ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3I56:01223:0553

Extra

PDB:
ATOM 1 O3' C A1222 7.649 89.198 98.034 1.00 25.02 O
ATOM 2 P U A1223 7.254 89.389 96.501 1.00 27.51 P
ATOM 3 OP1 U A1223 6.361 88.257 96.165 1.00 28.04 O
ATOM 4 OP2 U A1223 8.496 89.589 95.729 1.00 26.73 O
ATOM 5 O5' U A1223 6.443 90.760 96.486 1.00 23.66 O
ATOM 6 C5' U A1223 5.115 90.814 97.009 1.00 25.01 C
ATOM 7 C4' U A1223 4.565 92.214 96.929 1.00 26.30 C
ATOM 8 O4' U A1223 5.359 93.100 97.750 1.00 27.04 O
ATOM 9 C3' U A1223 4.589 92.879 95.571 1.00 26.99 C
ATOM 10 O3' U A1223 3.516 92.450 94.758 1.00 29.68 O
ATOM 11 C2' U A1223 4.466 94.345 95.943 1.00 26.29 C
ATOM 12 O2' U A1223 3.154 94.703 96.291 1.00 24.50 O
ATOM 13 C1' U A1223 5.343 94.401 97.191 1.00 27.55 C
ATOM 14 N1 U A1223 6.721 94.783 96.859 1.00 31.74 N
ATOM 15 C2 U A1223 7.039 96.126 96.924 1.00 32.56 C
ATOM 16 O2 U A1223 6.234 96.982 97.261 1.00 31.34 O
ATOM 17 N3 U A1223 8.332 96.430 96.574 1.00 33.11 N
ATOM 18 C4 U A1223 9.311 95.551 96.169 1.00 33.08 C
ATOM 19 O4 U A1223 10.404 95.989 95.819 1.00 34.73 O
ATOM 20 C5 U A1223 8.910 94.179 96.141 1.00 33.39 C
ATOM 21 C6 U A1223 7.662 93.847 96.480 1.00 32.43 C
ATOM 22 P G A1224 3.594 92.664 93.171 1.00 31.27 P
ATOM 23 OP1 G A1224 2.660 91.673 92.561 1.00 29.61 O
ATOM 24 OP2 G A1224 5.024 92.679 92.757 1.00 31.22 O
ATOM 25 O5' G A1224 3.008 94.130 92.964 1.00 30.64 O
TER

ATOM 1 O3' G B 552 -5.707 94.818 96.980 1.00 43.52 O
ATOM 2 P A B 553 -5.182 93.884 98.180 1.00 42.63 P
ATOM 3 OP1 A B 553 -5.769 92.536 97.984 1.00 41.15 O
ATOM 4 OP2 A B 553 -5.359 94.589 99.477 1.00 41.58 O
ATOM 5 O5' A B 553 -3.624 93.745 97.893 1.00 42.25 O
ATOM 6 C5' A B 553 -3.156 93.033 96.733 1.00 44.01 C
ATOM 7 C4' A B 553 -1.658 93.158 96.605 1.00 43.11 C
ATOM 8 O4' A B 553 -1.299 94.519 96.256 1.00 42.94 O
ATOM 9 C3' A B 553 -0.874 92.879 97.872 1.00 43.25 C
ATOM 10 O3' A B 553 -0.704 91.478 98.048 1.00 44.69 O
ATOM 11 C2' A B 553 0.438 93.600 97.596 1.00 42.70 C
ATOM 12 O2' A B 553 1.256 92.838 96.730 1.00 42.17 O
ATOM 13 C1' A B 553 -0.049 94.841 96.840 1.00 41.92 C
ATOM 14 N9 A B 553 -0.200 96.078 97.614 1.00 40.88 N
ATOM 15 C8 A B 553 -1.360 96.639 98.093 1.00 41.17 C
ATOM 16 N7 A B 553 -1.182 97.790 98.699 1.00 42.60 N
ATOM 17 C5 A B 553 0.190 97.999 98.626 1.00 42.74 C
ATOM 18 C6 A B 553 1.027 99.057 99.077 1.00 42.21 C
ATOM 19 N6 A B 553 0.588 100.142 99.716 1.00 42.08 N
ATOM 20 N1 A B 553 2.348 98.954 98.841 1.00 40.85 N
ATOM 21 C2 A B 553 2.798 97.869 98.202 1.00 42.27 C
ATOM 22 N3 A B 553 2.122 96.816 97.731 1.00 41.69 N
ATOM 23 C4 A B 553 0.808 96.944 97.975 1.00 41.65 C
ATOM 24 P A B 554 -0.829 90.834 99.519 1.00 46.33 P
ATOM 25 OP1 A B 554 -0.923 89.355 99.344 1.00 43.48 O
ATOM 26 OP2 A B 554 -1.884 91.558 100.277 1.00 45.90 O
ATOM 27 O5' A B 554 0.560 91.180 100.218 1.00 44.71 O
TER

Atoms:
C4: (9.311,95.551,96.169)
N3: (8.332,96.430,96.574)
OP1: (6.361,88.257,96.165)
OP2: (8.496,89.589,95.729)
C2: (7.039,96.126,96.924)
C1': (5.343,94.401,97.191)
C3': (4.589,92.879,95.571)
O5': (6.443,90.760,96.486)
O4': (5.359,93.100,97.750)
C5': (5.115,90.814,97.009)
P: (7.254,89.389,96.501)
C4': (4.565,92.214,96.929)
C2': (4.466,94.345,95.943)
O2': (3.154,94.703,96.291)
N1: (6.721,94.783,96.859)
O4: (10.404,95.989,95.819)
O2: (6.234,96.982,97.261)
C6: (7.662,93.847,96.480)
C5: (8.910,94.179,96.141)
O3': (3.516,92.450,94.758)
OP1: (-5.769,92.536,97.984)
OP2: (-5.359,94.589,99.477)
C3': (-0.874,92.879,97.872)
C1': (-0.049,94.841,96.840)
C5': (-3.156,93.033,96.733)
O4': (-1.299,94.519,96.256)
C8: (-1.360,96.639,98.093)
O2': (1.256,92.838,96.730)
C6: (1.027,99.057,99.077)
C5: (0.190,97.999,98.626)
C4: (0.808,96.944,97.975)
P: (-5.182,93.884,98.180)
C4': (-1.658,93.158,96.605)
C2': (0.438,93.600,97.596)
C2: (2.798,97.869,98.202)
N1: (2.348,98.954,98.841)
N3: (2.122,96.816,97.731)
N6: (0.588,100.142,99.716)
N7: (-1.182,97.790,98.699)
N9: (-0.200,96.078,97.614)
O5': (-3.624,93.745,97.893)
O3': (-0.704,91.478,98.048)
Image (generated by PyMOL):
PyMOL image
show in jmol