1248 20.519 85.805 86.682 1.00 50.33 O
TER
ATOM 1 O3' U B1244 8.487 83.269 84.136 1.00 48.96 O
ATOM 2 P A B1245 8.918 84.151 85.405 1.00 48.53 P
ATOM 3 OP1 A B1245 8.827 83.289 86.608 1.00 46.22 O
ATOM 4 OP2 A B1245 8.193 85.447 85.374 1.00 46.83 O
ATOM 5 O5' A B1245 10.452 84.463 85.124 1.00 49.63 O
ATOM 6 C5' A B1245 11.465 83.463 85.321 1.00 48.98 C
ATOM 7 C4' A B1245 12.828 84.105 85.302 1.00 49.69 C
ATOM 8 O4' A B1245 13.131 84.585 83.965 1.00 51.25 O
ATOM 9 C3' A B1245 12.966 85.352 86.156 1.00 49.67 C
ATOM 10 O3' A B1245 13.130 85.030 87.525 1.00 48.72 O
ATOM 11 C2' A B1245 14.189 86.018 85.538 1.00 51.04 C
ATOM 12 O2' A B1245 15.417 85.410 85.904 1.00 52.47 O
ATOM 13 C1' A B1245 13.947 85.745 84.054 1.00 51.88 C
ATOM 14 N9 A B1245 13.270 86.854 83.384 1.00 52.91 N
ATOM 15 C8 A B1245 11.949 87.211 83.457 1.00 54.00 C
ATOM 16 N7 A B1245 11.650 88.276 82.753 1.00 54.52 N
ATOM 17 C5 A B1245 12.856 88.642 82.174 1.00 53.38 C
ATOM 18 C6 A B1245 13.213 89.697 81.315 1.00 52.53 C
ATOM 19 N6 A B1245 12.353 90.609 80.861 1.00 51.05 N
ATOM 20 N1 A B1245 14.501 89.780 80.930 1.00 52.29 N
ATOM 21 C2 A B1245 15.361 88.859 81.374 1.00 52.67 C
ATOM 22 N3 A B1245 15.148 87.823 82.176 1.00 52.81 N
ATOM 23 C4 A B1245 13.860 87.771 82.549 1.00 53.29 C
ATOM 24 P A B1246 12.018 85.491 88.581 1.00 48.57 P
ATOM 25 OP1 A B1246 10.774 84.763 88.245 1.00 50.82 O
ATOM 26 OP2 A B1246 12.003 86.969 88.636 1.00 49.12 O
ATOM 27 O5' A B1246 12.544 84.895 89.958 1.00 47.24 O
TER
ATOM 2 P U A1247 16.967 86.020 89.622 1.00 45.05 P
ATOM 3 OP1 U A1247 17.923 87.107 89.939 1.00 44.68 O
ATOM 4 OP2 U A1247 15.889 86.264 88.643 1.00 46.08 O
ATOM 5 O5' U A1247 17.777 84.739 89.133 1.00 45.16 O
ATOM 6 C5' U A1247 19.006 84.353 89.769 1.00 44.78 C
ATOM 7 C4' U A1247 19.444 82.998 89.273 1.00 45.13 C
ATOM 8 O4' U A1247 18.434 82.019 89.623 1.00 44.84 O
ATOM 9 C3' U A1247 19.569 82.846 87.770 1.00 45.67 C
ATOM 10 O3' U A1247 20.792 83.364 87.269 1.00 49.92 O
ATOM 11 C2' U A1247 19.450 81.338 87.599 1.00 44.33 C
ATOM 12 O2' U A1247 20.609 80.617 87.961 1.00 44.04 O
ATOM 13 C1' U A1247 18.356 81.023 88.613 1.00 43.35 C
ATOM 14 N1 U A1247 17.016 81.077 88.013 1.00 43.10 N
ATOM 15 C2 U A1247 16.655 80.072 87.125 1.00 42.03 C
ATOM 16 O2 U A1247 17.397 79.155 86.819 1.00 40.98 O
ATOM 17 N3 U A1247 15.390 80.187 86.608 1.00 41.52 N
ATOM 18 C4 U A1247 14.470 81.181 86.876 1.00 42.71 C
ATOM 19 O4 U A1247 13.366 81.142 86.340 1.00 43.68 O
ATOM 20 C5 U A1247 14.918 82.181 87.796 1.00 44.15 C
ATOM 21 C6 U A1247 16.141 82.097 88.321 1.00 43.65 C
ATOM 22 P C A1248 20.779 84.377 86.016 1.00 50.66 P
ATOM 23 OP1 C A1248 19.652 84.029 85.116 1.00 50.10 O
ATOM 24 OP2 C A1248 22.162 84.367 85.481 1.00 51.27 O
ATOM 25 O5' C A1248 20.519 85.805 86.682 1.00 50.33 O
TER
ATOM 1 O3' U B1244 8.487 83.269 84.136 1.00 48.96 O
ATOM 2 P A B1245 8.918 84.151 85.405 1.00 48.53 P
ATOM 3 OP1 A B1245 8.827 83.289 86.608 1.00 46.22 O
ATOM 4 OP2 A B1245 8.193 85.447 85.374 1.00 46.83 O
ATOM 5 O5' A B1245 10.452 84.463 85.124 1.00 49.63 O
ATOM 6 C5' A B1245 11.465 83.463 85.321 1.00 48.98 C
ATOM 7 C4' A B1245 12.828 84.105 85.302 1.00 49.69 C
ATOM 8 O4' A B1245 13.131 84.585 83.965 1.00 51.25 O
ATOM 9 C3' A B1245 12.966 85.352 86.156 1.00 49.67 C
ATOM 10 O3' A B1245 13.130 85.030 87.525 1.00 48.72 O
ATOM 11 C2' A B1245 14.189 86.018 85.538 1.00 51.04 C
ATOM 12 O2' A B1245 15.417 85.410 85.904 1.00 52.47 O
ATOM 13 C1' A B1245 13.947 85.745 84.054 1.00 51.88 C
ATOM 14 N9 A B1245 13.270 86.854 83.384 1.00 52.91 N
ATOM 15 C8 A B1245 11.949 87.211 83.457 1.00 54.00 C
ATOM 16 N7 A B1245 11.650 88.276 82.753 1.00 54.52 N
ATOM 17 C5 A B1245 12.856 88.642 82.174 1.00 53.38 C
ATOM 18 C6 A B1245 13.213 89.697 81.315 1.00 52.53 C
ATOM 19 N6 A B1245 12.353 90.609 80.861 1.00 51.05 N
ATOM 20 N1 A B1245 14.501 89.780 80.930 1.00 52.29 N
ATOM 21 C2 A B1245 15.361 88.859 81.374 1.00 52.67 C
ATOM 22 N3 A B1245 15.148 87.823 82.176 1.00 52.81 N
ATOM 23 C4 A B1245 13.860 87.771 82.549 1.00 53.29 C
ATOM 24 P A B1246 12.018 85.491 88.581 1.00 48.57 P
ATOM 25 OP1 A B1246 10.774 84.763 88.245 1.00 50.82 O
ATOM 26 OP2 A B1246 12.003 86.969 88.636 1.00 49.12 O
ATOM 27 O5' A B1246 12.544 84.895 89.958 1.00 47.24 O
TER
Atoms:
C4: (14.470,81.181,86.876)
N3: (15.390,80.187,86.608)
OP1: (17.923,87.107,89.939)
OP2: (15.889,86.264,88.643)
C2: (16.655,80.072,87.125)
C1': (18.356,81.023,88.613)
C3': (19.569,82.846,87.770)
O5': (17.777,84.739,89.133)
O4': (18.434,82.019,89.623)
C5': (19.006,84.353,89.769)
P: (16.967,86.020,89.622)
C4': (19.444,82.998,89.273)
C2': (19.450,81.338,87.599)
O2': (20.609,80.617,87.961)
N1: (17.016,81.077,88.013)
O4: (13.366,81.142,86.340)
O2: (17.397,79.155,86.819)
C6: (16.141,82.097,88.321)
C5: (14.918,82.181,87.796)
O3': (20.792,83.364,87.269)
N3: (15.390,80.187,86.608)
OP1: (17.923,87.107,89.939)
OP2: (15.889,86.264,88.643)
C2: (16.655,80.072,87.125)
C1': (18.356,81.023,88.613)
C3': (19.569,82.846,87.770)
O5': (17.777,84.739,89.133)
O4': (18.434,82.019,89.623)
C5': (19.006,84.353,89.769)
P: (16.967,86.020,89.622)
C4': (19.444,82.998,89.273)
C2': (19.450,81.338,87.599)
O2': (20.609,80.617,87.961)
N1: (17.016,81.077,88.013)
O4: (13.366,81.142,86.340)
O2: (17.397,79.155,86.819)
C6: (16.141,82.097,88.321)
C5: (14.918,82.181,87.796)
O3': (20.792,83.364,87.269)
OP1: (8.827,83.289,86.608)
OP2: (8.193,85.447,85.374)
C3': (12.966,85.352,86.156)
C1': (13.947,85.745,84.054)
C5': (11.465,83.463,85.321)
O4': (13.131,84.585,83.965)
C8: (11.949,87.211,83.457)
O2': (15.417,85.410,85.904)
C6: (13.213,89.697,81.315)
C5: (12.856,88.642,82.174)
C4: (13.860,87.771,82.549)
P: (8.918,84.151,85.405)
C4': (12.828,84.105,85.302)
C2': (14.189,86.018,85.538)
C2: (15.361,88.859,81.374)
N1: (14.501,89.780,80.930)
N3: (15.148,87.823,82.176)
N6: (12.353,90.609,80.861)
N7: (11.650,88.276,82.753)
N9: (13.270,86.854,83.384)
O5': (10.452,84.463,85.124)
O3': (13.130,85.030,87.525)
OP2: (8.193,85.447,85.374)
C3': (12.966,85.352,86.156)
C1': (13.947,85.745,84.054)
C5': (11.465,83.463,85.321)
O4': (13.131,84.585,83.965)
C8: (11.949,87.211,83.457)
O2': (15.417,85.410,85.904)
C6: (13.213,89.697,81.315)
C5: (12.856,88.642,82.174)
C4: (13.860,87.771,82.549)
P: (8.918,84.151,85.405)
C4': (12.828,84.105,85.302)
C2': (14.189,86.018,85.538)
C2: (15.361,88.859,81.374)
N1: (14.501,89.780,80.930)
N3: (15.148,87.823,82.176)
N6: (12.353,90.609,80.861)
N7: (11.650,88.276,82.753)
N9: (13.270,86.854,83.384)
O5': (10.452,84.463,85.124)
O3': (13.130,85.030,87.525)
Image (generated by PyMOL):