Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DU3:D58:D56
Extra
PDB:
ATOM 1 O3' A A 57 15.192 61.697 -52.735 1.00117.61 O
ATOM 2 P U A 58 15.117 62.591 -54.074 1.00120.10 P
ATOM 3 OP1 U A 58 15.222 64.013 -53.649 1.00115.51 O
ATOM 4 OP2 U A 58 13.957 62.162 -54.893 1.00121.24 O
ATOM 5 O5' U A 58 16.445 62.204 -54.868 1.00124.40 O
ATOM 6 C5' U A 58 16.551 62.439 -56.268 1.00127.77 C
ATOM 7 C4' U A 58 16.873 61.152 -56.988 1.00127.81 C
ATOM 8 O4' U A 58 16.123 60.082 -56.380 1.00130.04 O
ATOM 9 C3' U A 58 16.502 61.135 -58.466 1.00132.59 C
ATOM 10 O3' U A 58 17.640 61.492 -59.256 1.00134.45 O
ATOM 11 C2' U A 58 16.176 59.662 -58.745 1.00133.69 C
ATOM 12 O2' U A 58 17.289 58.953 -59.255 1.00138.07 O
ATOM 13 C1' U A 58 15.821 59.114 -57.357 1.00131.09 C
ATOM 14 N1 U A 58 14.461 58.610 -57.117 1.00123.63 N
ATOM 15 C2 U A 58 14.077 57.443 -57.756 1.00124.34 C
ATOM 16 O2 U A 58 14.784 56.864 -58.559 1.00120.59 O
ATOM 17 N3 U A 58 12.830 56.978 -57.414 1.00125.00 N
ATOM 18 C4 U A 58 11.943 57.553 -56.527 1.00121.34 C
ATOM 19 O4 U A 58 10.890 56.969 -56.259 1.00115.74 O
ATOM 20 C5 U A 58 12.399 58.777 -55.939 1.00121.41 C
ATOM 21 C6 U A 58 13.610 59.253 -56.250 1.00117.94 C
ATOM 22 P C A 59 18.087 63.031 -59.401 1.00124.42 P
ATOM 23 OP1 C A 59 19.252 63.023 -60.325 1.00122.23 O
ATOM 24 OP2 C A 59 18.226 63.643 -58.053 1.00117.16 O
ATOM 25 O5' C A 59 16.866 63.728 -60.149 1.00131.28 O
TER
ATOM 1 O3' G B 55 4.314 60.798 -54.794 1.00112.49 O
ATOM 2 P A B 56 5.381 61.906 -54.333 1.00107.81 P
ATOM 3 OP1 A B 56 5.357 61.940 -52.848 1.00115.32 O
ATOM 4 OP2 A B 56 5.134 63.157 -55.099 1.00114.25 O
ATOM 5 O5' A B 56 6.784 61.310 -54.795 1.00111.52 O
ATOM 6 C5' A B 56 7.401 60.239 -54.080 1.00108.36 C
ATOM 7 C4' A B 56 8.906 60.406 -54.087 1.00106.37 C
ATOM 8 O4' A B 56 9.339 60.551 -55.463 1.00 93.35 O
ATOM 9 C3' A B 56 9.441 61.642 -53.374 1.00109.55 C
ATOM 10 O3' A B 56 9.576 61.460 -51.951 1.00118.64 O
ATOM 11 C2' A B 56 10.723 61.982 -54.127 1.00107.09 C
ATOM 12 O2' A B 56 11.879 61.347 -53.635 1.00127.85 O
ATOM 13 C1' A B 56 10.416 61.465 -55.535 1.00 97.80 C
ATOM 14 N9 A B 56 10.097 62.487 -56.530 1.00 86.87 N
ATOM 15 C8 A B 56 9.212 63.536 -56.447 1.00 81.35 C
ATOM 16 N7 A B 56 9.164 64.274 -57.533 1.00 85.13 N
ATOM 17 C5 A B 56 10.082 63.672 -58.389 1.00 86.33 C
ATOM 18 C6 A B 56 10.503 63.975 -59.705 1.00 87.26 C
ATOM 19 N6 A B 56 10.039 65.007 -60.413 1.00 90.86 N
ATOM 20 N1 A B 56 11.432 63.167 -60.272 1.00 88.02 N
ATOM 21 C2 A B 56 11.904 62.132 -59.558 1.00 84.96 C
ATOM 22 N3 A B 56 11.592 61.748 -58.318 1.00 74.47 N
ATOM 23 C4 A B 56 10.663 62.570 -57.783 1.00 88.66 C
ATOM 24 P A B 57 10.326 60.156 -51.340 1.00122.67 P
ATOM 25 OP1 A B 57 9.778 58.934 -51.987 1.00123.12 O
ATOM 26 OP2 A B 57 10.267 60.279 -49.859 1.00122.16 O
ATOM 27 O5' A B 57 11.856 60.284 -51.767 1.00126.77 O
TER
ATOM 2 P U A 58 15.117 62.591 -54.074 1.00120.10 P
ATOM 3 OP1 U A 58 15.222 64.013 -53.649 1.00115.51 O
ATOM 4 OP2 U A 58 13.957 62.162 -54.893 1.00121.24 O
ATOM 5 O5' U A 58 16.445 62.204 -54.868 1.00124.40 O
ATOM 6 C5' U A 58 16.551 62.439 -56.268 1.00127.77 C
ATOM 7 C4' U A 58 16.873 61.152 -56.988 1.00127.81 C
ATOM 8 O4' U A 58 16.123 60.082 -56.380 1.00130.04 O
ATOM 9 C3' U A 58 16.502 61.135 -58.466 1.00132.59 C
ATOM 10 O3' U A 58 17.640 61.492 -59.256 1.00134.45 O
ATOM 11 C2' U A 58 16.176 59.662 -58.745 1.00133.69 C
ATOM 12 O2' U A 58 17.289 58.953 -59.255 1.00138.07 O
ATOM 13 C1' U A 58 15.821 59.114 -57.357 1.00131.09 C
ATOM 14 N1 U A 58 14.461 58.610 -57.117 1.00123.63 N
ATOM 15 C2 U A 58 14.077 57.443 -57.756 1.00124.34 C
ATOM 16 O2 U A 58 14.784 56.864 -58.559 1.00120.59 O
ATOM 17 N3 U A 58 12.830 56.978 -57.414 1.00125.00 N
ATOM 18 C4 U A 58 11.943 57.553 -56.527 1.00121.34 C
ATOM 19 O4 U A 58 10.890 56.969 -56.259 1.00115.74 O
ATOM 20 C5 U A 58 12.399 58.777 -55.939 1.00121.41 C
ATOM 21 C6 U A 58 13.610 59.253 -56.250 1.00117.94 C
ATOM 22 P C A 59 18.087 63.031 -59.401 1.00124.42 P
ATOM 23 OP1 C A 59 19.252 63.023 -60.325 1.00122.23 O
ATOM 24 OP2 C A 59 18.226 63.643 -58.053 1.00117.16 O
ATOM 25 O5' C A 59 16.866 63.728 -60.149 1.00131.28 O
TER
ATOM 1 O3' G B 55 4.314 60.798 -54.794 1.00112.49 O
ATOM 2 P A B 56 5.381 61.906 -54.333 1.00107.81 P
ATOM 3 OP1 A B 56 5.357 61.940 -52.848 1.00115.32 O
ATOM 4 OP2 A B 56 5.134 63.157 -55.099 1.00114.25 O
ATOM 5 O5' A B 56 6.784 61.310 -54.795 1.00111.52 O
ATOM 6 C5' A B 56 7.401 60.239 -54.080 1.00108.36 C
ATOM 7 C4' A B 56 8.906 60.406 -54.087 1.00106.37 C
ATOM 8 O4' A B 56 9.339 60.551 -55.463 1.00 93.35 O
ATOM 9 C3' A B 56 9.441 61.642 -53.374 1.00109.55 C
ATOM 10 O3' A B 56 9.576 61.460 -51.951 1.00118.64 O
ATOM 11 C2' A B 56 10.723 61.982 -54.127 1.00107.09 C
ATOM 12 O2' A B 56 11.879 61.347 -53.635 1.00127.85 O
ATOM 13 C1' A B 56 10.416 61.465 -55.535 1.00 97.80 C
ATOM 14 N9 A B 56 10.097 62.487 -56.530 1.00 86.87 N
ATOM 15 C8 A B 56 9.212 63.536 -56.447 1.00 81.35 C
ATOM 16 N7 A B 56 9.164 64.274 -57.533 1.00 85.13 N
ATOM 17 C5 A B 56 10.082 63.672 -58.389 1.00 86.33 C
ATOM 18 C6 A B 56 10.503 63.975 -59.705 1.00 87.26 C
ATOM 19 N6 A B 56 10.039 65.007 -60.413 1.00 90.86 N
ATOM 20 N1 A B 56 11.432 63.167 -60.272 1.00 88.02 N
ATOM 21 C2 A B 56 11.904 62.132 -59.558 1.00 84.96 C
ATOM 22 N3 A B 56 11.592 61.748 -58.318 1.00 74.47 N
ATOM 23 C4 A B 56 10.663 62.570 -57.783 1.00 88.66 C
ATOM 24 P A B 57 10.326 60.156 -51.340 1.00122.67 P
ATOM 25 OP1 A B 57 9.778 58.934 -51.987 1.00123.12 O
ATOM 26 OP2 A B 57 10.267 60.279 -49.859 1.00122.16 O
ATOM 27 O5' A B 57 11.856 60.284 -51.767 1.00126.77 O
TER
Atoms:
C4: (11.943,57.553,-56.527)
N3: (12.830,56.978,-57.414)
OP1: (15.222,64.013,-53.649)
OP2: (13.957,62.162,-54.893)
C2: (14.077,57.443,-57.756)
C1': (15.821,59.114,-57.357)
C3': (16.502,61.135,-58.466)
O5': (16.445,62.204,-54.868)
O4': (16.123,60.082,-56.380)
C5': (16.551,62.439,-56.268)
P: (15.117,62.591,-54.074)
C4': (16.873,61.152,-56.988)
C2': (16.176,59.662,-58.745)
O2': (17.289,58.953,-59.255)
N1: (14.461,58.610,-57.117)
O4: (10.890,56.969,-56.259)
O2: (14.784,56.864,-58.559)
C6: (13.610,59.253,-56.250)
C5: (12.399,58.777,-55.939)
O3': (17.640,61.492,-59.256)
N3: (12.830,56.978,-57.414)
OP1: (15.222,64.013,-53.649)
OP2: (13.957,62.162,-54.893)
C2: (14.077,57.443,-57.756)
C1': (15.821,59.114,-57.357)
C3': (16.502,61.135,-58.466)
O5': (16.445,62.204,-54.868)
O4': (16.123,60.082,-56.380)
C5': (16.551,62.439,-56.268)
P: (15.117,62.591,-54.074)
C4': (16.873,61.152,-56.988)
C2': (16.176,59.662,-58.745)
O2': (17.289,58.953,-59.255)
N1: (14.461,58.610,-57.117)
O4: (10.890,56.969,-56.259)
O2: (14.784,56.864,-58.559)
C6: (13.610,59.253,-56.250)
C5: (12.399,58.777,-55.939)
O3': (17.640,61.492,-59.256)
OP1: (5.357,61.940,-52.848)
OP2: (5.134,63.157,-55.099)
C3': (9.441,61.642,-53.374)
C1': (10.416,61.465,-55.535)
C5': (7.401,60.239,-54.080)
O4': (9.339,60.551,-55.463)
C8: (9.212,63.536,-56.447)
O2': (11.879,61.347,-53.635)
C6: (10.503,63.975,-59.705)
C5: (10.082,63.672,-58.389)
C4: (10.663,62.570,-57.783)
P: (5.381,61.906,-54.333)
C4': (8.906,60.406,-54.087)
C2': (10.723,61.982,-54.127)
C2: (11.904,62.132,-59.558)
N1: (11.432,63.167,-60.272)
N3: (11.592,61.748,-58.318)
N6: (10.039,65.007,-60.413)
N7: (9.164,64.274,-57.533)
N9: (10.097,62.487,-56.530)
O5': (6.784,61.310,-54.795)
O3': (9.576,61.460,-51.951)
OP2: (5.134,63.157,-55.099)
C3': (9.441,61.642,-53.374)
C1': (10.416,61.465,-55.535)
C5': (7.401,60.239,-54.080)
O4': (9.339,60.551,-55.463)
C8: (9.212,63.536,-56.447)
O2': (11.879,61.347,-53.635)
C6: (10.503,63.975,-59.705)
C5: (10.082,63.672,-58.389)
C4: (10.663,62.570,-57.783)
P: (5.381,61.906,-54.333)
C4': (8.906,60.406,-54.087)
C2': (10.723,61.982,-54.127)
C2: (11.904,62.132,-59.558)
N1: (11.432,63.167,-60.272)
N3: (11.592,61.748,-58.318)
N6: (10.039,65.007,-60.413)
N7: (9.164,64.274,-57.533)
N9: (10.097,62.487,-56.530)
O5': (6.784,61.310,-54.795)
O3': (9.576,61.460,-51.951)
Image (generated by PyMOL):