ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8S:A463:A787

Extra

PDB:
ATOM 1 O3' G A 462 -43.926 -54.668 26.731 1.00 1.36 O
ATOM 2 P U A 463 -42.528 -54.000 26.307 1.00 0.01 P
ATOM 3 OP1 U A 463 -42.816 -52.860 25.407 1.00 0.01 O
ATOM 4 OP2 U A 463 -41.655 -55.070 25.830 1.00 0.01 O
ATOM 5 O5' U A 463 -41.993 -53.480 27.676 1.00 0.01 O
ATOM 6 C5' U A 463 -40.626 -53.169 27.840 1.00 0.01 C
ATOM 7 C4' U A 463 -40.442 -52.124 28.894 1.00 0.01 C
ATOM 8 O4' U A 463 -41.143 -50.928 28.512 1.00 0.01 O
ATOM 9 C3' U A 463 -40.999 -52.477 30.240 1.00 0.01 C
ATOM 10 O3' U A 463 -40.087 -53.248 30.983 1.00 0.01 O
ATOM 11 C2' U A 463 -41.276 -51.127 30.851 1.00 0.01 C
ATOM 12 O2' U A 463 -40.086 -50.605 31.411 1.00 0.01 O
ATOM 13 C1' U A 463 -41.654 -50.290 29.630 1.00 0.01 C
ATOM 14 N1 U A 463 -43.084 -50.163 29.443 1.00 0.01 N
ATOM 15 C2 U A 463 -43.782 -49.457 30.353 1.00 0.01 C
ATOM 16 O2 U A 463 -43.236 -48.980 31.330 1.00 0.01 O
ATOM 17 N3 U A 463 -45.124 -49.368 30.090 1.00 0.01 N
ATOM 18 C4 U A 463 -45.795 -49.898 29.017 1.00 0.01 C
ATOM 19 O4 U A 463 -47.009 -49.753 28.907 1.00 0.01 O
ATOM 20 C5 U A 463 -44.973 -50.585 28.104 1.00 0.01 C
ATOM 21 C6 U A 463 -43.677 -50.670 28.343 1.00 0.01 C
ATOM 22 P G A 464 -40.607 -54.408 31.930 1.00 0.01 P
ATOM 23 OP1 G A 464 -39.437 -54.920 32.643 1.00 0.01 O
ATOM 24 OP2 G A 464 -41.385 -55.331 31.110 1.00 0.01 O
ATOM 25 O5' G A 464 -41.569 -53.620 32.919 1.00 0.01 O
TER

ATOM 1 O3' C B 786 -50.099 -44.399 25.746 1.00 0.01 O
ATOM 2 P A B 787 -50.626 -45.869 25.938 1.00 0.01 P
ATOM 3 OP1 A B 787 -51.872 -46.001 25.219 1.00 0.01 O
ATOM 4 OP2 A B 787 -50.609 -46.140 27.359 1.00 0.01 O
ATOM 5 O5' A B 787 -49.528 -46.683 25.214 1.00 0.01 O
ATOM 6 C5' A B 787 -49.190 -46.340 23.897 1.00 0.01 C
ATOM 7 C4' A B 787 -48.289 -47.346 23.299 1.00 0.01 C
ATOM 8 O4' A B 787 -46.955 -47.081 23.775 1.00 0.01 O
ATOM 9 C3' A B 787 -48.609 -48.757 23.711 1.00 0.01 C
ATOM 10 O3' A B 787 -48.104 -49.650 22.741 1.00 0.01 O
ATOM 11 C2' A B 787 -47.816 -48.888 24.987 1.00 0.01 C
ATOM 12 O2' A B 787 -47.539 -50.206 25.363 1.00 0.01 O
ATOM 13 C1' A B 787 -46.550 -48.117 24.636 1.00 0.01 C
ATOM 14 N9 A B 787 -45.890 -47.519 25.796 1.00 0.01 N
ATOM 15 C8 A B 787 -46.506 -46.714 26.708 1.00 0.01 C
ATOM 16 N7 A B 787 -45.724 -46.345 27.677 1.00 0.01 N
ATOM 17 C5 A B 787 -44.508 -46.953 27.386 1.00 0.01 C
ATOM 18 C6 A B 787 -43.280 -46.949 28.056 1.00 0.01 C
ATOM 19 N6 A B 787 -43.051 -46.281 29.196 1.00 0.01 N
ATOM 20 N1 A B 787 -42.297 -47.666 27.505 1.00 0.01 N
ATOM 21 C2 A B 787 -42.533 -48.337 26.393 1.00 0.01 C
ATOM 22 N3 A B 787 -43.630 -48.422 25.690 1.00 0.01 N
ATOM 23 C4 A B 787 -44.593 -47.690 26.234 1.00 0.01 C
ATOM 24 P A B 788 -49.035 -50.775 22.086 1.00 0.01 P
ATOM 25 OP1 A B 788 -50.412 -50.276 22.069 1.00 0.01 O
ATOM 26 OP2 A B 788 -48.756 -52.025 22.800 1.00 0.01 O
ATOM 27 O5' A B 788 -48.464 -50.862 20.619 1.00 0.01 O
TER

Atoms:
C4: (-45.795,-49.898,29.017)
N3: (-45.124,-49.368,30.090)
OP1: (-42.816,-52.860,25.407)
OP2: (-41.655,-55.070,25.830)
C2: (-43.782,-49.457,30.353)
C1': (-41.654,-50.290,29.630)
C3': (-40.999,-52.477,30.240)
O5': (-41.993,-53.480,27.676)
O4': (-41.143,-50.928,28.512)
C5': (-40.626,-53.169,27.840)
P: (-42.528,-54.000,26.307)
C4': (-40.442,-52.124,28.894)
C2': (-41.276,-51.127,30.851)
O2': (-40.086,-50.605,31.411)
N1: (-43.084,-50.163,29.443)
O4: (-47.009,-49.753,28.907)
O2: (-43.236,-48.980,31.330)
C6: (-43.677,-50.670,28.343)
C5: (-44.973,-50.585,28.104)
O3': (-40.087,-53.248,30.983)
OP1: (-51.872,-46.001,25.219)
OP2: (-50.609,-46.140,27.359)
C3': (-48.609,-48.757,23.711)
C1': (-46.550,-48.117,24.636)
C5': (-49.190,-46.340,23.897)
O4': (-46.955,-47.081,23.775)
C8: (-46.506,-46.714,26.708)
O2': (-47.539,-50.206,25.363)
C6: (-43.280,-46.949,28.056)
C5: (-44.508,-46.953,27.386)
C4: (-44.593,-47.690,26.234)
P: (-50.626,-45.869,25.938)
C4': (-48.289,-47.346,23.299)
C2': (-47.816,-48.888,24.987)
C2: (-42.533,-48.337,26.393)
N1: (-42.297,-47.666,27.505)
N3: (-43.630,-48.422,25.690)
N6: (-43.051,-46.281,29.196)
N7: (-45.724,-46.345,27.677)
N9: (-45.890,-47.519,25.796)
O5': (-49.528,-46.683,25.214)
O3': (-48.104,-49.650,22.741)
Image (generated by PyMOL):
PyMOL image
show in jmol