Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y39:D54:D33
Extra
PDB:
ATOM 1 O3' C A 53 119.751 84.979 -2.457 1.00 60.05 O
ATOM 2 P U A 54 119.952 86.047 -3.635 1.00 59.80 P
ATOM 3 OP1 U A 54 119.405 87.324 -3.127 1.00 60.12 O
ATOM 4 OP2 U A 54 119.437 85.469 -4.898 1.00 59.21 O
ATOM 5 O5' U A 54 121.529 86.208 -3.747 1.00 59.98 O
ATOM 6 C5' U A 54 122.250 86.854 -2.715 1.00 61.39 C
ATOM 7 C4' U A 54 123.702 86.965 -3.087 1.00 63.37 C
ATOM 8 O4' U A 54 124.271 85.636 -3.174 1.00 64.16 O
ATOM 9 C3' U A 54 124.013 87.575 -4.444 1.00 64.09 C
ATOM 10 O3' U A 54 124.009 88.988 -4.387 1.00 66.27 O
ATOM 11 C2' U A 54 125.415 87.048 -4.693 1.00 64.53 C
ATOM 12 O2' U A 54 126.409 87.714 -3.932 1.00 64.40 O
ATOM 13 C1' U A 54 125.267 85.619 -4.183 1.00 64.29 C
ATOM 14 N1 U A 54 124.822 84.712 -5.243 1.00 64.07 N
ATOM 15 C2 U A 54 125.783 84.195 -6.078 1.00 64.40 C
ATOM 16 O2 U A 54 126.954 84.506 -6.002 1.00 65.46 O
ATOM 17 N3 U A 54 125.325 83.301 -7.008 1.00 65.05 N
ATOM 18 C4 U A 54 124.024 82.891 -7.186 1.00 65.55 C
ATOM 19 O4 U A 54 123.775 82.002 -8.006 1.00 65.70 O
ATOM 20 C5 U A 54 123.080 83.508 -6.299 1.00 65.38 C
ATOM 21 C6 U A 54 123.504 84.378 -5.384 1.00 63.72 C
ATOM 22 P G A 55 123.791 89.840 -5.730 1.00 68.59 P
ATOM 23 OP1 G A 55 123.734 91.251 -5.278 1.00 67.79 O
ATOM 24 OP2 G A 55 122.664 89.260 -6.518 1.00 68.23 O
ATOM 25 O5' G A 55 125.143 89.654 -6.548 1.00 69.79 O
TER
ATOM 1 O3' U B 32 132.113 88.871 2.123 1.00 64.23 O
ATOM 2 P A B 33 131.684 90.412 2.089 1.00 65.64 P
ATOM 3 OP1 A B 33 132.935 91.221 1.969 1.00 65.22 O
ATOM 4 OP2 A B 33 130.761 90.653 3.227 1.00 65.48 O
ATOM 5 O5' A B 33 130.833 90.502 0.743 1.00 64.69 O
ATOM 6 C5' A B 33 129.723 91.383 0.629 1.00 63.92 C
ATOM 7 C4' A B 33 128.664 90.768 -0.253 1.00 63.56 C
ATOM 8 O4' A B 33 129.234 90.463 -1.552 1.00 64.07 O
ATOM 9 C3' A B 33 128.110 89.450 0.245 1.00 62.49 C
ATOM 10 O3' A B 33 127.027 89.696 1.129 1.00 59.90 O
ATOM 11 C2' A B 33 127.660 88.772 -1.043 1.00 62.99 C
ATOM 12 O2' A B 33 126.431 89.265 -1.517 1.00 62.95 O
ATOM 13 C1' A B 33 128.743 89.223 -2.015 1.00 63.79 C
ATOM 14 N9 A B 33 129.888 88.329 -2.158 1.00 64.42 N
ATOM 15 C8 A B 33 131.118 88.455 -1.562 1.00 65.50 C
ATOM 16 N7 A B 33 132.000 87.576 -1.976 1.00 65.26 N
ATOM 17 C5 A B 33 131.295 86.809 -2.886 1.00 64.73 C
ATOM 18 C6 A B 33 131.676 85.743 -3.693 1.00 65.20 C
ATOM 19 N6 A B 33 132.923 85.276 -3.745 1.00 66.09 N
ATOM 20 N1 A B 33 130.730 85.174 -4.471 1.00 65.77 N
ATOM 21 C2 A B 33 129.487 85.680 -4.440 1.00 65.37 C
ATOM 22 N3 A B 33 129.014 86.703 -3.738 1.00 64.48 N
ATOM 23 C4 A B 33 129.981 87.232 -2.975 1.00 64.46 C
ATOM 24 P A B 34 126.726 88.660 2.311 1.00 58.50 P
ATOM 25 OP1 A B 34 125.563 89.151 3.078 1.00 59.65 O
ATOM 26 OP2 A B 34 128.027 88.432 2.999 1.00 58.25 O
ATOM 27 O5' A B 34 126.239 87.345 1.556 1.00 57.94 O
TER
ATOM 2 P U A 54 119.952 86.047 -3.635 1.00 59.80 P
ATOM 3 OP1 U A 54 119.405 87.324 -3.127 1.00 60.12 O
ATOM 4 OP2 U A 54 119.437 85.469 -4.898 1.00 59.21 O
ATOM 5 O5' U A 54 121.529 86.208 -3.747 1.00 59.98 O
ATOM 6 C5' U A 54 122.250 86.854 -2.715 1.00 61.39 C
ATOM 7 C4' U A 54 123.702 86.965 -3.087 1.00 63.37 C
ATOM 8 O4' U A 54 124.271 85.636 -3.174 1.00 64.16 O
ATOM 9 C3' U A 54 124.013 87.575 -4.444 1.00 64.09 C
ATOM 10 O3' U A 54 124.009 88.988 -4.387 1.00 66.27 O
ATOM 11 C2' U A 54 125.415 87.048 -4.693 1.00 64.53 C
ATOM 12 O2' U A 54 126.409 87.714 -3.932 1.00 64.40 O
ATOM 13 C1' U A 54 125.267 85.619 -4.183 1.00 64.29 C
ATOM 14 N1 U A 54 124.822 84.712 -5.243 1.00 64.07 N
ATOM 15 C2 U A 54 125.783 84.195 -6.078 1.00 64.40 C
ATOM 16 O2 U A 54 126.954 84.506 -6.002 1.00 65.46 O
ATOM 17 N3 U A 54 125.325 83.301 -7.008 1.00 65.05 N
ATOM 18 C4 U A 54 124.024 82.891 -7.186 1.00 65.55 C
ATOM 19 O4 U A 54 123.775 82.002 -8.006 1.00 65.70 O
ATOM 20 C5 U A 54 123.080 83.508 -6.299 1.00 65.38 C
ATOM 21 C6 U A 54 123.504 84.378 -5.384 1.00 63.72 C
ATOM 22 P G A 55 123.791 89.840 -5.730 1.00 68.59 P
ATOM 23 OP1 G A 55 123.734 91.251 -5.278 1.00 67.79 O
ATOM 24 OP2 G A 55 122.664 89.260 -6.518 1.00 68.23 O
ATOM 25 O5' G A 55 125.143 89.654 -6.548 1.00 69.79 O
TER
ATOM 1 O3' U B 32 132.113 88.871 2.123 1.00 64.23 O
ATOM 2 P A B 33 131.684 90.412 2.089 1.00 65.64 P
ATOM 3 OP1 A B 33 132.935 91.221 1.969 1.00 65.22 O
ATOM 4 OP2 A B 33 130.761 90.653 3.227 1.00 65.48 O
ATOM 5 O5' A B 33 130.833 90.502 0.743 1.00 64.69 O
ATOM 6 C5' A B 33 129.723 91.383 0.629 1.00 63.92 C
ATOM 7 C4' A B 33 128.664 90.768 -0.253 1.00 63.56 C
ATOM 8 O4' A B 33 129.234 90.463 -1.552 1.00 64.07 O
ATOM 9 C3' A B 33 128.110 89.450 0.245 1.00 62.49 C
ATOM 10 O3' A B 33 127.027 89.696 1.129 1.00 59.90 O
ATOM 11 C2' A B 33 127.660 88.772 -1.043 1.00 62.99 C
ATOM 12 O2' A B 33 126.431 89.265 -1.517 1.00 62.95 O
ATOM 13 C1' A B 33 128.743 89.223 -2.015 1.00 63.79 C
ATOM 14 N9 A B 33 129.888 88.329 -2.158 1.00 64.42 N
ATOM 15 C8 A B 33 131.118 88.455 -1.562 1.00 65.50 C
ATOM 16 N7 A B 33 132.000 87.576 -1.976 1.00 65.26 N
ATOM 17 C5 A B 33 131.295 86.809 -2.886 1.00 64.73 C
ATOM 18 C6 A B 33 131.676 85.743 -3.693 1.00 65.20 C
ATOM 19 N6 A B 33 132.923 85.276 -3.745 1.00 66.09 N
ATOM 20 N1 A B 33 130.730 85.174 -4.471 1.00 65.77 N
ATOM 21 C2 A B 33 129.487 85.680 -4.440 1.00 65.37 C
ATOM 22 N3 A B 33 129.014 86.703 -3.738 1.00 64.48 N
ATOM 23 C4 A B 33 129.981 87.232 -2.975 1.00 64.46 C
ATOM 24 P A B 34 126.726 88.660 2.311 1.00 58.50 P
ATOM 25 OP1 A B 34 125.563 89.151 3.078 1.00 59.65 O
ATOM 26 OP2 A B 34 128.027 88.432 2.999 1.00 58.25 O
ATOM 27 O5' A B 34 126.239 87.345 1.556 1.00 57.94 O
TER
Atoms:
C4: (124.024,82.891,-7.186)
N3: (125.325,83.301,-7.008)
OP1: (119.405,87.324,-3.127)
OP2: (119.437,85.469,-4.898)
C2: (125.783,84.195,-6.078)
C1': (125.267,85.619,-4.183)
C3': (124.013,87.575,-4.444)
O5': (121.529,86.208,-3.747)
O4': (124.271,85.636,-3.174)
C5': (122.250,86.854,-2.715)
P: (119.952,86.047,-3.635)
C4': (123.702,86.965,-3.087)
C2': (125.415,87.048,-4.693)
O2': (126.409,87.714,-3.932)
N1: (124.822,84.712,-5.243)
O4: (123.775,82.002,-8.006)
O2: (126.954,84.506,-6.002)
C6: (123.504,84.378,-5.384)
C5: (123.080,83.508,-6.299)
O3': (124.009,88.988,-4.387)
N3: (125.325,83.301,-7.008)
OP1: (119.405,87.324,-3.127)
OP2: (119.437,85.469,-4.898)
C2: (125.783,84.195,-6.078)
C1': (125.267,85.619,-4.183)
C3': (124.013,87.575,-4.444)
O5': (121.529,86.208,-3.747)
O4': (124.271,85.636,-3.174)
C5': (122.250,86.854,-2.715)
P: (119.952,86.047,-3.635)
C4': (123.702,86.965,-3.087)
C2': (125.415,87.048,-4.693)
O2': (126.409,87.714,-3.932)
N1: (124.822,84.712,-5.243)
O4: (123.775,82.002,-8.006)
O2: (126.954,84.506,-6.002)
C6: (123.504,84.378,-5.384)
C5: (123.080,83.508,-6.299)
O3': (124.009,88.988,-4.387)
OP1: (132.935,91.221,1.969)
OP2: (130.761,90.653,3.227)
C3': (128.110,89.450,0.245)
C1': (128.743,89.223,-2.015)
C5': (129.723,91.383,0.629)
O4': (129.234,90.463,-1.552)
C8: (131.118,88.455,-1.562)
O2': (126.431,89.265,-1.517)
C6: (131.676,85.743,-3.693)
C5: (131.295,86.809,-2.886)
C4: (129.981,87.232,-2.975)
P: (131.684,90.412,2.089)
C4': (128.664,90.768,-0.253)
C2': (127.660,88.772,-1.043)
C2: (129.487,85.680,-4.440)
N1: (130.730,85.174,-4.471)
N3: (129.014,86.703,-3.738)
N6: (132.923,85.276,-3.745)
N7: (132.000,87.576,-1.976)
N9: (129.888,88.329,-2.158)
O5': (130.833,90.502,0.743)
O3': (127.027,89.696,1.129)
OP2: (130.761,90.653,3.227)
C3': (128.110,89.450,0.245)
C1': (128.743,89.223,-2.015)
C5': (129.723,91.383,0.629)
O4': (129.234,90.463,-1.552)
C8: (131.118,88.455,-1.562)
O2': (126.431,89.265,-1.517)
C6: (131.676,85.743,-3.693)
C5: (131.295,86.809,-2.886)
C4: (129.981,87.232,-2.975)
P: (131.684,90.412,2.089)
C4': (128.664,90.768,-0.253)
C2': (127.660,88.772,-1.043)
C2: (129.487,85.680,-4.440)
N1: (130.730,85.174,-4.471)
N3: (129.014,86.703,-3.738)
N6: (132.923,85.276,-3.745)
N7: (132.000,87.576,-1.976)
N9: (129.888,88.329,-2.158)
O5': (130.833,90.502,0.743)
O3': (127.027,89.696,1.129)
Image (generated by PyMOL):