Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:01223:0553
Extra
PDB:
ATOM 1 O3' C A1222 7.723 88.889 97.723 1.00 44.26 O
ATOM 2 P U A1223 7.408 89.065 96.162 1.00 46.77 P
ATOM 3 OP1 U A1223 6.553 87.928 95.722 1.00 45.55 O
ATOM 4 OP2 U A1223 8.695 89.301 95.479 1.00 45.89 O
ATOM 5 O5' U A1223 6.563 90.416 96.123 1.00 42.40 O
ATOM 6 C5' U A1223 5.243 90.451 96.678 1.00 42.49 C
ATOM 7 C4' U A1223 4.679 91.851 96.658 1.00 43.02 C
ATOM 8 O4' U A1223 5.451 92.721 97.525 1.00 42.82 O
ATOM 9 C3' U A1223 4.685 92.583 95.333 1.00 42.61 C
ATOM 10 O3' U A1223 3.637 92.165 94.487 1.00 45.93 O
ATOM 11 C2' U A1223 4.505 94.020 95.783 1.00 43.33 C
ATOM 12 O2' U A1223 3.180 94.306 96.158 1.00 42.89 O
ATOM 13 C1' U A1223 5.397 94.049 97.024 1.00 43.31 C
ATOM 14 N1 U A1223 6.759 94.481 96.676 1.00 45.25 N
ATOM 15 C2 U A1223 7.018 95.839 96.687 1.00 45.69 C
ATOM 16 O2 U A1223 6.180 96.672 96.999 1.00 45.17 O
ATOM 17 N3 U A1223 8.294 96.185 96.318 1.00 45.50 N
ATOM 18 C4 U A1223 9.310 95.333 95.954 1.00 44.35 C
ATOM 19 O4 U A1223 10.397 95.801 95.627 1.00 46.48 O
ATOM 20 C5 U A1223 8.971 93.948 95.982 1.00 43.15 C
ATOM 21 C6 U A1223 7.743 93.576 96.333 1.00 43.60 C
ATOM 22 P G A1224 3.755 92.398 92.903 1.00 48.57 P
ATOM 23 OP1 G A1224 2.854 91.404 92.256 1.00 46.81 O
ATOM 24 OP2 G A1224 5.195 92.437 92.527 1.00 48.97 O
ATOM 25 O5' G A1224 3.149 93.852 92.701 1.00 45.19 O
TER
ATOM 1 O3' G B 552 -5.671 94.611 96.759 1.00 56.93 O
ATOM 2 P A B 553 -5.197 93.639 97.950 1.00 57.48 P
ATOM 3 OP1 A B 553 -5.797 92.304 97.699 1.00 55.71 O
ATOM 4 OP2 A B 553 -5.387 94.298 99.273 1.00 54.08 O
ATOM 5 O5' A B 553 -3.638 93.484 97.671 1.00 56.87 O
ATOM 6 C5' A B 553 -3.178 92.859 96.454 1.00 56.19 C
ATOM 7 C4' A B 553 -1.678 92.959 96.335 1.00 54.96 C
ATOM 8 O4' A B 553 -1.282 94.310 95.988 1.00 54.56 O
ATOM 9 C3' A B 553 -0.893 92.677 97.601 1.00 53.86 C
ATOM 10 O3' A B 553 -0.778 91.289 97.852 1.00 52.40 O
ATOM 11 C2' A B 553 0.444 93.319 97.282 1.00 52.87 C
ATOM 12 O2' A B 553 1.179 92.500 96.393 1.00 52.13 O
ATOM 13 C1' A B 553 -0.005 94.581 96.542 1.00 52.01 C
ATOM 14 N9 A B 553 -0.104 95.792 97.359 1.00 51.64 N
ATOM 15 C8 A B 553 -1.233 96.340 97.910 1.00 51.57 C
ATOM 16 N7 A B 553 -1.021 97.475 98.535 1.00 52.01 N
ATOM 17 C5 A B 553 0.344 97.684 98.400 1.00 51.30 C
ATOM 18 C6 A B 553 1.197 98.728 98.829 1.00 52.04 C
ATOM 19 N6 A B 553 0.783 99.803 99.505 1.00 51.40 N
ATOM 20 N1 A B 553 2.507 98.627 98.533 1.00 51.03 N
ATOM 21 C2 A B 553 2.927 97.554 97.850 1.00 52.28 C
ATOM 22 N3 A B 553 2.229 96.518 97.387 1.00 51.68 N
ATOM 23 C4 A B 553 0.927 96.644 97.695 1.00 52.26 C
ATOM 24 P A B 554 -0.857 90.754 99.365 1.00 53.21 P
ATOM 25 OP1 A B 554 -0.999 89.271 99.298 1.00 51.69 O
ATOM 26 OP2 A B 554 -1.865 91.565 100.095 1.00 52.94 O
ATOM 27 O5' A B 554 0.560 91.115 100.001 1.00 52.90 O
TER
ATOM 2 P U A1223 7.408 89.065 96.162 1.00 46.77 P
ATOM 3 OP1 U A1223 6.553 87.928 95.722 1.00 45.55 O
ATOM 4 OP2 U A1223 8.695 89.301 95.479 1.00 45.89 O
ATOM 5 O5' U A1223 6.563 90.416 96.123 1.00 42.40 O
ATOM 6 C5' U A1223 5.243 90.451 96.678 1.00 42.49 C
ATOM 7 C4' U A1223 4.679 91.851 96.658 1.00 43.02 C
ATOM 8 O4' U A1223 5.451 92.721 97.525 1.00 42.82 O
ATOM 9 C3' U A1223 4.685 92.583 95.333 1.00 42.61 C
ATOM 10 O3' U A1223 3.637 92.165 94.487 1.00 45.93 O
ATOM 11 C2' U A1223 4.505 94.020 95.783 1.00 43.33 C
ATOM 12 O2' U A1223 3.180 94.306 96.158 1.00 42.89 O
ATOM 13 C1' U A1223 5.397 94.049 97.024 1.00 43.31 C
ATOM 14 N1 U A1223 6.759 94.481 96.676 1.00 45.25 N
ATOM 15 C2 U A1223 7.018 95.839 96.687 1.00 45.69 C
ATOM 16 O2 U A1223 6.180 96.672 96.999 1.00 45.17 O
ATOM 17 N3 U A1223 8.294 96.185 96.318 1.00 45.50 N
ATOM 18 C4 U A1223 9.310 95.333 95.954 1.00 44.35 C
ATOM 19 O4 U A1223 10.397 95.801 95.627 1.00 46.48 O
ATOM 20 C5 U A1223 8.971 93.948 95.982 1.00 43.15 C
ATOM 21 C6 U A1223 7.743 93.576 96.333 1.00 43.60 C
ATOM 22 P G A1224 3.755 92.398 92.903 1.00 48.57 P
ATOM 23 OP1 G A1224 2.854 91.404 92.256 1.00 46.81 O
ATOM 24 OP2 G A1224 5.195 92.437 92.527 1.00 48.97 O
ATOM 25 O5' G A1224 3.149 93.852 92.701 1.00 45.19 O
TER
ATOM 1 O3' G B 552 -5.671 94.611 96.759 1.00 56.93 O
ATOM 2 P A B 553 -5.197 93.639 97.950 1.00 57.48 P
ATOM 3 OP1 A B 553 -5.797 92.304 97.699 1.00 55.71 O
ATOM 4 OP2 A B 553 -5.387 94.298 99.273 1.00 54.08 O
ATOM 5 O5' A B 553 -3.638 93.484 97.671 1.00 56.87 O
ATOM 6 C5' A B 553 -3.178 92.859 96.454 1.00 56.19 C
ATOM 7 C4' A B 553 -1.678 92.959 96.335 1.00 54.96 C
ATOM 8 O4' A B 553 -1.282 94.310 95.988 1.00 54.56 O
ATOM 9 C3' A B 553 -0.893 92.677 97.601 1.00 53.86 C
ATOM 10 O3' A B 553 -0.778 91.289 97.852 1.00 52.40 O
ATOM 11 C2' A B 553 0.444 93.319 97.282 1.00 52.87 C
ATOM 12 O2' A B 553 1.179 92.500 96.393 1.00 52.13 O
ATOM 13 C1' A B 553 -0.005 94.581 96.542 1.00 52.01 C
ATOM 14 N9 A B 553 -0.104 95.792 97.359 1.00 51.64 N
ATOM 15 C8 A B 553 -1.233 96.340 97.910 1.00 51.57 C
ATOM 16 N7 A B 553 -1.021 97.475 98.535 1.00 52.01 N
ATOM 17 C5 A B 553 0.344 97.684 98.400 1.00 51.30 C
ATOM 18 C6 A B 553 1.197 98.728 98.829 1.00 52.04 C
ATOM 19 N6 A B 553 0.783 99.803 99.505 1.00 51.40 N
ATOM 20 N1 A B 553 2.507 98.627 98.533 1.00 51.03 N
ATOM 21 C2 A B 553 2.927 97.554 97.850 1.00 52.28 C
ATOM 22 N3 A B 553 2.229 96.518 97.387 1.00 51.68 N
ATOM 23 C4 A B 553 0.927 96.644 97.695 1.00 52.26 C
ATOM 24 P A B 554 -0.857 90.754 99.365 1.00 53.21 P
ATOM 25 OP1 A B 554 -0.999 89.271 99.298 1.00 51.69 O
ATOM 26 OP2 A B 554 -1.865 91.565 100.095 1.00 52.94 O
ATOM 27 O5' A B 554 0.560 91.115 100.001 1.00 52.90 O
TER
Atoms:
C4: (9.310,95.333,95.954)
N3: (8.294,96.185,96.318)
OP1: (6.553,87.928,95.722)
OP2: (8.695,89.301,95.479)
C2: (7.018,95.839,96.687)
C1': (5.397,94.049,97.024)
C3': (4.685,92.583,95.333)
O5': (6.563,90.416,96.123)
O4': (5.451,92.721,97.525)
C5': (5.243,90.451,96.678)
P: (7.408,89.065,96.162)
C4': (4.679,91.851,96.658)
C2': (4.505,94.020,95.783)
O2': (3.180,94.306,96.158)
N1: (6.759,94.481,96.676)
O4: (10.397,95.801,95.627)
O2: (6.180,96.672,96.999)
C6: (7.743,93.576,96.333)
C5: (8.971,93.948,95.982)
O3': (3.637,92.165,94.487)
N3: (8.294,96.185,96.318)
OP1: (6.553,87.928,95.722)
OP2: (8.695,89.301,95.479)
C2: (7.018,95.839,96.687)
C1': (5.397,94.049,97.024)
C3': (4.685,92.583,95.333)
O5': (6.563,90.416,96.123)
O4': (5.451,92.721,97.525)
C5': (5.243,90.451,96.678)
P: (7.408,89.065,96.162)
C4': (4.679,91.851,96.658)
C2': (4.505,94.020,95.783)
O2': (3.180,94.306,96.158)
N1: (6.759,94.481,96.676)
O4: (10.397,95.801,95.627)
O2: (6.180,96.672,96.999)
C6: (7.743,93.576,96.333)
C5: (8.971,93.948,95.982)
O3': (3.637,92.165,94.487)
OP1: (-5.797,92.304,97.699)
OP2: (-5.387,94.298,99.273)
C3': (-0.893,92.677,97.601)
C1': (-0.005,94.581,96.542)
C5': (-3.178,92.859,96.454)
O4': (-1.282,94.310,95.988)
C8: (-1.233,96.340,97.910)
O2': (1.179,92.500,96.393)
C6: (1.197,98.728,98.829)
C5: (0.344,97.684,98.400)
C4: (0.927,96.644,97.695)
P: (-5.197,93.639,97.950)
C4': (-1.678,92.959,96.335)
C2': (0.444,93.319,97.282)
C2: (2.927,97.554,97.850)
N1: (2.507,98.627,98.533)
N3: (2.229,96.518,97.387)
N6: (0.783,99.803,99.505)
N7: (-1.021,97.475,98.535)
N9: (-0.104,95.792,97.359)
O5': (-3.638,93.484,97.671)
O3': (-0.778,91.289,97.852)
OP2: (-5.387,94.298,99.273)
C3': (-0.893,92.677,97.601)
C1': (-0.005,94.581,96.542)
C5': (-3.178,92.859,96.454)
O4': (-1.282,94.310,95.988)
C8: (-1.233,96.340,97.910)
O2': (1.179,92.500,96.393)
C6: (1.197,98.728,98.829)
C5: (0.344,97.684,98.400)
C4: (0.927,96.644,97.695)
P: (-5.197,93.639,97.950)
C4': (-1.678,92.959,96.335)
C2': (0.444,93.319,97.282)
C2: (2.927,97.554,97.850)
N1: (2.507,98.627,98.533)
N3: (2.229,96.518,97.387)
N6: (0.783,99.803,99.505)
N7: (-1.021,97.475,98.535)
N9: (-0.104,95.792,97.359)
O5': (-3.638,93.484,97.671)
O3': (-0.778,91.289,97.852)
Image (generated by PyMOL):