ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3RW6:H40:H38

Extra

PDB:
ATOM 1 O3' A A 39 22.702 -14.379 7.051 1.00 56.26 O
ATOM 2 P U A 40 22.121 -12.897 6.940 1.00 55.66 P
ATOM 3 OP1 U A 40 23.246 -11.960 7.158 1.00 59.73 O
ATOM 4 OP2 U A 40 20.909 -12.818 7.793 1.00 49.34 O
ATOM 5 O5' U A 40 21.722 -12.806 5.402 1.00 49.02 O
ATOM 6 C5' U A 40 22.772 -12.764 4.452 1.00 49.84 C
ATOM 7 C4' U A 40 22.200 -12.900 3.058 1.00 47.72 C
ATOM 8 O4' U A 40 21.503 -14.167 2.963 1.00 47.33 O
ATOM 9 C3' U A 40 21.126 -11.879 2.730 1.00 49.04 C
ATOM 10 O3' U A 40 21.693 -10.626 2.352 1.00 48.58 O
ATOM 11 C2' U A 40 20.397 -12.594 1.591 1.00 47.48 C
ATOM 12 O2' U A 40 21.099 -12.585 0.358 1.00 48.60 O
ATOM 13 C1' U A 40 20.349 -14.009 2.163 1.00 45.46 C
ATOM 14 N1 U A 40 19.143 -14.304 3.003 1.00 42.64 N
ATOM 15 C2 U A 40 17.967 -14.582 2.340 1.00 44.54 C
ATOM 16 O2 U A 40 17.906 -14.574 1.117 1.00 45.93 O
ATOM 17 N3 U A 40 16.880 -14.868 3.140 1.00 37.49 N
ATOM 18 C4 U A 40 16.863 -14.889 4.521 1.00 41.38 C
ATOM 19 O4 U A 40 15.812 -15.156 5.103 1.00 40.16 O
ATOM 20 C5 U A 40 18.134 -14.583 5.145 1.00 44.81 C
ATOM 21 C6 U A 40 19.208 -14.308 4.381 1.00 43.04 C
ATOM 22 P C A 41 20.876 -9.280 2.645 1.00 49.31 P
ATOM 23 OP1 C A 41 21.825 -8.155 2.484 1.00 54.51 O
ATOM 24 OP2 C A 41 20.097 -9.450 3.893 1.00 40.57 O
ATOM 25 O5' C A 41 19.800 -9.230 1.465 1.00 47.09 O
TER

ATOM 1 O3' U B 37 13.478 -16.322 12.156 1.00 44.61 O
ATOM 2 P A B 38 13.201 -14.733 12.115 1.00 49.37 P
ATOM 3 OP1 A B 38 14.160 -14.129 13.071 1.00 44.27 O
ATOM 4 OP2 A B 38 11.736 -14.463 12.180 1.00 42.06 O
ATOM 5 O5' A B 38 13.756 -14.325 10.686 1.00 39.47 O
ATOM 6 C5' A B 38 15.138 -14.341 10.749 1.00 42.13 C
ATOM 7 C4' A B 38 15.833 -13.937 9.487 1.00 43.98 C
ATOM 8 O4' A B 38 15.883 -12.502 9.393 1.00 43.11 O
ATOM 9 C3' A B 38 17.257 -14.412 9.622 1.00 46.17 C
ATOM 10 O3' A B 38 17.406 -15.552 8.797 1.00 48.56 O
ATOM 11 C2' A B 38 18.123 -13.219 9.246 1.00 38.18 C
ATOM 12 O2' A B 38 18.403 -13.179 7.869 1.00 44.31 O
ATOM 13 C1' A B 38 17.205 -12.062 9.621 1.00 46.25 C
ATOM 14 N9 A B 38 17.290 -11.610 11.013 1.00 45.34 N
ATOM 15 C8 A B 38 16.428 -11.893 12.037 1.00 45.01 C
ATOM 16 N7 A B 38 16.746 -11.336 13.182 1.00 43.72 N
ATOM 17 C5 A B 38 17.904 -10.639 12.887 1.00 43.46 C
ATOM 18 C6 A B 38 18.743 -9.834 13.677 1.00 43.84 C
ATOM 19 N6 A B 38 18.530 -9.600 14.976 1.00 37.98 N
ATOM 20 N1 A B 38 19.811 -9.276 13.071 1.00 46.61 N
ATOM 21 C2 A B 38 20.019 -9.517 11.768 1.00 47.04 C
ATOM 22 N3 A B 38 19.303 -10.260 10.923 1.00 48.87 N
ATOM 23 C4 A B 38 18.249 -10.793 11.558 1.00 43.98 C
ATOM 24 P A B 39 18.579 -16.538 9.201 1.00 46.30 P
ATOM 25 OP1 A B 39 18.400 -17.762 8.380 1.00 50.26 O
ATOM 26 OP2 A B 39 18.629 -16.617 10.686 1.00 34.21 O
ATOM 27 O5' A B 39 19.860 -15.723 8.680 1.00 38.71 O
TER

Atoms:
C4: (16.863,-14.889,4.521)
N3: (16.880,-14.868,3.140)
OP1: (23.246,-11.960,7.158)
OP2: (20.909,-12.818,7.793)
C2: (17.967,-14.582,2.340)
C1': (20.349,-14.009,2.163)
C3': (21.126,-11.879,2.730)
O5': (21.722,-12.806,5.402)
O4': (21.503,-14.167,2.963)
C5': (22.772,-12.764,4.452)
P: (22.121,-12.897,6.940)
C4': (22.200,-12.900,3.058)
C2': (20.397,-12.594,1.591)
O2': (21.099,-12.585,0.358)
N1: (19.143,-14.304,3.003)
O4: (15.812,-15.156,5.103)
O2: (17.906,-14.574,1.117)
C6: (19.208,-14.308,4.381)
C5: (18.134,-14.583,5.145)
O3': (21.693,-10.626,2.352)
OP1: (14.160,-14.129,13.071)
OP2: (11.736,-14.463,12.180)
C3': (17.257,-14.412,9.622)
C1': (17.205,-12.062,9.621)
C5': (15.138,-14.341,10.749)
O4': (15.883,-12.502,9.393)
C8: (16.428,-11.893,12.037)
O2': (18.403,-13.179,7.869)
C6: (18.743,-9.834,13.677)
C5: (17.904,-10.639,12.887)
C4: (18.249,-10.793,11.558)
P: (13.201,-14.733,12.115)
C4': (15.833,-13.937,9.487)
C2': (18.123,-13.219,9.246)
C2: (20.019,-9.517,11.768)
N1: (19.811,-9.276,13.071)
N3: (19.303,-10.260,10.923)
N6: (18.530,-9.600,14.976)
N7: (16.746,-11.336,13.182)
N9: (17.290,-11.610,11.013)
O5': (13.756,-14.325,10.686)
O3': (17.406,-15.552,8.797)
Image (generated by PyMOL):
PyMOL image
show in jmol