Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2828:A2827
Extra
PDB:
ATOM 1 O3' A A2827 -13.516 76.644 202.309 1.00 15.20 O
ATOM 2 P U A2828 -14.961 77.344 202.266 1.00 11.49 P
ATOM 3 OP1 U A2828 -15.787 76.730 203.354 1.00 11.49 O
ATOM 4 OP2 U A2828 -15.449 77.248 200.858 1.00 11.49 O
ATOM 5 O5' U A2828 -14.629 78.870 202.616 1.00 11.49 O
ATOM 6 C5' U A2828 -15.485 79.923 202.162 1.00 11.49 C
ATOM 7 C4' U A2828 -14.766 81.256 202.058 1.00 11.49 C
ATOM 8 O4' U A2828 -14.213 81.617 203.343 1.00 11.49 O
ATOM 9 C3' U A2828 -13.578 81.315 201.111 1.00 11.49 C
ATOM 10 O3' U A2828 -13.951 81.522 199.761 1.00 11.49 O
ATOM 11 C2' U A2828 -12.771 82.456 201.685 1.00 11.49 C
ATOM 12 O2' U A2828 -13.340 83.698 201.340 1.00 11.49 O
ATOM 13 C1' U A2828 -12.967 82.235 203.170 1.00 11.49 C
ATOM 14 N1 U A2828 -11.943 81.349 203.698 1.00 11.52 N
ATOM 15 C2 U A2828 -10.669 81.897 203.798 1.00 11.52 C
ATOM 16 O2 U A2828 -10.392 83.072 203.500 1.00 11.52 O
ATOM 17 N3 U A2828 -9.742 81.005 204.268 1.00 11.52 N
ATOM 18 C4 U A2828 -9.971 79.697 204.609 1.00 11.52 C
ATOM 19 O4 U A2828 -9.020 79.063 205.031 1.00 11.52 O
ATOM 20 C5 U A2828 -11.306 79.209 204.453 1.00 11.52 C
ATOM 21 C6 U A2828 -12.235 80.044 204.002 1.00 11.52 C
ATOM 22 P A A2829 -13.303 80.634 198.579 1.00 2.16 P
ATOM 23 OP1 A A2829 -14.329 80.535 197.518 1.00 2.16 O
ATOM 24 OP2 A A2829 -12.788 79.375 199.200 1.00 2.16 O
ATOM 25 O5' A A2829 -12.090 81.528 198.084 1.00 2.16 O
TER
ATOM 1 O3' G B2826 -13.493 76.041 208.924 1.00 18.45 O
ATOM 2 P A B2827 -13.592 74.638 208.118 1.00 15.20 P
ATOM 3 OP1 A B2827 -15.048 74.377 207.886 1.00 15.20 O
ATOM 4 OP2 A B2827 -12.777 73.623 208.849 1.00 15.20 O
ATOM 5 O5' A B2827 -12.883 74.979 206.744 1.00 15.20 O
ATOM 6 C5' A B2827 -13.577 74.839 205.515 1.00 15.20 C
ATOM 7 C4' A B2827 -13.089 75.834 204.510 1.00 15.20 C
ATOM 8 O4' A B2827 -11.659 75.961 204.649 1.00 15.20 O
ATOM 9 C3' A B2827 -13.336 75.459 203.070 1.00 15.20 C
ATOM 10 O3' A B2827 -13.516 76.644 202.309 1.00 15.20 O
ATOM 11 C2' A B2827 -12.040 74.768 202.675 1.00 15.20 C
ATOM 12 O2' A B2827 -11.753 74.826 201.307 1.00 15.20 O
ATOM 13 C1' A B2827 -11.016 75.540 203.468 1.00 15.20 C
ATOM 14 N9 A B2827 -9.868 74.754 203.865 1.00 14.96 N
ATOM 15 C8 A B2827 -9.867 73.503 204.404 1.00 14.96 C
ATOM 16 N7 A B2827 -8.655 73.093 204.712 1.00 14.96 N
ATOM 17 C5 A B2827 -7.811 74.162 204.374 1.00 14.96 C
ATOM 18 C6 A B2827 -6.408 74.389 204.448 1.00 14.96 C
ATOM 19 N6 A B2827 -5.501 73.527 204.914 1.00 14.96 N
ATOM 20 N1 A B2827 -5.924 75.569 204.009 1.00 14.96 N
ATOM 21 C2 A B2827 -6.787 76.471 203.533 1.00 14.96 C
ATOM 22 N3 A B2827 -8.112 76.382 203.415 1.00 14.96 N
ATOM 23 C4 A B2827 -8.568 75.194 203.855 1.00 14.96 C
ATOM 24 P U B2828 -14.961 77.344 202.266 1.00 11.49 P
ATOM 25 OP1 U B2828 -15.787 76.730 203.354 1.00 11.49 O
ATOM 26 OP2 U B2828 -15.449 77.248 200.858 1.00 11.49 O
ATOM 27 O5' U B2828 -14.629 78.870 202.616 1.00 11.49 O
TER
ATOM 2 P U A2828 -14.961 77.344 202.266 1.00 11.49 P
ATOM 3 OP1 U A2828 -15.787 76.730 203.354 1.00 11.49 O
ATOM 4 OP2 U A2828 -15.449 77.248 200.858 1.00 11.49 O
ATOM 5 O5' U A2828 -14.629 78.870 202.616 1.00 11.49 O
ATOM 6 C5' U A2828 -15.485 79.923 202.162 1.00 11.49 C
ATOM 7 C4' U A2828 -14.766 81.256 202.058 1.00 11.49 C
ATOM 8 O4' U A2828 -14.213 81.617 203.343 1.00 11.49 O
ATOM 9 C3' U A2828 -13.578 81.315 201.111 1.00 11.49 C
ATOM 10 O3' U A2828 -13.951 81.522 199.761 1.00 11.49 O
ATOM 11 C2' U A2828 -12.771 82.456 201.685 1.00 11.49 C
ATOM 12 O2' U A2828 -13.340 83.698 201.340 1.00 11.49 O
ATOM 13 C1' U A2828 -12.967 82.235 203.170 1.00 11.49 C
ATOM 14 N1 U A2828 -11.943 81.349 203.698 1.00 11.52 N
ATOM 15 C2 U A2828 -10.669 81.897 203.798 1.00 11.52 C
ATOM 16 O2 U A2828 -10.392 83.072 203.500 1.00 11.52 O
ATOM 17 N3 U A2828 -9.742 81.005 204.268 1.00 11.52 N
ATOM 18 C4 U A2828 -9.971 79.697 204.609 1.00 11.52 C
ATOM 19 O4 U A2828 -9.020 79.063 205.031 1.00 11.52 O
ATOM 20 C5 U A2828 -11.306 79.209 204.453 1.00 11.52 C
ATOM 21 C6 U A2828 -12.235 80.044 204.002 1.00 11.52 C
ATOM 22 P A A2829 -13.303 80.634 198.579 1.00 2.16 P
ATOM 23 OP1 A A2829 -14.329 80.535 197.518 1.00 2.16 O
ATOM 24 OP2 A A2829 -12.788 79.375 199.200 1.00 2.16 O
ATOM 25 O5' A A2829 -12.090 81.528 198.084 1.00 2.16 O
TER
ATOM 1 O3' G B2826 -13.493 76.041 208.924 1.00 18.45 O
ATOM 2 P A B2827 -13.592 74.638 208.118 1.00 15.20 P
ATOM 3 OP1 A B2827 -15.048 74.377 207.886 1.00 15.20 O
ATOM 4 OP2 A B2827 -12.777 73.623 208.849 1.00 15.20 O
ATOM 5 O5' A B2827 -12.883 74.979 206.744 1.00 15.20 O
ATOM 6 C5' A B2827 -13.577 74.839 205.515 1.00 15.20 C
ATOM 7 C4' A B2827 -13.089 75.834 204.510 1.00 15.20 C
ATOM 8 O4' A B2827 -11.659 75.961 204.649 1.00 15.20 O
ATOM 9 C3' A B2827 -13.336 75.459 203.070 1.00 15.20 C
ATOM 10 O3' A B2827 -13.516 76.644 202.309 1.00 15.20 O
ATOM 11 C2' A B2827 -12.040 74.768 202.675 1.00 15.20 C
ATOM 12 O2' A B2827 -11.753 74.826 201.307 1.00 15.20 O
ATOM 13 C1' A B2827 -11.016 75.540 203.468 1.00 15.20 C
ATOM 14 N9 A B2827 -9.868 74.754 203.865 1.00 14.96 N
ATOM 15 C8 A B2827 -9.867 73.503 204.404 1.00 14.96 C
ATOM 16 N7 A B2827 -8.655 73.093 204.712 1.00 14.96 N
ATOM 17 C5 A B2827 -7.811 74.162 204.374 1.00 14.96 C
ATOM 18 C6 A B2827 -6.408 74.389 204.448 1.00 14.96 C
ATOM 19 N6 A B2827 -5.501 73.527 204.914 1.00 14.96 N
ATOM 20 N1 A B2827 -5.924 75.569 204.009 1.00 14.96 N
ATOM 21 C2 A B2827 -6.787 76.471 203.533 1.00 14.96 C
ATOM 22 N3 A B2827 -8.112 76.382 203.415 1.00 14.96 N
ATOM 23 C4 A B2827 -8.568 75.194 203.855 1.00 14.96 C
ATOM 24 P U B2828 -14.961 77.344 202.266 1.00 11.49 P
ATOM 25 OP1 U B2828 -15.787 76.730 203.354 1.00 11.49 O
ATOM 26 OP2 U B2828 -15.449 77.248 200.858 1.00 11.49 O
ATOM 27 O5' U B2828 -14.629 78.870 202.616 1.00 11.49 O
TER
Atoms:
C4: (-9.971,79.697,204.609)
N3: (-9.742,81.005,204.268)
OP1: (-15.787,76.730,203.354)
OP2: (-15.449,77.248,200.858)
C2: (-10.669,81.897,203.798)
C1': (-12.967,82.235,203.170)
C3': (-13.578,81.315,201.111)
O5': (-14.629,78.870,202.616)
O4': (-14.213,81.617,203.343)
C5': (-15.485,79.923,202.162)
P: (-14.961,77.344,202.266)
C4': (-14.766,81.256,202.058)
C2': (-12.771,82.456,201.685)
O2': (-13.340,83.698,201.340)
N1: (-11.943,81.349,203.698)
O4: (-9.020,79.063,205.031)
O2: (-10.392,83.072,203.500)
C6: (-12.235,80.044,204.002)
C5: (-11.306,79.209,204.453)
O3': (-13.951,81.522,199.761)
N3: (-9.742,81.005,204.268)
OP1: (-15.787,76.730,203.354)
OP2: (-15.449,77.248,200.858)
C2: (-10.669,81.897,203.798)
C1': (-12.967,82.235,203.170)
C3': (-13.578,81.315,201.111)
O5': (-14.629,78.870,202.616)
O4': (-14.213,81.617,203.343)
C5': (-15.485,79.923,202.162)
P: (-14.961,77.344,202.266)
C4': (-14.766,81.256,202.058)
C2': (-12.771,82.456,201.685)
O2': (-13.340,83.698,201.340)
N1: (-11.943,81.349,203.698)
O4: (-9.020,79.063,205.031)
O2: (-10.392,83.072,203.500)
C6: (-12.235,80.044,204.002)
C5: (-11.306,79.209,204.453)
O3': (-13.951,81.522,199.761)
OP1: (-15.048,74.377,207.886)
OP2: (-12.777,73.623,208.849)
C3': (-13.336,75.459,203.070)
C1': (-11.016,75.540,203.468)
C5': (-13.577,74.839,205.515)
O4': (-11.659,75.961,204.649)
C8: (-9.867,73.503,204.404)
O2': (-11.753,74.826,201.307)
C6: (-6.408,74.389,204.448)
C5: (-7.811,74.162,204.374)
C4: (-8.568,75.194,203.855)
P: (-13.592,74.638,208.118)
C4': (-13.089,75.834,204.510)
C2': (-12.040,74.768,202.675)
C2: (-6.787,76.471,203.533)
N1: (-5.924,75.569,204.009)
N3: (-8.112,76.382,203.415)
N6: (-5.501,73.527,204.914)
N7: (-8.655,73.093,204.712)
N9: (-9.868,74.754,203.865)
O5': (-12.883,74.979,206.744)
O3': (-13.516,76.644,202.309)
OP2: (-12.777,73.623,208.849)
C3': (-13.336,75.459,203.070)
C1': (-11.016,75.540,203.468)
C5': (-13.577,74.839,205.515)
O4': (-11.659,75.961,204.649)
C8: (-9.867,73.503,204.404)
O2': (-11.753,74.826,201.307)
C6: (-6.408,74.389,204.448)
C5: (-7.811,74.162,204.374)
C4: (-8.568,75.194,203.855)
P: (-13.592,74.638,208.118)
C4': (-13.089,75.834,204.510)
C2': (-12.040,74.768,202.675)
C2: (-6.787,76.471,203.533)
N1: (-5.924,75.569,204.009)
N3: (-8.112,76.382,203.415)
N6: (-5.501,73.527,204.914)
N7: (-8.655,73.093,204.712)
N9: (-9.868,74.754,203.865)
O5': (-12.883,74.979,206.744)
O3': (-13.516,76.644,202.309)
Image (generated by PyMOL):