Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIL:A39:A38
Extra
PDB:
ATOM 1 O3' A A 38 -7.453 63.738 -2.371 1.00 42.00 O
ATOM 2 P U A 39 -7.470 63.172 -3.871 1.00 41.13 P
ATOM 3 OP1 U A 39 -6.131 63.369 -4.476 1.00 41.27 O
ATOM 4 OP2 U A 39 -8.665 63.734 -4.537 1.00 41.13 O
ATOM 5 O5' U A 39 -7.726 61.606 -3.659 1.00 39.92 O
ATOM 6 C5' U A 39 -6.697 60.750 -3.160 1.00 38.10 C
ATOM 7 C4' U A 39 -7.215 59.803 -2.085 1.00 36.75 C
ATOM 8 O4' U A 39 -7.600 60.553 -0.902 1.00 36.40 O
ATOM 9 C3' U A 39 -8.428 58.948 -2.464 1.00 35.90 C
ATOM 10 O3' U A 39 -8.255 57.600 -2.008 1.00 34.58 O
ATOM 11 C2' U A 39 -9.578 59.643 -1.733 1.00 36.04 C
ATOM 12 O2' U A 39 -10.653 58.774 -1.435 1.00 36.08 O
ATOM 13 C1' U A 39 -8.860 60.086 -0.461 1.00 36.08 C
ATOM 14 N1 U A 39 -9.565 61.144 0.343 1.00 35.95 N
ATOM 15 C2 U A 39 -10.441 60.759 1.349 1.00 35.84 C
ATOM 16 O2 U A 39 -10.684 59.598 1.632 1.00 35.69 O
ATOM 17 N3 U A 39 -11.033 61.797 2.031 1.00 35.79 N
ATOM 18 C4 U A 39 -10.847 63.153 1.815 1.00 35.88 C
ATOM 19 O4 U A 39 -11.450 63.966 2.508 1.00 35.92 O
ATOM 20 C5 U A 39 -9.923 63.478 0.754 1.00 35.89 C
ATOM 21 C6 U A 39 -9.331 62.485 0.075 1.00 35.95 C
ATOM 22 P C A 40 -7.423 56.495 -2.824 1.00 33.41 P
ATOM 23 OP1 C A 40 -6.965 57.086 -4.104 1.00 33.38 O
ATOM 24 OP2 C A 40 -8.234 55.258 -2.840 1.00 33.49 O
ATOM 25 O5' C A 40 -6.138 56.253 -1.903 1.00 31.92 O
TER
ATOM 1 O3' C B 37 -1.398 65.352 -0.575 1.00 44.94 O
ATOM 2 P A B 38 -2.053 66.064 -1.854 1.00 44.92 P
ATOM 3 OP1 A B 38 -1.479 65.417 -3.057 1.00 44.93 O
ATOM 4 OP2 A B 38 -1.932 67.531 -1.687 1.00 44.90 O
ATOM 5 O5' A B 38 -3.601 65.663 -1.758 1.00 44.56 O
ATOM 6 C5' A B 38 -4.014 64.297 -1.821 1.00 44.05 C
ATOM 7 C4' A B 38 -5.388 64.116 -1.199 1.00 43.52 C
ATOM 8 O4' A B 38 -5.413 64.708 0.124 1.00 43.58 O
ATOM 9 C3' A B 38 -6.527 64.754 -1.988 1.00 43.07 C
ATOM 10 O3' A B 38 -7.453 63.738 -2.371 1.00 42.00 O
ATOM 11 C2' A B 38 -7.135 65.792 -1.041 1.00 43.35 C
ATOM 12 O2' A B 38 -8.549 65.837 -1.098 1.00 43.40 O
ATOM 13 C1' A B 38 -6.667 65.321 0.334 1.00 43.68 C
ATOM 14 N9 A B 38 -6.492 66.401 1.308 1.00 43.91 N
ATOM 15 C8 A B 38 -5.612 67.447 1.228 1.00 44.01 C
ATOM 16 N7 A B 38 -5.666 68.273 2.245 1.00 44.05 N
ATOM 17 C5 A B 38 -6.651 67.734 3.056 1.00 44.07 C
ATOM 18 C6 A B 38 -7.190 68.139 4.299 1.00 44.06 C
ATOM 19 N6 A B 38 -6.782 69.232 4.953 1.00 43.96 N
ATOM 20 N1 A B 38 -8.166 67.378 4.846 1.00 44.03 N
ATOM 21 C2 A B 38 -8.574 66.282 4.188 1.00 44.04 C
ATOM 22 N3 A B 38 -8.143 65.802 3.018 1.00 44.01 N
ATOM 23 C4 A B 38 -7.172 66.577 2.496 1.00 44.01 C
ATOM 24 P U B 39 -7.470 63.172 -3.871 1.00 41.13 P
ATOM 25 OP1 U B 39 -6.131 63.369 -4.476 1.00 41.27 O
ATOM 26 OP2 U B 39 -8.665 63.734 -4.537 1.00 41.13 O
ATOM 27 O5' U B 39 -7.726 61.606 -3.659 1.00 39.92 O
TER
ATOM 2 P U A 39 -7.470 63.172 -3.871 1.00 41.13 P
ATOM 3 OP1 U A 39 -6.131 63.369 -4.476 1.00 41.27 O
ATOM 4 OP2 U A 39 -8.665 63.734 -4.537 1.00 41.13 O
ATOM 5 O5' U A 39 -7.726 61.606 -3.659 1.00 39.92 O
ATOM 6 C5' U A 39 -6.697 60.750 -3.160 1.00 38.10 C
ATOM 7 C4' U A 39 -7.215 59.803 -2.085 1.00 36.75 C
ATOM 8 O4' U A 39 -7.600 60.553 -0.902 1.00 36.40 O
ATOM 9 C3' U A 39 -8.428 58.948 -2.464 1.00 35.90 C
ATOM 10 O3' U A 39 -8.255 57.600 -2.008 1.00 34.58 O
ATOM 11 C2' U A 39 -9.578 59.643 -1.733 1.00 36.04 C
ATOM 12 O2' U A 39 -10.653 58.774 -1.435 1.00 36.08 O
ATOM 13 C1' U A 39 -8.860 60.086 -0.461 1.00 36.08 C
ATOM 14 N1 U A 39 -9.565 61.144 0.343 1.00 35.95 N
ATOM 15 C2 U A 39 -10.441 60.759 1.349 1.00 35.84 C
ATOM 16 O2 U A 39 -10.684 59.598 1.632 1.00 35.69 O
ATOM 17 N3 U A 39 -11.033 61.797 2.031 1.00 35.79 N
ATOM 18 C4 U A 39 -10.847 63.153 1.815 1.00 35.88 C
ATOM 19 O4 U A 39 -11.450 63.966 2.508 1.00 35.92 O
ATOM 20 C5 U A 39 -9.923 63.478 0.754 1.00 35.89 C
ATOM 21 C6 U A 39 -9.331 62.485 0.075 1.00 35.95 C
ATOM 22 P C A 40 -7.423 56.495 -2.824 1.00 33.41 P
ATOM 23 OP1 C A 40 -6.965 57.086 -4.104 1.00 33.38 O
ATOM 24 OP2 C A 40 -8.234 55.258 -2.840 1.00 33.49 O
ATOM 25 O5' C A 40 -6.138 56.253 -1.903 1.00 31.92 O
TER
ATOM 1 O3' C B 37 -1.398 65.352 -0.575 1.00 44.94 O
ATOM 2 P A B 38 -2.053 66.064 -1.854 1.00 44.92 P
ATOM 3 OP1 A B 38 -1.479 65.417 -3.057 1.00 44.93 O
ATOM 4 OP2 A B 38 -1.932 67.531 -1.687 1.00 44.90 O
ATOM 5 O5' A B 38 -3.601 65.663 -1.758 1.00 44.56 O
ATOM 6 C5' A B 38 -4.014 64.297 -1.821 1.00 44.05 C
ATOM 7 C4' A B 38 -5.388 64.116 -1.199 1.00 43.52 C
ATOM 8 O4' A B 38 -5.413 64.708 0.124 1.00 43.58 O
ATOM 9 C3' A B 38 -6.527 64.754 -1.988 1.00 43.07 C
ATOM 10 O3' A B 38 -7.453 63.738 -2.371 1.00 42.00 O
ATOM 11 C2' A B 38 -7.135 65.792 -1.041 1.00 43.35 C
ATOM 12 O2' A B 38 -8.549 65.837 -1.098 1.00 43.40 O
ATOM 13 C1' A B 38 -6.667 65.321 0.334 1.00 43.68 C
ATOM 14 N9 A B 38 -6.492 66.401 1.308 1.00 43.91 N
ATOM 15 C8 A B 38 -5.612 67.447 1.228 1.00 44.01 C
ATOM 16 N7 A B 38 -5.666 68.273 2.245 1.00 44.05 N
ATOM 17 C5 A B 38 -6.651 67.734 3.056 1.00 44.07 C
ATOM 18 C6 A B 38 -7.190 68.139 4.299 1.00 44.06 C
ATOM 19 N6 A B 38 -6.782 69.232 4.953 1.00 43.96 N
ATOM 20 N1 A B 38 -8.166 67.378 4.846 1.00 44.03 N
ATOM 21 C2 A B 38 -8.574 66.282 4.188 1.00 44.04 C
ATOM 22 N3 A B 38 -8.143 65.802 3.018 1.00 44.01 N
ATOM 23 C4 A B 38 -7.172 66.577 2.496 1.00 44.01 C
ATOM 24 P U B 39 -7.470 63.172 -3.871 1.00 41.13 P
ATOM 25 OP1 U B 39 -6.131 63.369 -4.476 1.00 41.27 O
ATOM 26 OP2 U B 39 -8.665 63.734 -4.537 1.00 41.13 O
ATOM 27 O5' U B 39 -7.726 61.606 -3.659 1.00 39.92 O
TER
Atoms:
C4: (-10.847,63.153,1.815)
N3: (-11.033,61.797,2.031)
OP1: (-6.131,63.369,-4.476)
OP2: (-8.665,63.734,-4.537)
C2: (-10.441,60.759,1.349)
C1': (-8.860,60.086,-0.461)
C3': (-8.428,58.948,-2.464)
O5': (-7.726,61.606,-3.659)
O4': (-7.600,60.553,-0.902)
C5': (-6.697,60.750,-3.160)
P: (-7.470,63.172,-3.871)
C4': (-7.215,59.803,-2.085)
C2': (-9.578,59.643,-1.733)
O2': (-10.653,58.774,-1.435)
N1: (-9.565,61.144,0.343)
O4: (-11.450,63.966,2.508)
O2: (-10.684,59.598,1.632)
C6: (-9.331,62.485,0.075)
C5: (-9.923,63.478,0.754)
O3': (-8.255,57.600,-2.008)
N3: (-11.033,61.797,2.031)
OP1: (-6.131,63.369,-4.476)
OP2: (-8.665,63.734,-4.537)
C2: (-10.441,60.759,1.349)
C1': (-8.860,60.086,-0.461)
C3': (-8.428,58.948,-2.464)
O5': (-7.726,61.606,-3.659)
O4': (-7.600,60.553,-0.902)
C5': (-6.697,60.750,-3.160)
P: (-7.470,63.172,-3.871)
C4': (-7.215,59.803,-2.085)
C2': (-9.578,59.643,-1.733)
O2': (-10.653,58.774,-1.435)
N1: (-9.565,61.144,0.343)
O4: (-11.450,63.966,2.508)
O2: (-10.684,59.598,1.632)
C6: (-9.331,62.485,0.075)
C5: (-9.923,63.478,0.754)
O3': (-8.255,57.600,-2.008)
OP1: (-1.479,65.417,-3.057)
OP2: (-1.932,67.531,-1.687)
C3': (-6.527,64.754,-1.988)
C1': (-6.667,65.321,0.334)
C5': (-4.014,64.297,-1.821)
O4': (-5.413,64.708,0.124)
C8: (-5.612,67.447,1.228)
O2': (-8.549,65.837,-1.098)
C6: (-7.190,68.139,4.299)
C5: (-6.651,67.734,3.056)
C4: (-7.172,66.577,2.496)
P: (-2.053,66.064,-1.854)
C4': (-5.388,64.116,-1.199)
C2': (-7.135,65.792,-1.041)
C2: (-8.574,66.282,4.188)
N1: (-8.166,67.378,4.846)
N3: (-8.143,65.802,3.018)
N6: (-6.782,69.232,4.953)
N7: (-5.666,68.273,2.245)
N9: (-6.492,66.401,1.308)
O5': (-3.601,65.663,-1.758)
O3': (-7.453,63.738,-2.371)
OP2: (-1.932,67.531,-1.687)
C3': (-6.527,64.754,-1.988)
C1': (-6.667,65.321,0.334)
C5': (-4.014,64.297,-1.821)
O4': (-5.413,64.708,0.124)
C8: (-5.612,67.447,1.228)
O2': (-8.549,65.837,-1.098)
C6: (-7.190,68.139,4.299)
C5: (-6.651,67.734,3.056)
C4: (-7.172,66.577,2.496)
P: (-2.053,66.064,-1.854)
C4': (-5.388,64.116,-1.199)
C2': (-7.135,65.792,-1.041)
C2: (-8.574,66.282,4.188)
N1: (-8.166,67.378,4.846)
N3: (-8.143,65.802,3.018)
N6: (-6.782,69.232,4.953)
N7: (-5.666,68.273,2.245)
N9: (-6.492,66.401,1.308)
O5': (-3.601,65.663,-1.758)
O3': (-7.453,63.738,-2.371)
Image (generated by PyMOL):