ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A2483:A2484

Extra

PDB:
ATOM 1 O3' C A2482 90.309 -53.830 66.354 1.00119.90 O
ATOM 2 P U A2483 91.745 -53.171 66.581 1.00 98.46 P
ATOM 3 OP1 U A2483 91.856 -52.843 68.019 1.00176.62 O
ATOM 4 OP2 U A2483 91.895 -52.081 65.589 1.00168.03 O
ATOM 5 O5' U A2483 92.720 -54.363 66.225 1.00 76.73 O
ATOM 6 C5' U A2483 92.569 -55.635 66.843 1.00 78.65 C
ATOM 7 C4' U A2483 93.694 -56.578 66.472 1.00 72.93 C
ATOM 8 O4' U A2483 93.488 -57.098 65.135 1.00 73.02 O
ATOM 9 C3' U A2483 95.091 -55.966 66.455 1.00 72.87 C
ATOM 10 O3' U A2483 95.694 -55.977 67.740 1.00 60.80 O
ATOM 11 C2' U A2483 95.835 -56.796 65.407 1.00 74.30 C
ATOM 12 O2' U A2483 96.352 -57.996 65.977 1.00 69.73 O
ATOM 13 C1' U A2483 94.708 -57.163 64.434 1.00 75.92 C
ATOM 14 N1 U A2483 94.627 -56.237 63.274 1.00 99.93 N
ATOM 15 C2 U A2483 94.737 -56.778 62.011 1.00106.31 C
ATOM 16 O2 U A2483 94.920 -57.969 61.825 1.00111.03 O
ATOM 17 N3 U A2483 94.638 -55.880 60.975 1.00108.45 N
ATOM 18 C4 U A2483 94.432 -54.521 61.072 1.00106.84 C
ATOM 19 O4 U A2483 94.361 -53.828 60.060 1.00106.58 O
ATOM 20 C5 U A2483 94.319 -54.043 62.406 1.00105.29 C
ATOM 21 C6 U A2483 94.410 -54.893 63.431 1.00104.30 C
ATOM 22 P A A2484 97.130 -55.350 67.962 1.00 78.58 P
ATOM 23 OP1 A A2484 98.102 -56.206 67.240 1.00142.17 O
ATOM 24 OP2 A A2484 97.295 -55.159 69.414 1.00145.71 O
ATOM 25 O5' A A2484 97.005 -53.954 67.251 1.00 59.74 O
TER

ATOM 1 O3' U B2483 95.694 -55.977 67.740 1.00 60.80 O
ATOM 2 P A B2484 97.130 -55.350 67.962 1.00 78.58 P
ATOM 3 OP1 A B2484 98.102 -56.206 67.240 1.00142.17 O
ATOM 4 OP2 A B2484 97.295 -55.159 69.414 1.00145.71 O
ATOM 5 O5' A B2484 97.005 -53.954 67.251 1.00 59.74 O
ATOM 6 C5' A B2484 96.527 -52.834 67.964 1.00 69.43 C
ATOM 7 C4' A B2484 96.710 -51.562 67.183 1.00 70.71 C
ATOM 8 O4' A B2484 97.563 -51.822 66.044 1.00 75.13 O
ATOM 9 C3' A B2484 95.430 -50.969 66.629 1.00 83.10 C
ATOM 10 O3' A B2484 95.541 -49.552 66.599 1.00 90.20 O
ATOM 11 C2' A B2484 95.377 -51.510 65.208 1.00 81.07 C
ATOM 12 O2' A B2484 94.642 -50.694 64.318 1.00 83.03 O
ATOM 13 C1' A B2484 96.861 -51.568 64.837 1.00 82.20 C
ATOM 14 N9 A B2484 97.214 -52.636 63.881 1.00 86.34 N
ATOM 15 C8 A B2484 97.665 -53.882 64.238 1.00 85.07 C
ATOM 16 N7 A B2484 97.952 -54.667 63.230 1.00 87.14 N
ATOM 17 C5 A B2484 97.696 -53.890 62.115 1.00 88.54 C
ATOM 18 C6 A B2484 97.816 -54.170 60.740 1.00 85.99 C
ATOM 19 N6 A B2484 98.235 -55.338 60.255 1.00 85.37 N
ATOM 20 N1 A B2484 97.485 -53.195 59.876 1.00 81.33 N
ATOM 21 C2 A B2484 97.069 -52.029 60.376 1.00 81.44 C
ATOM 22 N3 A B2484 96.918 -51.654 61.643 1.00 84.22 N
ATOM 23 C4 A B2484 97.249 -52.636 62.493 1.00 85.01 C
ATOM 24 P G B2485 94.682 -48.673 67.623 1.00 96.77 P
ATOM 25 OP1 G B2485 95.557 -48.374 68.769 1.00 95.25 O
ATOM 26 OP2 G B2485 93.408 -49.405 67.865 1.00 98.85 O
ATOM 27 O5' G B2485 94.399 -47.348 66.797 1.00125.16 O
TER

Atoms:
C4: (94.432,-54.521,61.072)
N3: (94.638,-55.880,60.975)
OP1: (91.856,-52.843,68.019)
OP2: (91.895,-52.081,65.589)
C2: (94.737,-56.778,62.011)
C1': (94.708,-57.163,64.434)
C3': (95.091,-55.966,66.455)
O5': (92.720,-54.363,66.225)
O4': (93.488,-57.098,65.135)
C5': (92.569,-55.635,66.843)
P: (91.745,-53.171,66.581)
C4': (93.694,-56.578,66.472)
C2': (95.835,-56.796,65.407)
O2': (96.352,-57.996,65.977)
N1: (94.627,-56.237,63.274)
O4: (94.361,-53.828,60.060)
O2: (94.920,-57.969,61.825)
C6: (94.410,-54.893,63.431)
C5: (94.319,-54.043,62.406)
O3': (95.694,-55.977,67.740)
OP1: (98.102,-56.206,67.240)
OP2: (97.295,-55.159,69.414)
C3': (95.430,-50.969,66.629)
C1': (96.861,-51.568,64.837)
C5': (96.527,-52.834,67.964)
O4': (97.563,-51.822,66.044)
C8: (97.665,-53.882,64.238)
O2': (94.642,-50.694,64.318)
C6: (97.816,-54.170,60.740)
C5: (97.696,-53.890,62.115)
C4: (97.249,-52.636,62.493)
P: (97.130,-55.350,67.962)
C4': (96.710,-51.562,67.183)
C2': (95.377,-51.510,65.208)
C2: (97.069,-52.029,60.376)
N1: (97.485,-53.195,59.876)
N3: (96.918,-51.654,61.643)
N6: (98.235,-55.338,60.255)
N7: (97.952,-54.667,63.230)
N9: (97.214,-52.636,63.881)
O5': (97.005,-53.954,67.251)
O3': (95.541,-49.552,66.599)
Image (generated by PyMOL):
PyMOL image
show in jmol