Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02491:02490
Extra
PDB:
ATOM 1 O3' A A2490 48.066 142.520 99.314 1.00 39.85 O
ATOM 2 P U A2491 46.845 143.355 98.704 1.00 40.87 P
ATOM 3 OP1 U A2491 47.391 144.365 97.768 1.00 39.24 O
ATOM 4 OP2 U A2491 45.973 143.780 99.821 1.00 40.81 O
ATOM 5 O5' U A2491 46.071 142.249 97.865 1.00 40.95 O
ATOM 6 C5' U A2491 44.787 142.496 97.274 1.00 39.75 C
ATOM 7 C4' U A2491 44.038 141.191 97.145 1.00 38.93 C
ATOM 8 O4' U A2491 44.847 140.237 96.401 1.00 38.46 O
ATOM 9 C3' U A2491 43.785 140.517 98.477 1.00 36.89 C
ATOM 10 O3' U A2491 42.584 141.014 99.038 1.00 37.17 O
ATOM 11 C2' U A2491 43.705 139.046 98.101 1.00 36.53 C
ATOM 12 O2' U A2491 42.465 138.685 97.551 1.00 37.10 O
ATOM 13 C1' U A2491 44.764 138.956 97.003 1.00 36.98 C
ATOM 14 N1 U A2491 46.099 138.594 97.507 1.00 38.47 N
ATOM 15 C2 U A2491 46.257 137.361 98.118 1.00 39.49 C
ATOM 16 O2 U A2491 45.350 136.555 98.233 1.00 40.53 O
ATOM 17 N3 U A2491 47.522 137.106 98.588 1.00 39.31 N
ATOM 18 C4 U A2491 48.624 137.935 98.505 1.00 39.60 C
ATOM 19 O4 U A2491 49.695 137.579 98.999 1.00 38.13 O
ATOM 20 C5 U A2491 48.381 139.175 97.847 1.00 40.28 C
ATOM 21 C6 U A2491 47.161 139.456 97.384 1.00 39.04 C
ATOM 22 P C A2492 42.371 140.981 100.625 1.00 40.22 P
ATOM 23 OP1 C A2492 41.031 141.558 100.895 1.00 39.81 O
ATOM 24 OP2 C A2492 43.571 141.582 101.267 1.00 39.86 O
ATOM 25 O5' C A2492 42.315 139.428 100.977 1.00 37.80 O
TER
ATOM 1 O3' U B2489 53.248 145.792 97.439 1.00 37.81 O
ATOM 2 P A B2490 52.688 145.302 98.858 1.00 39.50 P
ATOM 3 OP1 A B2490 52.378 146.511 99.629 1.00 41.59 O
ATOM 4 OP2 A B2490 53.564 144.269 99.444 1.00 41.94 O
ATOM 5 O5' A B2490 51.299 144.625 98.517 1.00 38.58 O
ATOM 6 C5' A B2490 51.214 143.482 97.664 1.00 37.03 C
ATOM 7 C4' A B2490 50.228 142.511 98.241 1.00 38.95 C
ATOM 8 O4' A B2490 50.952 141.406 98.828 1.00 39.47 O
ATOM 9 C3' A B2490 49.354 143.092 99.346 1.00 40.08 C
ATOM 10 O3' A B2490 48.066 142.520 99.314 1.00 39.85 O
ATOM 11 C2' A B2490 50.088 142.661 100.610 1.00 41.48 C
ATOM 12 O2' A B2490 49.215 142.509 101.706 1.00 43.91 O
ATOM 13 C1' A B2490 50.639 141.302 100.198 1.00 40.20 C
ATOM 14 N9 A B2490 51.861 140.919 100.898 1.00 40.36 N
ATOM 15 C8 A B2490 53.108 141.468 100.768 1.00 39.94 C
ATOM 16 N7 A B2490 54.029 140.857 101.469 1.00 40.86 N
ATOM 17 C5 A B2490 53.337 139.849 102.121 1.00 40.04 C
ATOM 18 C6 A B2490 53.747 138.845 103.009 1.00 39.92 C
ATOM 19 N6 A B2490 55.012 138.668 103.396 1.00 39.84 N
ATOM 20 N1 A B2490 52.802 138.011 103.489 1.00 39.75 N
ATOM 21 C2 A B2490 51.537 138.178 103.093 1.00 39.45 C
ATOM 22 N3 A B2490 51.031 139.073 102.256 1.00 40.84 N
ATOM 23 C4 A B2490 51.996 139.890 101.797 1.00 40.93 C
ATOM 24 P U B2491 46.845 143.355 98.704 1.00 40.87 P
ATOM 25 OP1 U B2491 47.391 144.365 97.768 1.00 39.24 O
ATOM 26 OP2 U B2491 45.973 143.780 99.821 1.00 40.81 O
ATOM 27 O5' U B2491 46.071 142.249 97.865 1.00 40.95 O
TER
ATOM 2 P U A2491 46.845 143.355 98.704 1.00 40.87 P
ATOM 3 OP1 U A2491 47.391 144.365 97.768 1.00 39.24 O
ATOM 4 OP2 U A2491 45.973 143.780 99.821 1.00 40.81 O
ATOM 5 O5' U A2491 46.071 142.249 97.865 1.00 40.95 O
ATOM 6 C5' U A2491 44.787 142.496 97.274 1.00 39.75 C
ATOM 7 C4' U A2491 44.038 141.191 97.145 1.00 38.93 C
ATOM 8 O4' U A2491 44.847 140.237 96.401 1.00 38.46 O
ATOM 9 C3' U A2491 43.785 140.517 98.477 1.00 36.89 C
ATOM 10 O3' U A2491 42.584 141.014 99.038 1.00 37.17 O
ATOM 11 C2' U A2491 43.705 139.046 98.101 1.00 36.53 C
ATOM 12 O2' U A2491 42.465 138.685 97.551 1.00 37.10 O
ATOM 13 C1' U A2491 44.764 138.956 97.003 1.00 36.98 C
ATOM 14 N1 U A2491 46.099 138.594 97.507 1.00 38.47 N
ATOM 15 C2 U A2491 46.257 137.361 98.118 1.00 39.49 C
ATOM 16 O2 U A2491 45.350 136.555 98.233 1.00 40.53 O
ATOM 17 N3 U A2491 47.522 137.106 98.588 1.00 39.31 N
ATOM 18 C4 U A2491 48.624 137.935 98.505 1.00 39.60 C
ATOM 19 O4 U A2491 49.695 137.579 98.999 1.00 38.13 O
ATOM 20 C5 U A2491 48.381 139.175 97.847 1.00 40.28 C
ATOM 21 C6 U A2491 47.161 139.456 97.384 1.00 39.04 C
ATOM 22 P C A2492 42.371 140.981 100.625 1.00 40.22 P
ATOM 23 OP1 C A2492 41.031 141.558 100.895 1.00 39.81 O
ATOM 24 OP2 C A2492 43.571 141.582 101.267 1.00 39.86 O
ATOM 25 O5' C A2492 42.315 139.428 100.977 1.00 37.80 O
TER
ATOM 1 O3' U B2489 53.248 145.792 97.439 1.00 37.81 O
ATOM 2 P A B2490 52.688 145.302 98.858 1.00 39.50 P
ATOM 3 OP1 A B2490 52.378 146.511 99.629 1.00 41.59 O
ATOM 4 OP2 A B2490 53.564 144.269 99.444 1.00 41.94 O
ATOM 5 O5' A B2490 51.299 144.625 98.517 1.00 38.58 O
ATOM 6 C5' A B2490 51.214 143.482 97.664 1.00 37.03 C
ATOM 7 C4' A B2490 50.228 142.511 98.241 1.00 38.95 C
ATOM 8 O4' A B2490 50.952 141.406 98.828 1.00 39.47 O
ATOM 9 C3' A B2490 49.354 143.092 99.346 1.00 40.08 C
ATOM 10 O3' A B2490 48.066 142.520 99.314 1.00 39.85 O
ATOM 11 C2' A B2490 50.088 142.661 100.610 1.00 41.48 C
ATOM 12 O2' A B2490 49.215 142.509 101.706 1.00 43.91 O
ATOM 13 C1' A B2490 50.639 141.302 100.198 1.00 40.20 C
ATOM 14 N9 A B2490 51.861 140.919 100.898 1.00 40.36 N
ATOM 15 C8 A B2490 53.108 141.468 100.768 1.00 39.94 C
ATOM 16 N7 A B2490 54.029 140.857 101.469 1.00 40.86 N
ATOM 17 C5 A B2490 53.337 139.849 102.121 1.00 40.04 C
ATOM 18 C6 A B2490 53.747 138.845 103.009 1.00 39.92 C
ATOM 19 N6 A B2490 55.012 138.668 103.396 1.00 39.84 N
ATOM 20 N1 A B2490 52.802 138.011 103.489 1.00 39.75 N
ATOM 21 C2 A B2490 51.537 138.178 103.093 1.00 39.45 C
ATOM 22 N3 A B2490 51.031 139.073 102.256 1.00 40.84 N
ATOM 23 C4 A B2490 51.996 139.890 101.797 1.00 40.93 C
ATOM 24 P U B2491 46.845 143.355 98.704 1.00 40.87 P
ATOM 25 OP1 U B2491 47.391 144.365 97.768 1.00 39.24 O
ATOM 26 OP2 U B2491 45.973 143.780 99.821 1.00 40.81 O
ATOM 27 O5' U B2491 46.071 142.249 97.865 1.00 40.95 O
TER
Atoms:
C4: (48.624,137.935,98.505)
N3: (47.522,137.106,98.588)
OP1: (47.391,144.365,97.768)
OP2: (45.973,143.780,99.821)
C2: (46.257,137.361,98.118)
C1': (44.764,138.956,97.003)
C3': (43.785,140.517,98.477)
O5': (46.071,142.249,97.865)
O4': (44.847,140.237,96.401)
C5': (44.787,142.496,97.274)
P: (46.845,143.355,98.704)
C4': (44.038,141.191,97.145)
C2': (43.705,139.046,98.101)
O2': (42.465,138.685,97.551)
N1: (46.099,138.594,97.507)
O4: (49.695,137.579,98.999)
O2: (45.350,136.555,98.233)
C6: (47.161,139.456,97.384)
C5: (48.381,139.175,97.847)
O3': (42.584,141.014,99.038)
N3: (47.522,137.106,98.588)
OP1: (47.391,144.365,97.768)
OP2: (45.973,143.780,99.821)
C2: (46.257,137.361,98.118)
C1': (44.764,138.956,97.003)
C3': (43.785,140.517,98.477)
O5': (46.071,142.249,97.865)
O4': (44.847,140.237,96.401)
C5': (44.787,142.496,97.274)
P: (46.845,143.355,98.704)
C4': (44.038,141.191,97.145)
C2': (43.705,139.046,98.101)
O2': (42.465,138.685,97.551)
N1: (46.099,138.594,97.507)
O4: (49.695,137.579,98.999)
O2: (45.350,136.555,98.233)
C6: (47.161,139.456,97.384)
C5: (48.381,139.175,97.847)
O3': (42.584,141.014,99.038)
OP1: (52.378,146.511,99.629)
OP2: (53.564,144.269,99.444)
C3': (49.354,143.092,99.346)
C1': (50.639,141.302,100.198)
C5': (51.214,143.482,97.664)
O4': (50.952,141.406,98.828)
C8: (53.108,141.468,100.768)
O2': (49.215,142.509,101.706)
C6: (53.747,138.845,103.009)
C5: (53.337,139.849,102.121)
C4: (51.996,139.890,101.797)
P: (52.688,145.302,98.858)
C4': (50.228,142.511,98.241)
C2': (50.088,142.661,100.610)
C2: (51.537,138.178,103.093)
N1: (52.802,138.011,103.489)
N3: (51.031,139.073,102.256)
N6: (55.012,138.668,103.396)
N7: (54.029,140.857,101.469)
N9: (51.861,140.919,100.898)
O5': (51.299,144.625,98.517)
O3': (48.066,142.520,99.314)
OP2: (53.564,144.269,99.444)
C3': (49.354,143.092,99.346)
C1': (50.639,141.302,100.198)
C5': (51.214,143.482,97.664)
O4': (50.952,141.406,98.828)
C8: (53.108,141.468,100.768)
O2': (49.215,142.509,101.706)
C6: (53.747,138.845,103.009)
C5: (53.337,139.849,102.121)
C4: (51.996,139.890,101.797)
P: (52.688,145.302,98.858)
C4': (50.228,142.511,98.241)
C2': (50.088,142.661,100.610)
C2: (51.537,138.178,103.093)
N1: (52.802,138.011,103.489)
N3: (51.031,139.073,102.256)
N6: (55.012,138.668,103.396)
N7: (54.029,140.857,101.469)
N9: (51.861,140.919,100.898)
O5': (51.299,144.625,98.517)
O3': (48.066,142.520,99.314)
Image (generated by PyMOL):