Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2608:A2607
Extra
PDB:
ATOM 1 O3' A A2607 -56.575 -76.535 -5.886 1.00 0.01 O
ATOM 2 P U A2608 -55.657 -77.827 -5.822 1.00 0.01 P
ATOM 3 OP1 U A2608 -54.616 -77.577 -4.828 1.00 0.01 O
ATOM 4 OP2 U A2608 -55.261 -78.146 -7.186 1.00 0.01 O
ATOM 5 O5' U A2608 -56.647 -78.920 -5.285 1.00 0.01 O
ATOM 6 C5' U A2608 -56.176 -80.000 -4.517 1.00 0.01 C
ATOM 7 C4' U A2608 -57.303 -80.668 -3.822 1.00 0.01 C
ATOM 8 O4' U A2608 -57.769 -79.803 -2.778 1.00 0.01 O
ATOM 9 C3' U A2608 -58.525 -80.918 -4.675 1.00 0.01 C
ATOM 10 O3' U A2608 -58.437 -82.129 -5.386 1.00 0.01 O
ATOM 11 C2' U A2608 -59.638 -80.907 -3.662 1.00 0.01 C
ATOM 12 O2' U A2608 -59.658 -82.126 -2.940 1.00 0.01 O
ATOM 13 C1' U A2608 -59.163 -79.834 -2.716 1.00 0.01 C
ATOM 14 N1 U A2608 -59.675 -78.512 -3.050 1.00 0.01 N
ATOM 15 C2 U A2608 -61.000 -78.302 -2.932 1.00 0.01 C
ATOM 16 O2 U A2608 -61.775 -79.145 -2.623 1.00 0.01 O
ATOM 17 N3 U A2608 -61.420 -77.065 -3.195 1.00 0.01 N
ATOM 18 C4 U A2608 -60.645 -76.014 -3.524 1.00 0.01 C
ATOM 19 O4 U A2608 -61.188 -74.961 -3.729 1.00 0.01 O
ATOM 20 C5 U A2608 -59.261 -76.268 -3.611 1.00 0.01 C
ATOM 21 C6 U A2608 -58.830 -77.496 -3.361 1.00 0.01 C
ATOM 22 P C A2609 -59.054 -82.260 -6.849 1.00 0.01 P
ATOM 23 OP1 C A2609 -58.659 -83.578 -7.372 1.00 0.01 O
ATOM 24 OP2 C A2609 -58.675 -81.060 -7.596 1.00 0.01 O
ATOM 25 O5' C A2609 -60.585 -82.247 -6.570 1.00 0.01 O
TER
ATOM 1 O3' U B2606 -52.756 -71.365 -5.374 1.00 0.01 O
ATOM 2 P A B2607 -53.570 -72.002 -6.569 1.00 0.01 P
ATOM 3 OP1 A B2607 -52.801 -73.153 -7.041 1.00 0.01 O
ATOM 4 OP2 A B2607 -53.902 -70.931 -7.511 1.00 0.01 O
ATOM 5 O5' A B2607 -54.853 -72.486 -5.845 1.00 0.01 O
ATOM 6 C5' A B2607 -54.774 -73.534 -4.924 1.00 0.01 C
ATOM 7 C4' A B2607 -55.971 -74.414 -5.019 1.00 0.01 C
ATOM 8 O4' A B2607 -57.148 -73.584 -5.045 1.00 0.01 O
ATOM 9 C3' A B2607 -56.030 -75.291 -6.245 1.00 0.01 C
ATOM 10 O3' A B2607 -56.575 -76.535 -5.886 1.00 0.01 O
ATOM 11 C2' A B2607 -57.005 -74.578 -7.149 1.00 0.01 C
ATOM 12 O2' A B2607 -57.730 -75.450 -7.982 1.00 0.01 O
ATOM 13 C1' A B2607 -57.925 -73.883 -6.155 1.00 0.01 C
ATOM 14 N9 A B2607 -58.479 -72.636 -6.651 1.00 0.01 N
ATOM 15 C8 A B2607 -57.787 -71.527 -7.021 1.00 0.01 C
ATOM 16 N7 A B2607 -58.549 -70.566 -7.455 1.00 0.01 N
ATOM 17 C5 A B2607 -59.830 -71.102 -7.366 1.00 0.01 C
ATOM 18 C6 A B2607 -61.104 -70.613 -7.686 1.00 0.01 C
ATOM 19 N6 A B2607 -61.303 -69.392 -8.171 1.00 0.01 N
ATOM 20 N1 A B2607 -62.172 -71.384 -7.499 1.00 0.01 N
ATOM 21 C2 A B2607 -61.952 -72.571 -7.000 1.00 0.01 C
ATOM 22 N3 A B2607 -60.816 -73.139 -6.662 1.00 0.01 N
ATOM 23 C4 A B2607 -59.786 -72.358 -6.872 1.00 0.01 C
ATOM 24 P U B2608 -55.657 -77.827 -5.822 1.00 0.01 P
ATOM 25 OP1 U B2608 -54.616 -77.577 -4.828 1.00 0.01 O
ATOM 26 OP2 U B2608 -55.261 -78.146 -7.186 1.00 0.01 O
ATOM 27 O5' U B2608 -56.647 -78.920 -5.285 1.00 0.01 O
TER
ATOM 2 P U A2608 -55.657 -77.827 -5.822 1.00 0.01 P
ATOM 3 OP1 U A2608 -54.616 -77.577 -4.828 1.00 0.01 O
ATOM 4 OP2 U A2608 -55.261 -78.146 -7.186 1.00 0.01 O
ATOM 5 O5' U A2608 -56.647 -78.920 -5.285 1.00 0.01 O
ATOM 6 C5' U A2608 -56.176 -80.000 -4.517 1.00 0.01 C
ATOM 7 C4' U A2608 -57.303 -80.668 -3.822 1.00 0.01 C
ATOM 8 O4' U A2608 -57.769 -79.803 -2.778 1.00 0.01 O
ATOM 9 C3' U A2608 -58.525 -80.918 -4.675 1.00 0.01 C
ATOM 10 O3' U A2608 -58.437 -82.129 -5.386 1.00 0.01 O
ATOM 11 C2' U A2608 -59.638 -80.907 -3.662 1.00 0.01 C
ATOM 12 O2' U A2608 -59.658 -82.126 -2.940 1.00 0.01 O
ATOM 13 C1' U A2608 -59.163 -79.834 -2.716 1.00 0.01 C
ATOM 14 N1 U A2608 -59.675 -78.512 -3.050 1.00 0.01 N
ATOM 15 C2 U A2608 -61.000 -78.302 -2.932 1.00 0.01 C
ATOM 16 O2 U A2608 -61.775 -79.145 -2.623 1.00 0.01 O
ATOM 17 N3 U A2608 -61.420 -77.065 -3.195 1.00 0.01 N
ATOM 18 C4 U A2608 -60.645 -76.014 -3.524 1.00 0.01 C
ATOM 19 O4 U A2608 -61.188 -74.961 -3.729 1.00 0.01 O
ATOM 20 C5 U A2608 -59.261 -76.268 -3.611 1.00 0.01 C
ATOM 21 C6 U A2608 -58.830 -77.496 -3.361 1.00 0.01 C
ATOM 22 P C A2609 -59.054 -82.260 -6.849 1.00 0.01 P
ATOM 23 OP1 C A2609 -58.659 -83.578 -7.372 1.00 0.01 O
ATOM 24 OP2 C A2609 -58.675 -81.060 -7.596 1.00 0.01 O
ATOM 25 O5' C A2609 -60.585 -82.247 -6.570 1.00 0.01 O
TER
ATOM 1 O3' U B2606 -52.756 -71.365 -5.374 1.00 0.01 O
ATOM 2 P A B2607 -53.570 -72.002 -6.569 1.00 0.01 P
ATOM 3 OP1 A B2607 -52.801 -73.153 -7.041 1.00 0.01 O
ATOM 4 OP2 A B2607 -53.902 -70.931 -7.511 1.00 0.01 O
ATOM 5 O5' A B2607 -54.853 -72.486 -5.845 1.00 0.01 O
ATOM 6 C5' A B2607 -54.774 -73.534 -4.924 1.00 0.01 C
ATOM 7 C4' A B2607 -55.971 -74.414 -5.019 1.00 0.01 C
ATOM 8 O4' A B2607 -57.148 -73.584 -5.045 1.00 0.01 O
ATOM 9 C3' A B2607 -56.030 -75.291 -6.245 1.00 0.01 C
ATOM 10 O3' A B2607 -56.575 -76.535 -5.886 1.00 0.01 O
ATOM 11 C2' A B2607 -57.005 -74.578 -7.149 1.00 0.01 C
ATOM 12 O2' A B2607 -57.730 -75.450 -7.982 1.00 0.01 O
ATOM 13 C1' A B2607 -57.925 -73.883 -6.155 1.00 0.01 C
ATOM 14 N9 A B2607 -58.479 -72.636 -6.651 1.00 0.01 N
ATOM 15 C8 A B2607 -57.787 -71.527 -7.021 1.00 0.01 C
ATOM 16 N7 A B2607 -58.549 -70.566 -7.455 1.00 0.01 N
ATOM 17 C5 A B2607 -59.830 -71.102 -7.366 1.00 0.01 C
ATOM 18 C6 A B2607 -61.104 -70.613 -7.686 1.00 0.01 C
ATOM 19 N6 A B2607 -61.303 -69.392 -8.171 1.00 0.01 N
ATOM 20 N1 A B2607 -62.172 -71.384 -7.499 1.00 0.01 N
ATOM 21 C2 A B2607 -61.952 -72.571 -7.000 1.00 0.01 C
ATOM 22 N3 A B2607 -60.816 -73.139 -6.662 1.00 0.01 N
ATOM 23 C4 A B2607 -59.786 -72.358 -6.872 1.00 0.01 C
ATOM 24 P U B2608 -55.657 -77.827 -5.822 1.00 0.01 P
ATOM 25 OP1 U B2608 -54.616 -77.577 -4.828 1.00 0.01 O
ATOM 26 OP2 U B2608 -55.261 -78.146 -7.186 1.00 0.01 O
ATOM 27 O5' U B2608 -56.647 -78.920 -5.285 1.00 0.01 O
TER
Atoms:
C4: (-60.645,-76.014,-3.524)
N3: (-61.420,-77.065,-3.195)
OP1: (-54.616,-77.577,-4.828)
OP2: (-55.261,-78.146,-7.186)
C2: (-61.000,-78.302,-2.932)
C1': (-59.163,-79.834,-2.716)
C3': (-58.525,-80.918,-4.675)
O5': (-56.647,-78.920,-5.285)
O4': (-57.769,-79.803,-2.778)
C5': (-56.176,-80.000,-4.517)
P: (-55.657,-77.827,-5.822)
C4': (-57.303,-80.668,-3.822)
C2': (-59.638,-80.907,-3.662)
O2': (-59.658,-82.126,-2.940)
N1: (-59.675,-78.512,-3.050)
O4: (-61.188,-74.961,-3.729)
O2: (-61.775,-79.145,-2.623)
C6: (-58.830,-77.496,-3.361)
C5: (-59.261,-76.268,-3.611)
O3': (-58.437,-82.129,-5.386)
N3: (-61.420,-77.065,-3.195)
OP1: (-54.616,-77.577,-4.828)
OP2: (-55.261,-78.146,-7.186)
C2: (-61.000,-78.302,-2.932)
C1': (-59.163,-79.834,-2.716)
C3': (-58.525,-80.918,-4.675)
O5': (-56.647,-78.920,-5.285)
O4': (-57.769,-79.803,-2.778)
C5': (-56.176,-80.000,-4.517)
P: (-55.657,-77.827,-5.822)
C4': (-57.303,-80.668,-3.822)
C2': (-59.638,-80.907,-3.662)
O2': (-59.658,-82.126,-2.940)
N1: (-59.675,-78.512,-3.050)
O4: (-61.188,-74.961,-3.729)
O2: (-61.775,-79.145,-2.623)
C6: (-58.830,-77.496,-3.361)
C5: (-59.261,-76.268,-3.611)
O3': (-58.437,-82.129,-5.386)
OP1: (-52.801,-73.153,-7.041)
OP2: (-53.902,-70.931,-7.511)
C3': (-56.030,-75.291,-6.245)
C1': (-57.925,-73.883,-6.155)
C5': (-54.774,-73.534,-4.924)
O4': (-57.148,-73.584,-5.045)
C8: (-57.787,-71.527,-7.021)
O2': (-57.730,-75.450,-7.982)
C6: (-61.104,-70.613,-7.686)
C5: (-59.830,-71.102,-7.366)
C4: (-59.786,-72.358,-6.872)
P: (-53.570,-72.002,-6.569)
C4': (-55.971,-74.414,-5.019)
C2': (-57.005,-74.578,-7.149)
C2: (-61.952,-72.571,-7.000)
N1: (-62.172,-71.384,-7.499)
N3: (-60.816,-73.139,-6.662)
N6: (-61.303,-69.392,-8.171)
N7: (-58.549,-70.566,-7.455)
N9: (-58.479,-72.636,-6.651)
O5': (-54.853,-72.486,-5.845)
O3': (-56.575,-76.535,-5.886)
OP2: (-53.902,-70.931,-7.511)
C3': (-56.030,-75.291,-6.245)
C1': (-57.925,-73.883,-6.155)
C5': (-54.774,-73.534,-4.924)
O4': (-57.148,-73.584,-5.045)
C8: (-57.787,-71.527,-7.021)
O2': (-57.730,-75.450,-7.982)
C6: (-61.104,-70.613,-7.686)
C5: (-59.830,-71.102,-7.366)
C4: (-59.786,-72.358,-6.872)
P: (-53.570,-72.002,-6.569)
C4': (-55.971,-74.414,-5.019)
C2': (-57.005,-74.578,-7.149)
C2: (-61.952,-72.571,-7.000)
N1: (-62.172,-71.384,-7.499)
N3: (-60.816,-73.139,-6.662)
N6: (-61.303,-69.392,-8.171)
N7: (-58.549,-70.566,-7.455)
N9: (-58.479,-72.636,-6.651)
O5': (-54.853,-72.486,-5.845)
O3': (-56.575,-76.535,-5.886)
Image (generated by PyMOL):