Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DU4:C58:C56
Extra
PDB:
ATOM 1 O3' A A 57 15.111 61.031 -51.846 1.00110.83 O
ATOM 2 P U A 58 15.033 61.901 -53.211 1.00130.75 P
ATOM 3 OP1 U A 58 15.196 63.343 -52.874 1.00113.87 O
ATOM 4 OP2 U A 58 13.868 61.479 -54.021 1.00137.91 O
ATOM 5 O5' U A 58 16.321 61.454 -54.031 1.00133.73 O
ATOM 6 C5' U A 58 16.449 61.789 -55.404 1.00135.64 C
ATOM 7 C4' U A 58 16.745 60.554 -56.212 1.00141.08 C
ATOM 8 O4' U A 58 16.021 59.439 -55.661 1.00142.19 O
ATOM 9 C3' U A 58 16.345 60.667 -57.675 1.00149.39 C
ATOM 10 O3' U A 58 17.508 61.029 -58.439 1.00162.79 O
ATOM 11 C2' U A 58 15.899 59.243 -58.058 1.00152.05 C
ATOM 12 O2' U A 58 16.876 58.512 -58.777 1.00158.21 O
ATOM 13 C1' U A 58 15.650 58.566 -56.699 1.00145.20 C
ATOM 14 N1 U A 58 14.317 58.030 -56.390 1.00142.59 N
ATOM 15 C2 U A 58 13.989 56.771 -56.870 1.00145.61 C
ATOM 16 O2 U A 58 14.724 56.124 -57.594 1.00141.07 O
ATOM 17 N3 U A 58 12.765 56.294 -56.460 1.00144.86 N
ATOM 18 C4 U A 58 11.852 56.936 -55.646 1.00143.11 C
ATOM 19 O4 U A 58 10.831 56.341 -55.284 1.00138.39 O
ATOM 20 C5 U A 58 12.250 58.245 -55.230 1.00145.35 C
ATOM 21 C6 U A 58 13.436 58.736 -55.610 1.00141.81 C
ATOM 22 P C A 59 18.107 62.532 -58.383 1.00157.68 P
ATOM 23 OP1 C A 59 19.324 62.535 -59.240 1.00139.30 O
ATOM 24 OP2 C A 59 18.201 63.039 -56.989 1.00135.35 O
ATOM 25 O5' C A 59 17.007 63.386 -59.147 1.00169.35 O
TER
ATOM 1 O3' G B 55 4.494 60.136 -54.240 1.00133.15 O
ATOM 2 P A B 56 5.674 61.131 -53.785 1.00133.80 P
ATOM 3 OP1 A B 56 5.655 61.166 -52.298 1.00100.69 O
ATOM 4 OP2 A B 56 5.593 62.404 -54.560 1.00101.43 O
ATOM 5 O5' A B 56 6.999 60.386 -54.260 1.00146.98 O
ATOM 6 C5' A B 56 7.570 59.319 -53.502 1.00145.53 C
ATOM 7 C4' A B 56 9.057 59.535 -53.377 1.00139.15 C
ATOM 8 O4' A B 56 9.531 59.887 -54.699 1.00122.37 O
ATOM 9 C3' A B 56 9.456 60.703 -52.476 1.00141.11 C
ATOM 10 O3' A B 56 9.576 60.328 -51.078 1.00141.36 O
ATOM 11 C2' A B 56 10.687 61.312 -53.146 1.00132.39 C
ATOM 12 O2' A B 56 11.914 60.808 -52.681 1.00166.87 O
ATOM 13 C1' A B 56 10.507 60.896 -54.607 1.00123.51 C
ATOM 14 N9 A B 56 10.204 61.934 -55.586 1.00114.36 N
ATOM 15 C8 A B 56 9.332 62.995 -55.530 1.00111.82 C
ATOM 16 N7 A B 56 9.332 63.734 -56.619 1.00112.82 N
ATOM 17 C5 A B 56 10.268 63.115 -57.449 1.00117.44 C
ATOM 18 C6 A B 56 10.745 63.403 -58.770 1.00113.51 C
ATOM 19 N6 A B 56 10.310 64.423 -59.523 1.00107.19 N
ATOM 20 N1 A B 56 11.694 62.581 -59.291 1.00 94.80 N
ATOM 21 C2 A B 56 12.115 61.538 -58.553 1.00 99.43 C
ATOM 22 N3 A B 56 11.739 61.160 -57.326 1.00101.22 N
ATOM 23 C4 A B 56 10.809 62.003 -56.823 1.00120.19 C
ATOM 24 P A B 57 10.640 59.191 -50.591 1.00136.30 P
ATOM 25 OP1 A B 57 10.655 58.096 -51.606 1.00120.05 O
ATOM 26 OP2 A B 57 10.318 58.859 -49.174 1.00112.93 O
ATOM 27 O5' A B 57 12.068 59.913 -50.628 1.00140.54 O
TER
ATOM 2 P U A 58 15.033 61.901 -53.211 1.00130.75 P
ATOM 3 OP1 U A 58 15.196 63.343 -52.874 1.00113.87 O
ATOM 4 OP2 U A 58 13.868 61.479 -54.021 1.00137.91 O
ATOM 5 O5' U A 58 16.321 61.454 -54.031 1.00133.73 O
ATOM 6 C5' U A 58 16.449 61.789 -55.404 1.00135.64 C
ATOM 7 C4' U A 58 16.745 60.554 -56.212 1.00141.08 C
ATOM 8 O4' U A 58 16.021 59.439 -55.661 1.00142.19 O
ATOM 9 C3' U A 58 16.345 60.667 -57.675 1.00149.39 C
ATOM 10 O3' U A 58 17.508 61.029 -58.439 1.00162.79 O
ATOM 11 C2' U A 58 15.899 59.243 -58.058 1.00152.05 C
ATOM 12 O2' U A 58 16.876 58.512 -58.777 1.00158.21 O
ATOM 13 C1' U A 58 15.650 58.566 -56.699 1.00145.20 C
ATOM 14 N1 U A 58 14.317 58.030 -56.390 1.00142.59 N
ATOM 15 C2 U A 58 13.989 56.771 -56.870 1.00145.61 C
ATOM 16 O2 U A 58 14.724 56.124 -57.594 1.00141.07 O
ATOM 17 N3 U A 58 12.765 56.294 -56.460 1.00144.86 N
ATOM 18 C4 U A 58 11.852 56.936 -55.646 1.00143.11 C
ATOM 19 O4 U A 58 10.831 56.341 -55.284 1.00138.39 O
ATOM 20 C5 U A 58 12.250 58.245 -55.230 1.00145.35 C
ATOM 21 C6 U A 58 13.436 58.736 -55.610 1.00141.81 C
ATOM 22 P C A 59 18.107 62.532 -58.383 1.00157.68 P
ATOM 23 OP1 C A 59 19.324 62.535 -59.240 1.00139.30 O
ATOM 24 OP2 C A 59 18.201 63.039 -56.989 1.00135.35 O
ATOM 25 O5' C A 59 17.007 63.386 -59.147 1.00169.35 O
TER
ATOM 1 O3' G B 55 4.494 60.136 -54.240 1.00133.15 O
ATOM 2 P A B 56 5.674 61.131 -53.785 1.00133.80 P
ATOM 3 OP1 A B 56 5.655 61.166 -52.298 1.00100.69 O
ATOM 4 OP2 A B 56 5.593 62.404 -54.560 1.00101.43 O
ATOM 5 O5' A B 56 6.999 60.386 -54.260 1.00146.98 O
ATOM 6 C5' A B 56 7.570 59.319 -53.502 1.00145.53 C
ATOM 7 C4' A B 56 9.057 59.535 -53.377 1.00139.15 C
ATOM 8 O4' A B 56 9.531 59.887 -54.699 1.00122.37 O
ATOM 9 C3' A B 56 9.456 60.703 -52.476 1.00141.11 C
ATOM 10 O3' A B 56 9.576 60.328 -51.078 1.00141.36 O
ATOM 11 C2' A B 56 10.687 61.312 -53.146 1.00132.39 C
ATOM 12 O2' A B 56 11.914 60.808 -52.681 1.00166.87 O
ATOM 13 C1' A B 56 10.507 60.896 -54.607 1.00123.51 C
ATOM 14 N9 A B 56 10.204 61.934 -55.586 1.00114.36 N
ATOM 15 C8 A B 56 9.332 62.995 -55.530 1.00111.82 C
ATOM 16 N7 A B 56 9.332 63.734 -56.619 1.00112.82 N
ATOM 17 C5 A B 56 10.268 63.115 -57.449 1.00117.44 C
ATOM 18 C6 A B 56 10.745 63.403 -58.770 1.00113.51 C
ATOM 19 N6 A B 56 10.310 64.423 -59.523 1.00107.19 N
ATOM 20 N1 A B 56 11.694 62.581 -59.291 1.00 94.80 N
ATOM 21 C2 A B 56 12.115 61.538 -58.553 1.00 99.43 C
ATOM 22 N3 A B 56 11.739 61.160 -57.326 1.00101.22 N
ATOM 23 C4 A B 56 10.809 62.003 -56.823 1.00120.19 C
ATOM 24 P A B 57 10.640 59.191 -50.591 1.00136.30 P
ATOM 25 OP1 A B 57 10.655 58.096 -51.606 1.00120.05 O
ATOM 26 OP2 A B 57 10.318 58.859 -49.174 1.00112.93 O
ATOM 27 O5' A B 57 12.068 59.913 -50.628 1.00140.54 O
TER
Atoms:
C4: (11.852,56.936,-55.646)
N3: (12.765,56.294,-56.460)
OP1: (15.196,63.343,-52.874)
OP2: (13.868,61.479,-54.021)
C2: (13.989,56.771,-56.870)
C1': (15.650,58.566,-56.699)
C3': (16.345,60.667,-57.675)
O5': (16.321,61.454,-54.031)
O4': (16.021,59.439,-55.661)
C5': (16.449,61.789,-55.404)
P: (15.033,61.901,-53.211)
C4': (16.745,60.554,-56.212)
C2': (15.899,59.243,-58.058)
O2': (16.876,58.512,-58.777)
N1: (14.317,58.030,-56.390)
O4: (10.831,56.341,-55.284)
O2: (14.724,56.124,-57.594)
C6: (13.436,58.736,-55.610)
C5: (12.250,58.245,-55.230)
O3': (17.508,61.029,-58.439)
N3: (12.765,56.294,-56.460)
OP1: (15.196,63.343,-52.874)
OP2: (13.868,61.479,-54.021)
C2: (13.989,56.771,-56.870)
C1': (15.650,58.566,-56.699)
C3': (16.345,60.667,-57.675)
O5': (16.321,61.454,-54.031)
O4': (16.021,59.439,-55.661)
C5': (16.449,61.789,-55.404)
P: (15.033,61.901,-53.211)
C4': (16.745,60.554,-56.212)
C2': (15.899,59.243,-58.058)
O2': (16.876,58.512,-58.777)
N1: (14.317,58.030,-56.390)
O4: (10.831,56.341,-55.284)
O2: (14.724,56.124,-57.594)
C6: (13.436,58.736,-55.610)
C5: (12.250,58.245,-55.230)
O3': (17.508,61.029,-58.439)
OP1: (5.655,61.166,-52.298)
OP2: (5.593,62.404,-54.560)
C3': (9.456,60.703,-52.476)
C1': (10.507,60.896,-54.607)
C5': (7.570,59.319,-53.502)
O4': (9.531,59.887,-54.699)
C8: (9.332,62.995,-55.530)
O2': (11.914,60.808,-52.681)
C6: (10.745,63.403,-58.770)
C5: (10.268,63.115,-57.449)
C4: (10.809,62.003,-56.823)
P: (5.674,61.131,-53.785)
C4': (9.057,59.535,-53.377)
C2': (10.687,61.312,-53.146)
C2: (12.115,61.538,-58.553)
N1: (11.694,62.581,-59.291)
N3: (11.739,61.160,-57.326)
N6: (10.310,64.423,-59.523)
N7: (9.332,63.734,-56.619)
N9: (10.204,61.934,-55.586)
O5': (6.999,60.386,-54.260)
O3': (9.576,60.328,-51.078)
OP2: (5.593,62.404,-54.560)
C3': (9.456,60.703,-52.476)
C1': (10.507,60.896,-54.607)
C5': (7.570,59.319,-53.502)
O4': (9.531,59.887,-54.699)
C8: (9.332,62.995,-55.530)
O2': (11.914,60.808,-52.681)
C6: (10.745,63.403,-58.770)
C5: (10.268,63.115,-57.449)
C4: (10.809,62.003,-56.823)
P: (5.674,61.131,-53.785)
C4': (9.057,59.535,-53.377)
C2': (10.687,61.312,-53.146)
C2: (12.115,61.538,-58.553)
N1: (11.694,62.581,-59.291)
N3: (11.739,61.160,-57.326)
N6: (10.310,64.423,-59.523)
N7: (9.332,63.734,-56.619)
N9: (10.204,61.934,-55.586)
O5': (6.999,60.386,-54.260)
O3': (9.576,60.328,-51.078)
Image (generated by PyMOL):