Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IBK:A5:A7
Extra
PDB:
ATOM 1 O3' G A 4 2.623 33.288 33.243 1.00 22.43 O
ATOM 2 P U A 5 2.076 34.733 32.813 1.00 20.82 P
ATOM 3 OP1 U A 5 0.735 34.564 32.237 1.00 20.60 O
ATOM 4 OP2 U A 5 3.140 35.423 32.055 1.00 19.75 O
ATOM 5 O5' U A 5 1.905 35.460 34.186 1.00 19.98 O
ATOM 6 C5' U A 5 2.978 36.078 34.765 1.00 22.81 C
ATOM 7 C4' U A 5 2.702 36.213 36.230 1.00 27.96 C
ATOM 8 O4' U A 5 2.623 34.903 36.829 1.00 27.01 O
ATOM 9 C3' U A 5 3.757 36.980 37.031 1.00 30.60 C
ATOM 10 O3' U A 5 3.180 38.224 37.522 1.00 30.78 O
ATOM 11 C2' U A 5 4.128 35.997 38.169 1.00 28.12 C
ATOM 12 O2' U A 5 4.221 36.609 39.426 1.00 30.02 O
ATOM 13 C1' U A 5 2.951 35.052 38.169 1.00 28.35 C
ATOM 14 N1 U A 5 3.285 33.756 38.752 1.00 28.67 N
ATOM 15 C2 U A 5 2.432 33.180 39.682 1.00 28.08 C
ATOM 16 O2 U A 5 1.356 33.657 40.001 1.00 29.36 O
ATOM 17 N3 U A 5 2.872 31.999 40.198 1.00 25.80 N
ATOM 18 C4 U A 5 4.060 31.379 39.928 1.00 24.39 C
ATOM 19 O4 U A 5 4.325 30.345 40.487 1.00 30.68 O
ATOM 20 C5 U A 5 4.895 32.034 38.971 1.00 26.80 C
ATOM 21 C6 U A 5 4.498 33.183 38.444 1.00 28.48 C
ATOM 22 P U A 6 3.801 39.636 37.078 1.00 28.55 P
ATOM 23 OP1 U A 6 2.922 40.702 37.608 1.00 33.00 O
ATOM 24 OP2 U A 6 4.089 39.570 35.627 1.00 29.56 O
ATOM 25 O5' U A 6 5.173 39.665 37.910 1.00 26.68 O
TER
ATOM 1 O3' U B 6 8.901 38.789 37.997 1.00 26.52 O
ATOM 2 P A B 7 9.002 37.391 37.210 1.00 24.73 P
ATOM 3 OP1 A B 7 10.202 37.458 36.353 1.00 26.26 O
ATOM 4 OP2 A B 7 7.665 37.075 36.655 1.00 21.06 O
ATOM 5 O5' A B 7 9.276 36.359 38.369 1.00 25.62 O
ATOM 6 C5' A B 7 10.527 36.320 38.990 1.00 24.46 C
ATOM 7 C4' A B 7 10.685 34.988 39.659 1.00 24.12 C
ATOM 8 O4' A B 7 9.666 34.867 40.691 1.00 21.05 O
ATOM 9 C3' A B 7 10.455 33.807 38.722 1.00 23.79 C
ATOM 10 O3' A B 7 11.273 32.738 39.104 1.00 26.99 O
ATOM 11 C2' A B 7 8.988 33.489 38.950 1.00 22.19 C
ATOM 12 O2' A B 7 8.667 32.136 38.645 1.00 20.04 O
ATOM 13 C1' A B 7 8.892 33.734 40.446 1.00 20.53 C
ATOM 14 N9 A B 7 7.545 33.986 40.908 1.00 20.56 N
ATOM 15 C8 A B 7 6.719 34.992 40.508 1.00 17.54 C
ATOM 16 N7 A B 7 5.535 34.945 41.070 1.00 21.32 N
ATOM 17 C5 A B 7 5.591 33.827 41.898 1.00 18.62 C
ATOM 18 C6 A B 7 4.655 33.242 42.786 1.00 19.37 C
ATOM 19 N6 A B 7 3.439 33.733 42.992 1.00 19.98 N
ATOM 20 N1 A B 7 5.027 32.115 43.449 1.00 20.23 N
ATOM 21 C2 A B 7 6.258 31.638 43.260 1.00 16.88 C
ATOM 22 N3 A B 7 7.226 32.111 42.458 1.00 20.96 N
ATOM 23 C4 A B 7 6.821 33.222 41.806 1.00 18.44 C
ATOM 24 P G B 8 12.476 32.322 38.179 1.00 25.60 P
ATOM 25 OP1 G B 8 13.369 31.493 39.002 1.00 32.17 O
ATOM 26 OP2 G B 8 12.982 33.526 37.497 1.00 27.16 O
ATOM 27 O5' G B 8 11.766 31.440 37.062 1.00 23.45 O
TER
ATOM 2 P U A 5 2.076 34.733 32.813 1.00 20.82 P
ATOM 3 OP1 U A 5 0.735 34.564 32.237 1.00 20.60 O
ATOM 4 OP2 U A 5 3.140 35.423 32.055 1.00 19.75 O
ATOM 5 O5' U A 5 1.905 35.460 34.186 1.00 19.98 O
ATOM 6 C5' U A 5 2.978 36.078 34.765 1.00 22.81 C
ATOM 7 C4' U A 5 2.702 36.213 36.230 1.00 27.96 C
ATOM 8 O4' U A 5 2.623 34.903 36.829 1.00 27.01 O
ATOM 9 C3' U A 5 3.757 36.980 37.031 1.00 30.60 C
ATOM 10 O3' U A 5 3.180 38.224 37.522 1.00 30.78 O
ATOM 11 C2' U A 5 4.128 35.997 38.169 1.00 28.12 C
ATOM 12 O2' U A 5 4.221 36.609 39.426 1.00 30.02 O
ATOM 13 C1' U A 5 2.951 35.052 38.169 1.00 28.35 C
ATOM 14 N1 U A 5 3.285 33.756 38.752 1.00 28.67 N
ATOM 15 C2 U A 5 2.432 33.180 39.682 1.00 28.08 C
ATOM 16 O2 U A 5 1.356 33.657 40.001 1.00 29.36 O
ATOM 17 N3 U A 5 2.872 31.999 40.198 1.00 25.80 N
ATOM 18 C4 U A 5 4.060 31.379 39.928 1.00 24.39 C
ATOM 19 O4 U A 5 4.325 30.345 40.487 1.00 30.68 O
ATOM 20 C5 U A 5 4.895 32.034 38.971 1.00 26.80 C
ATOM 21 C6 U A 5 4.498 33.183 38.444 1.00 28.48 C
ATOM 22 P U A 6 3.801 39.636 37.078 1.00 28.55 P
ATOM 23 OP1 U A 6 2.922 40.702 37.608 1.00 33.00 O
ATOM 24 OP2 U A 6 4.089 39.570 35.627 1.00 29.56 O
ATOM 25 O5' U A 6 5.173 39.665 37.910 1.00 26.68 O
TER
ATOM 1 O3' U B 6 8.901 38.789 37.997 1.00 26.52 O
ATOM 2 P A B 7 9.002 37.391 37.210 1.00 24.73 P
ATOM 3 OP1 A B 7 10.202 37.458 36.353 1.00 26.26 O
ATOM 4 OP2 A B 7 7.665 37.075 36.655 1.00 21.06 O
ATOM 5 O5' A B 7 9.276 36.359 38.369 1.00 25.62 O
ATOM 6 C5' A B 7 10.527 36.320 38.990 1.00 24.46 C
ATOM 7 C4' A B 7 10.685 34.988 39.659 1.00 24.12 C
ATOM 8 O4' A B 7 9.666 34.867 40.691 1.00 21.05 O
ATOM 9 C3' A B 7 10.455 33.807 38.722 1.00 23.79 C
ATOM 10 O3' A B 7 11.273 32.738 39.104 1.00 26.99 O
ATOM 11 C2' A B 7 8.988 33.489 38.950 1.00 22.19 C
ATOM 12 O2' A B 7 8.667 32.136 38.645 1.00 20.04 O
ATOM 13 C1' A B 7 8.892 33.734 40.446 1.00 20.53 C
ATOM 14 N9 A B 7 7.545 33.986 40.908 1.00 20.56 N
ATOM 15 C8 A B 7 6.719 34.992 40.508 1.00 17.54 C
ATOM 16 N7 A B 7 5.535 34.945 41.070 1.00 21.32 N
ATOM 17 C5 A B 7 5.591 33.827 41.898 1.00 18.62 C
ATOM 18 C6 A B 7 4.655 33.242 42.786 1.00 19.37 C
ATOM 19 N6 A B 7 3.439 33.733 42.992 1.00 19.98 N
ATOM 20 N1 A B 7 5.027 32.115 43.449 1.00 20.23 N
ATOM 21 C2 A B 7 6.258 31.638 43.260 1.00 16.88 C
ATOM 22 N3 A B 7 7.226 32.111 42.458 1.00 20.96 N
ATOM 23 C4 A B 7 6.821 33.222 41.806 1.00 18.44 C
ATOM 24 P G B 8 12.476 32.322 38.179 1.00 25.60 P
ATOM 25 OP1 G B 8 13.369 31.493 39.002 1.00 32.17 O
ATOM 26 OP2 G B 8 12.982 33.526 37.497 1.00 27.16 O
ATOM 27 O5' G B 8 11.766 31.440 37.062 1.00 23.45 O
TER
Atoms:
C4: (4.060,31.379,39.928)
N3: (2.872,31.999,40.198)
OP1: (0.735,34.564,32.237)
OP2: (3.140,35.423,32.055)
C2: (2.432,33.180,39.682)
C1': (2.951,35.052,38.169)
C3': (3.757,36.980,37.031)
O5': (1.905,35.460,34.186)
O4': (2.623,34.903,36.829)
C5': (2.978,36.078,34.765)
P: (2.076,34.733,32.813)
C4': (2.702,36.213,36.230)
C2': (4.128,35.997,38.169)
O2': (4.221,36.609,39.426)
N1: (3.285,33.756,38.752)
O4: (4.325,30.345,40.487)
O2: (1.356,33.657,40.001)
C6: (4.498,33.183,38.444)
C5: (4.895,32.034,38.971)
O3': (3.180,38.224,37.522)
N3: (2.872,31.999,40.198)
OP1: (0.735,34.564,32.237)
OP2: (3.140,35.423,32.055)
C2: (2.432,33.180,39.682)
C1': (2.951,35.052,38.169)
C3': (3.757,36.980,37.031)
O5': (1.905,35.460,34.186)
O4': (2.623,34.903,36.829)
C5': (2.978,36.078,34.765)
P: (2.076,34.733,32.813)
C4': (2.702,36.213,36.230)
C2': (4.128,35.997,38.169)
O2': (4.221,36.609,39.426)
N1: (3.285,33.756,38.752)
O4: (4.325,30.345,40.487)
O2: (1.356,33.657,40.001)
C6: (4.498,33.183,38.444)
C5: (4.895,32.034,38.971)
O3': (3.180,38.224,37.522)
OP1: (10.202,37.458,36.353)
OP2: (7.665,37.075,36.655)
C3': (10.455,33.807,38.722)
C1': (8.892,33.734,40.446)
C5': (10.527,36.320,38.990)
O4': (9.666,34.867,40.691)
C8: (6.719,34.992,40.508)
O2': (8.667,32.136,38.645)
C6: (4.655,33.242,42.786)
C5: (5.591,33.827,41.898)
C4: (6.821,33.222,41.806)
P: (9.002,37.391,37.210)
C4': (10.685,34.988,39.659)
C2': (8.988,33.489,38.950)
C2: (6.258,31.638,43.260)
N1: (5.027,32.115,43.449)
N3: (7.226,32.111,42.458)
N6: (3.439,33.733,42.992)
N7: (5.535,34.945,41.070)
N9: (7.545,33.986,40.908)
O5': (9.276,36.359,38.369)
O3': (11.273,32.738,39.104)
OP2: (7.665,37.075,36.655)
C3': (10.455,33.807,38.722)
C1': (8.892,33.734,40.446)
C5': (10.527,36.320,38.990)
O4': (9.666,34.867,40.691)
C8: (6.719,34.992,40.508)
O2': (8.667,32.136,38.645)
C6: (4.655,33.242,42.786)
C5: (5.591,33.827,41.898)
C4: (6.821,33.222,41.806)
P: (9.002,37.391,37.210)
C4': (10.685,34.988,39.659)
C2': (8.988,33.489,38.950)
C2: (6.258,31.638,43.260)
N1: (5.027,32.115,43.449)
N3: (7.226,32.111,42.458)
N6: (3.439,33.733,42.992)
N7: (5.535,34.945,41.070)
N9: (7.545,33.986,40.908)
O5': (9.276,36.359,38.369)
O3': (11.273,32.738,39.104)
Image (generated by PyMOL):