Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIQ:A39:A38
Extra
PDB:
ATOM 1 O3' A A 38 -6.952 63.774 -2.211 1.00 66.11 O
ATOM 2 P U A 39 -7.338 63.350 -3.706 1.00 65.21 P
ATOM 3 OP1 U A 39 -6.236 63.731 -4.623 1.00 65.17 O
ATOM 4 OP2 U A 39 -8.708 63.863 -3.942 1.00 65.28 O
ATOM 5 O5' U A 39 -7.424 61.751 -3.639 1.00 63.67 O
ATOM 6 C5' U A 39 -6.324 60.937 -3.218 1.00 61.18 C
ATOM 7 C4' U A 39 -6.753 59.877 -2.206 1.00 59.18 C
ATOM 8 O4' U A 39 -7.156 60.514 -0.961 1.00 58.84 O
ATOM 9 C3' U A 39 -7.925 58.969 -2.590 1.00 57.80 C
ATOM 10 O3' U A 39 -7.736 57.662 -2.027 1.00 55.86 O
ATOM 11 C2' U A 39 -9.100 59.678 -1.915 1.00 57.96 C
ATOM 12 O2' U A 39 -10.226 58.838 -1.747 1.00 58.05 O
ATOM 13 C1' U A 39 -8.432 60.023 -0.584 1.00 58.14 C
ATOM 14 N1 U A 39 -9.130 61.019 0.306 1.00 57.83 N
ATOM 15 C2 U A 39 -10.102 60.584 1.196 1.00 57.71 C
ATOM 16 O2 U A 39 -10.454 59.423 1.308 1.00 57.68 O
ATOM 17 N3 U A 39 -10.669 61.572 1.968 1.00 57.80 N
ATOM 18 C4 U A 39 -10.368 62.924 1.947 1.00 58.14 C
ATOM 19 O4 U A 39 -10.963 63.691 2.699 1.00 58.17 O
ATOM 20 C5 U A 39 -9.344 63.305 1.001 1.00 58.21 C
ATOM 21 C6 U A 39 -8.777 62.358 0.238 1.00 58.13 C
ATOM 22 P C A 40 -7.085 56.420 -2.811 1.00 54.07 P
ATOM 23 OP1 C A 40 -6.425 56.931 -4.035 1.00 53.86 O
ATOM 24 OP2 C A 40 -8.130 55.376 -2.912 1.00 53.98 O
ATOM 25 O5' C A 40 -5.952 55.887 -1.808 1.00 51.90 O
TER
ATOM 1 O3' C B 37 -1.007 65.493 -0.484 1.00 70.91 O
ATOM 2 P A B 38 -1.584 66.343 -1.716 1.00 70.32 P
ATOM 3 OP1 A B 38 -0.909 65.869 -2.946 1.00 70.08 O
ATOM 4 OP2 A B 38 -1.543 67.780 -1.362 1.00 70.16 O
ATOM 5 O5' A B 38 -3.115 65.886 -1.782 1.00 69.77 O
ATOM 6 C5' A B 38 -3.466 64.523 -2.000 1.00 68.74 C
ATOM 7 C4' A B 38 -4.779 64.214 -1.308 1.00 67.90 C
ATOM 8 O4' A B 38 -4.755 64.746 0.039 1.00 67.79 O
ATOM 9 C3' A B 38 -6.007 64.816 -1.983 1.00 67.36 C
ATOM 10 O3' A B 38 -6.952 63.774 -2.211 1.00 66.11 O
ATOM 11 C2' A B 38 -6.504 65.882 -1.002 1.00 67.63 C
ATOM 12 O2' A B 38 -7.913 66.019 -0.993 1.00 68.00 O
ATOM 13 C1' A B 38 -6.004 65.337 0.332 1.00 67.55 C
ATOM 14 N9 A B 38 -5.798 66.348 1.368 1.00 67.38 N
ATOM 15 C8 A B 38 -4.742 67.213 1.466 1.00 67.39 C
ATOM 16 N7 A B 38 -4.805 68.016 2.501 1.00 67.43 N
ATOM 17 C5 A B 38 -5.984 67.656 3.131 1.00 67.33 C
ATOM 18 C6 A B 38 -6.624 68.133 4.299 1.00 67.19 C
ATOM 19 N6 A B 38 -6.129 69.122 5.053 1.00 67.00 N
ATOM 20 N1 A B 38 -7.794 67.555 4.662 1.00 67.02 N
ATOM 21 C2 A B 38 -8.287 66.564 3.901 1.00 67.05 C
ATOM 22 N3 A B 38 -7.774 66.033 2.786 1.00 67.17 N
ATOM 23 C4 A B 38 -6.610 66.625 2.448 1.00 67.28 C
ATOM 24 P U B 39 -7.338 63.350 -3.706 1.00 65.21 P
ATOM 25 OP1 U B 39 -6.236 63.731 -4.623 1.00 65.17 O
ATOM 26 OP2 U B 39 -8.708 63.863 -3.942 1.00 65.28 O
ATOM 27 O5' U B 39 -7.424 61.751 -3.639 1.00 63.67 O
TER
ATOM 2 P U A 39 -7.338 63.350 -3.706 1.00 65.21 P
ATOM 3 OP1 U A 39 -6.236 63.731 -4.623 1.00 65.17 O
ATOM 4 OP2 U A 39 -8.708 63.863 -3.942 1.00 65.28 O
ATOM 5 O5' U A 39 -7.424 61.751 -3.639 1.00 63.67 O
ATOM 6 C5' U A 39 -6.324 60.937 -3.218 1.00 61.18 C
ATOM 7 C4' U A 39 -6.753 59.877 -2.206 1.00 59.18 C
ATOM 8 O4' U A 39 -7.156 60.514 -0.961 1.00 58.84 O
ATOM 9 C3' U A 39 -7.925 58.969 -2.590 1.00 57.80 C
ATOM 10 O3' U A 39 -7.736 57.662 -2.027 1.00 55.86 O
ATOM 11 C2' U A 39 -9.100 59.678 -1.915 1.00 57.96 C
ATOM 12 O2' U A 39 -10.226 58.838 -1.747 1.00 58.05 O
ATOM 13 C1' U A 39 -8.432 60.023 -0.584 1.00 58.14 C
ATOM 14 N1 U A 39 -9.130 61.019 0.306 1.00 57.83 N
ATOM 15 C2 U A 39 -10.102 60.584 1.196 1.00 57.71 C
ATOM 16 O2 U A 39 -10.454 59.423 1.308 1.00 57.68 O
ATOM 17 N3 U A 39 -10.669 61.572 1.968 1.00 57.80 N
ATOM 18 C4 U A 39 -10.368 62.924 1.947 1.00 58.14 C
ATOM 19 O4 U A 39 -10.963 63.691 2.699 1.00 58.17 O
ATOM 20 C5 U A 39 -9.344 63.305 1.001 1.00 58.21 C
ATOM 21 C6 U A 39 -8.777 62.358 0.238 1.00 58.13 C
ATOM 22 P C A 40 -7.085 56.420 -2.811 1.00 54.07 P
ATOM 23 OP1 C A 40 -6.425 56.931 -4.035 1.00 53.86 O
ATOM 24 OP2 C A 40 -8.130 55.376 -2.912 1.00 53.98 O
ATOM 25 O5' C A 40 -5.952 55.887 -1.808 1.00 51.90 O
TER
ATOM 1 O3' C B 37 -1.007 65.493 -0.484 1.00 70.91 O
ATOM 2 P A B 38 -1.584 66.343 -1.716 1.00 70.32 P
ATOM 3 OP1 A B 38 -0.909 65.869 -2.946 1.00 70.08 O
ATOM 4 OP2 A B 38 -1.543 67.780 -1.362 1.00 70.16 O
ATOM 5 O5' A B 38 -3.115 65.886 -1.782 1.00 69.77 O
ATOM 6 C5' A B 38 -3.466 64.523 -2.000 1.00 68.74 C
ATOM 7 C4' A B 38 -4.779 64.214 -1.308 1.00 67.90 C
ATOM 8 O4' A B 38 -4.755 64.746 0.039 1.00 67.79 O
ATOM 9 C3' A B 38 -6.007 64.816 -1.983 1.00 67.36 C
ATOM 10 O3' A B 38 -6.952 63.774 -2.211 1.00 66.11 O
ATOM 11 C2' A B 38 -6.504 65.882 -1.002 1.00 67.63 C
ATOM 12 O2' A B 38 -7.913 66.019 -0.993 1.00 68.00 O
ATOM 13 C1' A B 38 -6.004 65.337 0.332 1.00 67.55 C
ATOM 14 N9 A B 38 -5.798 66.348 1.368 1.00 67.38 N
ATOM 15 C8 A B 38 -4.742 67.213 1.466 1.00 67.39 C
ATOM 16 N7 A B 38 -4.805 68.016 2.501 1.00 67.43 N
ATOM 17 C5 A B 38 -5.984 67.656 3.131 1.00 67.33 C
ATOM 18 C6 A B 38 -6.624 68.133 4.299 1.00 67.19 C
ATOM 19 N6 A B 38 -6.129 69.122 5.053 1.00 67.00 N
ATOM 20 N1 A B 38 -7.794 67.555 4.662 1.00 67.02 N
ATOM 21 C2 A B 38 -8.287 66.564 3.901 1.00 67.05 C
ATOM 22 N3 A B 38 -7.774 66.033 2.786 1.00 67.17 N
ATOM 23 C4 A B 38 -6.610 66.625 2.448 1.00 67.28 C
ATOM 24 P U B 39 -7.338 63.350 -3.706 1.00 65.21 P
ATOM 25 OP1 U B 39 -6.236 63.731 -4.623 1.00 65.17 O
ATOM 26 OP2 U B 39 -8.708 63.863 -3.942 1.00 65.28 O
ATOM 27 O5' U B 39 -7.424 61.751 -3.639 1.00 63.67 O
TER
Atoms:
C4: (-10.368,62.924,1.947)
N3: (-10.669,61.572,1.968)
OP1: (-6.236,63.731,-4.623)
OP2: (-8.708,63.863,-3.942)
C2: (-10.102,60.584,1.196)
C1': (-8.432,60.023,-0.584)
C3': (-7.925,58.969,-2.590)
O5': (-7.424,61.751,-3.639)
O4': (-7.156,60.514,-0.961)
C5': (-6.324,60.937,-3.218)
P: (-7.338,63.350,-3.706)
C4': (-6.753,59.877,-2.206)
C2': (-9.100,59.678,-1.915)
O2': (-10.226,58.838,-1.747)
N1: (-9.130,61.019,0.306)
O4: (-10.963,63.691,2.699)
O2: (-10.454,59.423,1.308)
C6: (-8.777,62.358,0.238)
C5: (-9.344,63.305,1.001)
O3': (-7.736,57.662,-2.027)
N3: (-10.669,61.572,1.968)
OP1: (-6.236,63.731,-4.623)
OP2: (-8.708,63.863,-3.942)
C2: (-10.102,60.584,1.196)
C1': (-8.432,60.023,-0.584)
C3': (-7.925,58.969,-2.590)
O5': (-7.424,61.751,-3.639)
O4': (-7.156,60.514,-0.961)
C5': (-6.324,60.937,-3.218)
P: (-7.338,63.350,-3.706)
C4': (-6.753,59.877,-2.206)
C2': (-9.100,59.678,-1.915)
O2': (-10.226,58.838,-1.747)
N1: (-9.130,61.019,0.306)
O4: (-10.963,63.691,2.699)
O2: (-10.454,59.423,1.308)
C6: (-8.777,62.358,0.238)
C5: (-9.344,63.305,1.001)
O3': (-7.736,57.662,-2.027)
OP1: (-0.909,65.869,-2.946)
OP2: (-1.543,67.780,-1.362)
C3': (-6.007,64.816,-1.983)
C1': (-6.004,65.337,0.332)
C5': (-3.466,64.523,-2.000)
O4': (-4.755,64.746,0.039)
C8: (-4.742,67.213,1.466)
O2': (-7.913,66.019,-0.993)
C6: (-6.624,68.133,4.299)
C5: (-5.984,67.656,3.131)
C4: (-6.610,66.625,2.448)
P: (-1.584,66.343,-1.716)
C4': (-4.779,64.214,-1.308)
C2': (-6.504,65.882,-1.002)
C2: (-8.287,66.564,3.901)
N1: (-7.794,67.555,4.662)
N3: (-7.774,66.033,2.786)
N6: (-6.129,69.122,5.053)
N7: (-4.805,68.016,2.501)
N9: (-5.798,66.348,1.368)
O5': (-3.115,65.886,-1.782)
O3': (-6.952,63.774,-2.211)
OP2: (-1.543,67.780,-1.362)
C3': (-6.007,64.816,-1.983)
C1': (-6.004,65.337,0.332)
C5': (-3.466,64.523,-2.000)
O4': (-4.755,64.746,0.039)
C8: (-4.742,67.213,1.466)
O2': (-7.913,66.019,-0.993)
C6: (-6.624,68.133,4.299)
C5: (-5.984,67.656,3.131)
C4: (-6.610,66.625,2.448)
P: (-1.584,66.343,-1.716)
C4': (-4.779,64.214,-1.308)
C2': (-6.504,65.882,-1.002)
C2: (-8.287,66.564,3.901)
N1: (-7.794,67.555,4.662)
N3: (-7.774,66.033,2.786)
N6: (-6.129,69.122,5.053)
N7: (-4.805,68.016,2.501)
N9: (-5.798,66.348,1.368)
O5': (-3.115,65.886,-1.782)
O3': (-6.952,63.774,-2.211)
Image (generated by PyMOL):