Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12578:11073
Extra
PDB:
ATOM 1 O3' C A2577 30.952 -4.312 38.257 1.00 46.83 O
ATOM 2 P U A2578 29.698 -3.780 37.411 1.00 40.53 P
ATOM 3 OP1 U A2578 30.018 -3.945 35.970 1.00 40.77 O
ATOM 4 OP2 U A2578 29.398 -2.450 37.901 1.00 40.50 O
ATOM 5 O5' U A2578 28.547 -4.791 37.818 1.00 40.53 O
ATOM 6 C5' U A2578 28.595 -6.149 37.410 1.00 40.58 C
ATOM 7 C4' U A2578 27.538 -6.958 38.092 1.00 40.53 C
ATOM 8 O4' U A2578 27.568 -6.699 39.499 1.00 40.28 O
ATOM 9 C3' U A2578 26.102 -6.640 37.703 1.00 40.74 C
ATOM 10 O3' U A2578 25.726 -7.271 36.504 1.00 41.01 O
ATOM 11 C2' U A2578 25.320 -7.140 38.893 1.00 40.60 C
ATOM 12 O2' U A2578 25.176 -8.541 38.820 1.00 40.62 O
ATOM 13 C1' U A2578 26.270 -6.850 40.033 1.00 40.31 C
ATOM 14 N1 U A2578 25.916 -5.647 40.781 1.00 40.23 N
ATOM 15 C2 U A2578 24.782 -5.582 41.611 1.00 40.20 C
ATOM 16 O2 U A2578 23.941 -6.469 41.742 1.00 40.26 O
ATOM 17 N3 U A2578 24.635 -4.411 42.294 1.00 40.13 N
ATOM 18 C4 U A2578 25.508 -3.369 42.221 1.00 40.09 C
ATOM 19 O4 U A2578 25.352 -2.335 42.838 1.00 40.04 O
ATOM 20 C5 U A2578 26.610 -3.560 41.394 1.00 40.11 C
ATOM 21 C6 U A2578 26.809 -4.646 40.704 1.00 40.18 C
ATOM 22 P U A2579 25.249 -6.414 35.262 1.00 47.18 P
ATOM 23 OP1 U A2579 25.450 -7.240 34.070 1.00 47.40 O
ATOM 24 OP2 U A2579 25.922 -5.094 35.329 1.00 47.12 O
ATOM 25 O5' U A2579 23.708 -6.256 35.555 1.00 47.29 O
TER
ATOM 1 O3' U B1072 22.296 -15.166 35.110 1.00 45.15 O
ATOM 2 P A B1073 23.455 -16.090 35.770 1.00 42.38 P
ATOM 3 OP1 A B1073 23.921 -17.006 34.671 1.00 42.61 O
ATOM 4 OP2 A B1073 22.891 -16.681 37.037 1.00 42.22 O
ATOM 5 O5' A B1073 24.612 -15.039 36.149 1.00 42.14 O
ATOM 6 C5' A B1073 25.063 -14.075 35.214 1.00 42.24 C
ATOM 7 C4' A B1073 25.243 -12.705 35.840 1.00 42.05 C
ATOM 8 O4' A B1073 24.132 -12.372 36.696 1.00 41.98 O
ATOM 9 C3' A B1073 26.468 -12.499 36.708 1.00 41.75 C
ATOM 10 O3' A B1073 27.589 -12.196 35.927 1.00 41.80 O
ATOM 11 C2' A B1073 26.069 -11.326 37.573 1.00 41.60 C
ATOM 12 O2' A B1073 26.277 -10.125 36.856 1.00 41.69 O
ATOM 13 C1' A B1073 24.567 -11.521 37.717 1.00 41.72 C
ATOM 14 N9 A B1073 24.148 -12.094 39.008 1.00 41.54 N
ATOM 15 C8 A B1073 23.598 -13.333 39.133 1.00 41.61 C
ATOM 16 N7 A B1073 23.177 -13.576 40.337 1.00 41.44 N
ATOM 17 C5 A B1073 23.431 -12.415 41.033 1.00 41.26 C
ATOM 18 C6 A B1073 23.177 -12.051 42.349 1.00 41.06 C
ATOM 19 N6 A B1073 22.666 -12.868 43.247 1.00 40.99 N
ATOM 20 N1 A B1073 23.501 -10.809 42.738 1.00 40.94 N
ATOM 21 C2 A B1073 24.107 -9.994 41.861 1.00 41.01 C
ATOM 22 N3 A B1073 24.401 -10.253 40.598 1.00 41.20 N
ATOM 23 C4 A B1073 24.018 -11.486 40.234 1.00 41.32 C
ATOM 24 P A B1074 29.017 -12.826 36.252 1.00 38.96 P
ATOM 25 OP1 A B1074 29.866 -12.588 35.019 1.00 39.13 O
ATOM 26 OP2 A B1074 28.800 -14.216 36.716 1.00 38.94 O
ATOM 27 O5' A B1074 29.508 -11.937 37.461 1.00 38.67 O
TER
ATOM 2 P U A2578 29.698 -3.780 37.411 1.00 40.53 P
ATOM 3 OP1 U A2578 30.018 -3.945 35.970 1.00 40.77 O
ATOM 4 OP2 U A2578 29.398 -2.450 37.901 1.00 40.50 O
ATOM 5 O5' U A2578 28.547 -4.791 37.818 1.00 40.53 O
ATOM 6 C5' U A2578 28.595 -6.149 37.410 1.00 40.58 C
ATOM 7 C4' U A2578 27.538 -6.958 38.092 1.00 40.53 C
ATOM 8 O4' U A2578 27.568 -6.699 39.499 1.00 40.28 O
ATOM 9 C3' U A2578 26.102 -6.640 37.703 1.00 40.74 C
ATOM 10 O3' U A2578 25.726 -7.271 36.504 1.00 41.01 O
ATOM 11 C2' U A2578 25.320 -7.140 38.893 1.00 40.60 C
ATOM 12 O2' U A2578 25.176 -8.541 38.820 1.00 40.62 O
ATOM 13 C1' U A2578 26.270 -6.850 40.033 1.00 40.31 C
ATOM 14 N1 U A2578 25.916 -5.647 40.781 1.00 40.23 N
ATOM 15 C2 U A2578 24.782 -5.582 41.611 1.00 40.20 C
ATOM 16 O2 U A2578 23.941 -6.469 41.742 1.00 40.26 O
ATOM 17 N3 U A2578 24.635 -4.411 42.294 1.00 40.13 N
ATOM 18 C4 U A2578 25.508 -3.369 42.221 1.00 40.09 C
ATOM 19 O4 U A2578 25.352 -2.335 42.838 1.00 40.04 O
ATOM 20 C5 U A2578 26.610 -3.560 41.394 1.00 40.11 C
ATOM 21 C6 U A2578 26.809 -4.646 40.704 1.00 40.18 C
ATOM 22 P U A2579 25.249 -6.414 35.262 1.00 47.18 P
ATOM 23 OP1 U A2579 25.450 -7.240 34.070 1.00 47.40 O
ATOM 24 OP2 U A2579 25.922 -5.094 35.329 1.00 47.12 O
ATOM 25 O5' U A2579 23.708 -6.256 35.555 1.00 47.29 O
TER
ATOM 1 O3' U B1072 22.296 -15.166 35.110 1.00 45.15 O
ATOM 2 P A B1073 23.455 -16.090 35.770 1.00 42.38 P
ATOM 3 OP1 A B1073 23.921 -17.006 34.671 1.00 42.61 O
ATOM 4 OP2 A B1073 22.891 -16.681 37.037 1.00 42.22 O
ATOM 5 O5' A B1073 24.612 -15.039 36.149 1.00 42.14 O
ATOM 6 C5' A B1073 25.063 -14.075 35.214 1.00 42.24 C
ATOM 7 C4' A B1073 25.243 -12.705 35.840 1.00 42.05 C
ATOM 8 O4' A B1073 24.132 -12.372 36.696 1.00 41.98 O
ATOM 9 C3' A B1073 26.468 -12.499 36.708 1.00 41.75 C
ATOM 10 O3' A B1073 27.589 -12.196 35.927 1.00 41.80 O
ATOM 11 C2' A B1073 26.069 -11.326 37.573 1.00 41.60 C
ATOM 12 O2' A B1073 26.277 -10.125 36.856 1.00 41.69 O
ATOM 13 C1' A B1073 24.567 -11.521 37.717 1.00 41.72 C
ATOM 14 N9 A B1073 24.148 -12.094 39.008 1.00 41.54 N
ATOM 15 C8 A B1073 23.598 -13.333 39.133 1.00 41.61 C
ATOM 16 N7 A B1073 23.177 -13.576 40.337 1.00 41.44 N
ATOM 17 C5 A B1073 23.431 -12.415 41.033 1.00 41.26 C
ATOM 18 C6 A B1073 23.177 -12.051 42.349 1.00 41.06 C
ATOM 19 N6 A B1073 22.666 -12.868 43.247 1.00 40.99 N
ATOM 20 N1 A B1073 23.501 -10.809 42.738 1.00 40.94 N
ATOM 21 C2 A B1073 24.107 -9.994 41.861 1.00 41.01 C
ATOM 22 N3 A B1073 24.401 -10.253 40.598 1.00 41.20 N
ATOM 23 C4 A B1073 24.018 -11.486 40.234 1.00 41.32 C
ATOM 24 P A B1074 29.017 -12.826 36.252 1.00 38.96 P
ATOM 25 OP1 A B1074 29.866 -12.588 35.019 1.00 39.13 O
ATOM 26 OP2 A B1074 28.800 -14.216 36.716 1.00 38.94 O
ATOM 27 O5' A B1074 29.508 -11.937 37.461 1.00 38.67 O
TER
Atoms:
C4: (25.508,-3.369,42.221)
N3: (24.635,-4.411,42.294)
OP1: (30.018,-3.945,35.970)
OP2: (29.398,-2.450,37.901)
C2: (24.782,-5.582,41.611)
C1': (26.270,-6.850,40.033)
C3': (26.102,-6.640,37.703)
O5': (28.547,-4.791,37.818)
O4': (27.568,-6.699,39.499)
C5': (28.595,-6.149,37.410)
P: (29.698,-3.780,37.411)
C4': (27.538,-6.958,38.092)
C2': (25.320,-7.140,38.893)
O2': (25.176,-8.541,38.820)
N1: (25.916,-5.647,40.781)
O4: (25.352,-2.335,42.838)
O2: (23.941,-6.469,41.742)
C6: (26.809,-4.646,40.704)
C5: (26.610,-3.560,41.394)
O3': (25.726,-7.271,36.504)
N3: (24.635,-4.411,42.294)
OP1: (30.018,-3.945,35.970)
OP2: (29.398,-2.450,37.901)
C2: (24.782,-5.582,41.611)
C1': (26.270,-6.850,40.033)
C3': (26.102,-6.640,37.703)
O5': (28.547,-4.791,37.818)
O4': (27.568,-6.699,39.499)
C5': (28.595,-6.149,37.410)
P: (29.698,-3.780,37.411)
C4': (27.538,-6.958,38.092)
C2': (25.320,-7.140,38.893)
O2': (25.176,-8.541,38.820)
N1: (25.916,-5.647,40.781)
O4: (25.352,-2.335,42.838)
O2: (23.941,-6.469,41.742)
C6: (26.809,-4.646,40.704)
C5: (26.610,-3.560,41.394)
O3': (25.726,-7.271,36.504)
OP1: (23.921,-17.006,34.671)
OP2: (22.891,-16.681,37.037)
C3': (26.468,-12.499,36.708)
C1': (24.567,-11.521,37.717)
C5': (25.063,-14.075,35.214)
O4': (24.132,-12.372,36.696)
C8: (23.598,-13.333,39.133)
O2': (26.277,-10.125,36.856)
C6: (23.177,-12.051,42.349)
C5: (23.431,-12.415,41.033)
C4: (24.018,-11.486,40.234)
P: (23.455,-16.090,35.770)
C4': (25.243,-12.705,35.840)
C2': (26.069,-11.326,37.573)
C2: (24.107,-9.994,41.861)
N1: (23.501,-10.809,42.738)
N3: (24.401,-10.253,40.598)
N6: (22.666,-12.868,43.247)
N7: (23.177,-13.576,40.337)
N9: (24.148,-12.094,39.008)
O5': (24.612,-15.039,36.149)
O3': (27.589,-12.196,35.927)
OP2: (22.891,-16.681,37.037)
C3': (26.468,-12.499,36.708)
C1': (24.567,-11.521,37.717)
C5': (25.063,-14.075,35.214)
O4': (24.132,-12.372,36.696)
C8: (23.598,-13.333,39.133)
O2': (26.277,-10.125,36.856)
C6: (23.177,-12.051,42.349)
C5: (23.431,-12.415,41.033)
C4: (24.018,-11.486,40.234)
P: (23.455,-16.090,35.770)
C4': (25.243,-12.705,35.840)
C2': (26.069,-11.326,37.573)
C2: (24.107,-9.994,41.861)
N1: (23.501,-10.809,42.738)
N3: (24.401,-10.253,40.598)
N6: (22.666,-12.868,43.247)
N7: (23.177,-13.576,40.337)
N9: (24.148,-12.094,39.008)
O5': (24.612,-15.039,36.149)
O3': (27.589,-12.196,35.927)
Image (generated by PyMOL):