ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2DR7:B18:B16

Extra

PDB:
ATOM 1 O3' U A 17 -40.723 33.200 -17.876 1.00 97.62 O
ATOM 2 P U A 18 -41.502 31.996 -17.142 1.00 96.48 P
ATOM 3 OP1 U A 18 -41.544 30.841 -18.080 1.00 97.36 O
ATOM 4 OP2 U A 18 -42.771 32.538 -16.605 1.00 96.07 O
ATOM 5 O5' U A 18 -40.556 31.599 -15.925 1.00 94.83 O
ATOM 6 C5' U A 18 -39.304 30.968 -16.158 1.00 93.56 C
ATOM 7 C4' U A 18 -38.486 30.966 -14.896 1.00 93.01 C
ATOM 8 O4' U A 18 -38.336 32.334 -14.439 1.00 93.91 O
ATOM 9 C3' U A 18 -39.119 30.248 -13.717 1.00 93.22 C
ATOM 10 O3' U A 18 -38.860 28.840 -13.788 1.00 90.92 O
ATOM 11 C2' U A 18 -38.455 30.928 -12.518 1.00 94.31 C
ATOM 12 O2' U A 18 -37.175 30.419 -12.194 1.00 95.56 O
ATOM 13 C1' U A 18 -38.283 32.361 -13.022 1.00 95.14 C
ATOM 14 N1 U A 18 -39.268 33.335 -12.524 1.00 96.34 N
ATOM 15 C2 U A 18 -39.205 33.703 -11.183 1.00 96.04 C
ATOM 16 O2 U A 18 -38.392 33.234 -10.397 1.00 94.49 O
ATOM 17 N3 U A 18 -40.129 34.645 -10.799 1.00 97.06 N
ATOM 18 C4 U A 18 -41.091 35.243 -11.594 1.00 98.23 C
ATOM 19 O4 U A 18 -41.840 36.096 -11.107 1.00 99.49 O
ATOM 20 C5 U A 18 -41.100 34.800 -12.955 1.00 97.43 C
ATOM 21 C6 U A 18 -40.215 33.882 -13.363 1.00 97.33 C
ATOM 22 P C A 19 -38.753 27.981 -12.432 1.00 89.99 P
ATOM 23 OP1 C A 19 -39.770 28.505 -11.479 1.00 91.27 O
ATOM 24 OP2 C A 19 -37.319 27.941 -12.038 1.00 90.60 O
ATOM 25 O5' C A 19 -39.142 26.492 -12.827 1.00 85.07 O
TER

ATOM 1 O3' G B 15 -48.392 37.762 -11.429 1.00 64.60 O
ATOM 2 P A B 16 -48.289 36.988 -12.832 1.00 66.82 P
ATOM 3 OP1 A B 16 -48.176 38.005 -13.905 1.00 67.99 O
ATOM 4 OP2 A B 16 -49.376 35.979 -12.896 1.00 67.67 O
ATOM 5 O5' A B 16 -46.899 36.227 -12.724 1.00 69.33 O
ATOM 6 C5' A B 16 -45.681 36.951 -12.741 1.00 76.39 C
ATOM 7 C4' A B 16 -44.620 36.139 -13.425 1.00 81.46 C
ATOM 8 O4' A B 16 -44.442 34.917 -12.663 1.00 82.45 O
ATOM 9 C3' A B 16 -44.969 35.664 -14.830 1.00 84.70 C
ATOM 10 O3' A B 16 -44.789 36.663 -15.853 1.00 88.61 O
ATOM 11 C2' A B 16 -44.166 34.376 -14.978 1.00 85.53 C
ATOM 12 O2' A B 16 -42.831 34.548 -15.406 1.00 88.95 O
ATOM 13 C1' A B 16 -44.171 33.840 -13.543 1.00 83.59 C
ATOM 14 N9 A B 16 -45.124 32.760 -13.285 1.00 81.22 N
ATOM 15 C8 A B 16 -46.409 32.594 -13.748 1.00 80.74 C
ATOM 16 N7 A B 16 -46.980 31.489 -13.332 1.00 79.69 N
ATOM 17 C5 A B 16 -46.009 30.891 -12.537 1.00 80.29 C
ATOM 18 C6 A B 16 -45.988 29.689 -11.796 1.00 80.50 C
ATOM 19 N6 A B 16 -47.015 28.836 -11.730 1.00 79.71 N
ATOM 20 N1 A B 16 -44.857 29.389 -11.116 1.00 80.55 N
ATOM 21 C2 A B 16 -43.826 30.241 -11.179 1.00 79.12 C
ATOM 22 N3 A B 16 -43.725 31.395 -11.834 1.00 79.02 N
ATOM 23 C4 A B 16 -44.863 31.664 -12.500 1.00 80.13 C
ATOM 24 P U B 17 -43.375 37.439 -16.036 1.00 90.85 P
ATOM 25 OP1 U B 17 -42.942 38.015 -14.738 1.00 91.22 O
ATOM 26 OP2 U B 17 -43.565 38.336 -17.202 1.00 90.50 O
ATOM 27 O5' U B 17 -42.309 36.337 -16.472 1.00 92.35 O
TER

Atoms:
C4: (-41.091,35.243,-11.594)
N3: (-40.129,34.645,-10.799)
OP1: (-41.544,30.841,-18.080)
OP2: (-42.771,32.538,-16.605)
C2: (-39.205,33.703,-11.183)
C1': (-38.283,32.361,-13.022)
C3': (-39.119,30.248,-13.717)
O5': (-40.556,31.599,-15.925)
O4': (-38.336,32.334,-14.439)
C5': (-39.304,30.968,-16.158)
P: (-41.502,31.996,-17.142)
C4': (-38.486,30.966,-14.896)
C2': (-38.455,30.928,-12.518)
O2': (-37.175,30.419,-12.194)
N1: (-39.268,33.335,-12.524)
O4: (-41.840,36.096,-11.107)
O2: (-38.392,33.234,-10.397)
C6: (-40.215,33.882,-13.363)
C5: (-41.100,34.800,-12.955)
O3': (-38.860,28.840,-13.788)
OP1: (-48.176,38.005,-13.905)
OP2: (-49.376,35.979,-12.896)
C3': (-44.969,35.664,-14.830)
C1': (-44.171,33.840,-13.543)
C5': (-45.681,36.951,-12.741)
O4': (-44.442,34.917,-12.663)
C8: (-46.409,32.594,-13.748)
O2': (-42.831,34.548,-15.406)
C6: (-45.988,29.689,-11.796)
C5: (-46.009,30.891,-12.537)
C4: (-44.863,31.664,-12.500)
P: (-48.289,36.988,-12.832)
C4': (-44.620,36.139,-13.425)
C2': (-44.166,34.376,-14.978)
C2: (-43.826,30.241,-11.179)
N1: (-44.857,29.389,-11.116)
N3: (-43.725,31.395,-11.834)
N6: (-47.015,28.836,-11.730)
N7: (-46.980,31.489,-13.332)
N9: (-45.124,32.760,-13.285)
O5': (-46.899,36.227,-12.724)
O3': (-44.789,36.663,-15.853)
Image (generated by PyMOL):
PyMOL image
show in jmol