Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIO:X39:X38
Extra
PDB:
ATOM 1 O3' A A 38 -8.153 62.961 -2.123 1.00 76.37 O
ATOM 2 P U A 39 -8.136 62.483 -3.655 1.00 74.61 P
ATOM 3 OP1 U A 39 -6.819 62.820 -4.249 1.00 74.70 O
ATOM 4 OP2 U A 39 -9.379 62.990 -4.280 1.00 74.72 O
ATOM 5 O5' U A 39 -8.280 60.891 -3.560 1.00 72.19 O
ATOM 6 C5' U A 39 -7.234 60.064 -3.046 1.00 68.22 C
ATOM 7 C4' U A 39 -7.765 59.091 -2.002 1.00 65.14 C
ATOM 8 O4' U A 39 -8.220 59.831 -0.837 1.00 64.38 O
ATOM 9 C3' U A 39 -8.941 58.200 -2.422 1.00 63.24 C
ATOM 10 O3' U A 39 -8.767 56.868 -1.924 1.00 60.64 O
ATOM 11 C2' U A 39 -10.131 58.867 -1.733 1.00 63.32 C
ATOM 12 O2' U A 39 -11.199 57.967 -1.504 1.00 63.11 O
ATOM 13 C1' U A 39 -9.458 59.282 -0.426 1.00 63.62 C
ATOM 14 N1 U A 39 -10.214 60.250 0.454 1.00 63.34 N
ATOM 15 C2 U A 39 -11.115 59.758 1.389 1.00 63.16 C
ATOM 16 O2 U A 39 -11.355 58.573 1.557 1.00 62.76 O
ATOM 17 N3 U A 39 -11.746 60.718 2.144 1.00 63.22 N
ATOM 18 C4 U A 39 -11.578 62.089 2.070 1.00 63.30 C
ATOM 19 O4 U A 39 -12.220 62.817 2.820 1.00 63.35 O
ATOM 20 C5 U A 39 -10.625 62.528 1.079 1.00 63.32 C
ATOM 21 C6 U A 39 -9.993 61.614 0.328 1.00 63.42 C
ATOM 22 P C A 40 -7.986 55.706 -2.709 1.00 58.35 P
ATOM 23 OP1 C A 40 -7.357 56.271 -3.925 1.00 58.38 O
ATOM 24 OP2 C A 40 -8.922 54.568 -2.822 1.00 58.07 O
ATOM 25 O5' C A 40 -6.804 55.307 -1.701 1.00 56.19 O
TER
ATOM 1 O3' C B 37 -2.187 64.997 -0.187 1.00 87.22 O
ATOM 2 P A B 38 -3.024 65.852 -1.254 1.00 86.05 P
ATOM 3 OP1 A B 38 -2.460 65.555 -2.591 1.00 86.14 O
ATOM 4 OP2 A B 38 -3.090 67.254 -0.779 1.00 86.11 O
ATOM 5 O5' A B 38 -4.495 65.225 -1.173 1.00 84.33 O
ATOM 6 C5' A B 38 -4.736 63.860 -1.517 1.00 81.83 C
ATOM 7 C4' A B 38 -6.082 63.412 -0.973 1.00 79.85 C
ATOM 8 O4' A B 38 -6.194 63.786 0.423 1.00 79.43 O
ATOM 9 C3' A B 38 -7.288 64.017 -1.689 1.00 78.56 C
ATOM 10 O3' A B 38 -8.153 62.961 -2.123 1.00 76.37 O
ATOM 11 C2' A B 38 -7.924 64.956 -0.658 1.00 78.72 C
ATOM 12 O2' A B 38 -9.338 64.987 -0.724 1.00 78.74 O
ATOM 13 C1' A B 38 -7.459 64.363 0.669 1.00 78.92 C
ATOM 14 N9 A B 38 -7.317 65.333 1.757 1.00 78.86 N
ATOM 15 C8 A B 38 -6.324 66.264 1.909 1.00 78.80 C
ATOM 16 N7 A B 38 -6.444 67.005 2.986 1.00 78.76 N
ATOM 17 C5 A B 38 -7.596 66.527 3.589 1.00 78.77 C
ATOM 18 C6 A B 38 -8.276 66.892 4.775 1.00 78.77 C
ATOM 19 N6 A B 38 -7.858 67.868 5.587 1.00 78.74 N
ATOM 20 N1 A B 38 -9.404 66.214 5.097 1.00 78.71 N
ATOM 21 C2 A B 38 -9.824 65.234 4.282 1.00 78.64 C
ATOM 22 N3 A B 38 -9.270 64.804 3.144 1.00 78.60 N
ATOM 23 C4 A B 38 -8.149 65.494 2.847 1.00 78.77 C
ATOM 24 P U B 39 -8.136 62.483 -3.655 1.00 74.61 P
ATOM 25 OP1 U B 39 -6.819 62.820 -4.249 1.00 74.70 O
ATOM 26 OP2 U B 39 -9.379 62.990 -4.280 1.00 74.72 O
ATOM 27 O5' U B 39 -8.280 60.891 -3.560 1.00 72.19 O
TER
ATOM 2 P U A 39 -8.136 62.483 -3.655 1.00 74.61 P
ATOM 3 OP1 U A 39 -6.819 62.820 -4.249 1.00 74.70 O
ATOM 4 OP2 U A 39 -9.379 62.990 -4.280 1.00 74.72 O
ATOM 5 O5' U A 39 -8.280 60.891 -3.560 1.00 72.19 O
ATOM 6 C5' U A 39 -7.234 60.064 -3.046 1.00 68.22 C
ATOM 7 C4' U A 39 -7.765 59.091 -2.002 1.00 65.14 C
ATOM 8 O4' U A 39 -8.220 59.831 -0.837 1.00 64.38 O
ATOM 9 C3' U A 39 -8.941 58.200 -2.422 1.00 63.24 C
ATOM 10 O3' U A 39 -8.767 56.868 -1.924 1.00 60.64 O
ATOM 11 C2' U A 39 -10.131 58.867 -1.733 1.00 63.32 C
ATOM 12 O2' U A 39 -11.199 57.967 -1.504 1.00 63.11 O
ATOM 13 C1' U A 39 -9.458 59.282 -0.426 1.00 63.62 C
ATOM 14 N1 U A 39 -10.214 60.250 0.454 1.00 63.34 N
ATOM 15 C2 U A 39 -11.115 59.758 1.389 1.00 63.16 C
ATOM 16 O2 U A 39 -11.355 58.573 1.557 1.00 62.76 O
ATOM 17 N3 U A 39 -11.746 60.718 2.144 1.00 63.22 N
ATOM 18 C4 U A 39 -11.578 62.089 2.070 1.00 63.30 C
ATOM 19 O4 U A 39 -12.220 62.817 2.820 1.00 63.35 O
ATOM 20 C5 U A 39 -10.625 62.528 1.079 1.00 63.32 C
ATOM 21 C6 U A 39 -9.993 61.614 0.328 1.00 63.42 C
ATOM 22 P C A 40 -7.986 55.706 -2.709 1.00 58.35 P
ATOM 23 OP1 C A 40 -7.357 56.271 -3.925 1.00 58.38 O
ATOM 24 OP2 C A 40 -8.922 54.568 -2.822 1.00 58.07 O
ATOM 25 O5' C A 40 -6.804 55.307 -1.701 1.00 56.19 O
TER
ATOM 1 O3' C B 37 -2.187 64.997 -0.187 1.00 87.22 O
ATOM 2 P A B 38 -3.024 65.852 -1.254 1.00 86.05 P
ATOM 3 OP1 A B 38 -2.460 65.555 -2.591 1.00 86.14 O
ATOM 4 OP2 A B 38 -3.090 67.254 -0.779 1.00 86.11 O
ATOM 5 O5' A B 38 -4.495 65.225 -1.173 1.00 84.33 O
ATOM 6 C5' A B 38 -4.736 63.860 -1.517 1.00 81.83 C
ATOM 7 C4' A B 38 -6.082 63.412 -0.973 1.00 79.85 C
ATOM 8 O4' A B 38 -6.194 63.786 0.423 1.00 79.43 O
ATOM 9 C3' A B 38 -7.288 64.017 -1.689 1.00 78.56 C
ATOM 10 O3' A B 38 -8.153 62.961 -2.123 1.00 76.37 O
ATOM 11 C2' A B 38 -7.924 64.956 -0.658 1.00 78.72 C
ATOM 12 O2' A B 38 -9.338 64.987 -0.724 1.00 78.74 O
ATOM 13 C1' A B 38 -7.459 64.363 0.669 1.00 78.92 C
ATOM 14 N9 A B 38 -7.317 65.333 1.757 1.00 78.86 N
ATOM 15 C8 A B 38 -6.324 66.264 1.909 1.00 78.80 C
ATOM 16 N7 A B 38 -6.444 67.005 2.986 1.00 78.76 N
ATOM 17 C5 A B 38 -7.596 66.527 3.589 1.00 78.77 C
ATOM 18 C6 A B 38 -8.276 66.892 4.775 1.00 78.77 C
ATOM 19 N6 A B 38 -7.858 67.868 5.587 1.00 78.74 N
ATOM 20 N1 A B 38 -9.404 66.214 5.097 1.00 78.71 N
ATOM 21 C2 A B 38 -9.824 65.234 4.282 1.00 78.64 C
ATOM 22 N3 A B 38 -9.270 64.804 3.144 1.00 78.60 N
ATOM 23 C4 A B 38 -8.149 65.494 2.847 1.00 78.77 C
ATOM 24 P U B 39 -8.136 62.483 -3.655 1.00 74.61 P
ATOM 25 OP1 U B 39 -6.819 62.820 -4.249 1.00 74.70 O
ATOM 26 OP2 U B 39 -9.379 62.990 -4.280 1.00 74.72 O
ATOM 27 O5' U B 39 -8.280 60.891 -3.560 1.00 72.19 O
TER
Atoms:
C4: (-11.578,62.089,2.070)
N3: (-11.746,60.718,2.144)
OP1: (-6.819,62.820,-4.249)
OP2: (-9.379,62.990,-4.280)
C2: (-11.115,59.758,1.389)
C1': (-9.458,59.282,-0.426)
C3': (-8.941,58.200,-2.422)
O5': (-8.280,60.891,-3.560)
O4': (-8.220,59.831,-0.837)
C5': (-7.234,60.064,-3.046)
P: (-8.136,62.483,-3.655)
C4': (-7.765,59.091,-2.002)
C2': (-10.131,58.867,-1.733)
O2': (-11.199,57.967,-1.504)
N1: (-10.214,60.250,0.454)
O4: (-12.220,62.817,2.820)
O2: (-11.355,58.573,1.557)
C6: (-9.993,61.614,0.328)
C5: (-10.625,62.528,1.079)
O3': (-8.767,56.868,-1.924)
N3: (-11.746,60.718,2.144)
OP1: (-6.819,62.820,-4.249)
OP2: (-9.379,62.990,-4.280)
C2: (-11.115,59.758,1.389)
C1': (-9.458,59.282,-0.426)
C3': (-8.941,58.200,-2.422)
O5': (-8.280,60.891,-3.560)
O4': (-8.220,59.831,-0.837)
C5': (-7.234,60.064,-3.046)
P: (-8.136,62.483,-3.655)
C4': (-7.765,59.091,-2.002)
C2': (-10.131,58.867,-1.733)
O2': (-11.199,57.967,-1.504)
N1: (-10.214,60.250,0.454)
O4: (-12.220,62.817,2.820)
O2: (-11.355,58.573,1.557)
C6: (-9.993,61.614,0.328)
C5: (-10.625,62.528,1.079)
O3': (-8.767,56.868,-1.924)
OP1: (-2.460,65.555,-2.591)
OP2: (-3.090,67.254,-0.779)
C3': (-7.288,64.017,-1.689)
C1': (-7.459,64.363,0.669)
C5': (-4.736,63.860,-1.517)
O4': (-6.194,63.786,0.423)
C8: (-6.324,66.264,1.909)
O2': (-9.338,64.987,-0.724)
C6: (-8.276,66.892,4.775)
C5: (-7.596,66.527,3.589)
C4: (-8.149,65.494,2.847)
P: (-3.024,65.852,-1.254)
C4': (-6.082,63.412,-0.973)
C2': (-7.924,64.956,-0.658)
C2: (-9.824,65.234,4.282)
N1: (-9.404,66.214,5.097)
N3: (-9.270,64.804,3.144)
N6: (-7.858,67.868,5.587)
N7: (-6.444,67.005,2.986)
N9: (-7.317,65.333,1.757)
O5': (-4.495,65.225,-1.173)
O3': (-8.153,62.961,-2.123)
OP2: (-3.090,67.254,-0.779)
C3': (-7.288,64.017,-1.689)
C1': (-7.459,64.363,0.669)
C5': (-4.736,63.860,-1.517)
O4': (-6.194,63.786,0.423)
C8: (-6.324,66.264,1.909)
O2': (-9.338,64.987,-0.724)
C6: (-8.276,66.892,4.775)
C5: (-7.596,66.527,3.589)
C4: (-8.149,65.494,2.847)
P: (-3.024,65.852,-1.254)
C4': (-6.082,63.412,-0.973)
C2': (-7.924,64.956,-0.658)
C2: (-9.824,65.234,4.282)
N1: (-9.404,66.214,5.097)
N3: (-9.270,64.804,3.144)
N6: (-7.858,67.868,5.587)
N7: (-6.444,67.005,2.986)
N9: (-7.317,65.333,1.757)
O5': (-4.495,65.225,-1.173)
O3': (-8.153,62.961,-2.123)
Image (generated by PyMOL):