Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21499:21497
Extra
PDB:
ATOM 1 O3' A A1498 -98.721 -69.486 46.949 1.00 83.09 O
ATOM 2 P U A1499 -97.981 -70.547 45.991 1.00 91.75 P
ATOM 3 OP1 U A1499 -97.469 -71.630 46.865 1.00 91.81 O
ATOM 4 OP2 U A1499 -97.030 -69.789 45.152 1.00 91.01 O
ATOM 5 O5' U A1499 -99.146 -71.118 45.080 1.00 92.51 O
ATOM 6 C5' U A1499 -99.822 -72.317 45.435 1.00 93.22 C
ATOM 7 C4' U A1499 -100.367 -73.034 44.231 1.00 93.68 C
ATOM 8 O4' U A1499 -101.397 -72.227 43.601 1.00 94.04 O
ATOM 9 C3' U A1499 -99.348 -73.373 43.139 1.00 93.16 C
ATOM 10 O3' U A1499 -99.510 -74.732 42.750 1.00 93.60 O
ATOM 11 C2' U A1499 -99.740 -72.443 41.980 1.00 93.11 C
ATOM 12 O2' U A1499 -99.452 -72.946 40.698 1.00 93.06 O
ATOM 13 C1' U A1499 -101.236 -72.281 42.204 1.00 93.93 C
ATOM 14 N1 U A1499 -101.803 -71.061 41.647 1.00 93.95 N
ATOM 15 C2 U A1499 -102.924 -71.165 40.889 1.00 94.64 C
ATOM 16 O2 U A1499 -103.407 -72.253 40.659 1.00 95.19 O
ATOM 17 N3 U A1499 -103.446 -69.980 40.418 1.00 94.68 N
ATOM 18 C4 U A1499 -102.935 -68.718 40.644 1.00 94.09 C
ATOM 19 O4 U A1499 -103.443 -67.699 40.175 1.00 94.19 O
ATOM 20 C5 U A1499 -101.778 -68.720 41.452 1.00 93.39 C
ATOM 21 C6 U A1499 -101.276 -69.858 41.922 1.00 93.36 C
ATOM 22 P C A1500 -98.730 -75.894 43.550 1.00 94.74 P
ATOM 23 OP1 C A1500 -99.549 -77.126 43.432 1.00 95.54 O
ATOM 24 OP2 C A1500 -98.421 -75.373 44.913 1.00 94.49 O
ATOM 25 O5' C A1500 -97.381 -76.051 42.704 1.00 94.02 O
TER
ATOM 1 O3' U B1496 -97.559 -63.287 37.418 1.00 97.36 O
ATOM 2 P A B1497 -98.614 -63.371 38.646 1.00 91.56 P
ATOM 3 OP1 A B1497 -99.985 -63.444 38.069 1.00 92.39 O
ATOM 4 OP2 A B1497 -98.288 -62.237 39.561 1.00 91.11 O
ATOM 5 O5' A B1497 -98.248 -64.761 39.349 1.00 91.58 O
ATOM 6 C5' A B1497 -99.176 -65.830 39.405 1.00 92.32 C
ATOM 7 C4' A B1497 -98.793 -66.825 40.467 1.00 92.28 C
ATOM 8 O4' A B1497 -97.511 -67.432 40.138 1.00 91.70 O
ATOM 9 C3' A B1497 -98.616 -66.241 41.855 1.00 92.03 C
ATOM 10 O3' A B1497 -99.833 -66.201 42.581 1.00 92.70 O
ATOM 11 C2' A B1497 -97.540 -67.128 42.482 1.00 91.62 C
ATOM 12 O2' A B1497 -98.104 -68.337 42.971 1.00 92.21 O
ATOM 13 C1' A B1497 -96.667 -67.455 41.267 1.00 91.22 C
ATOM 14 N9 A B1497 -95.590 -66.451 41.040 1.00 90.42 N
ATOM 15 C8 A B1497 -95.531 -65.154 41.475 1.00 90.10 C
ATOM 16 N7 A B1497 -94.488 -64.476 41.064 1.00 89.42 N
ATOM 17 C5 A B1497 -93.783 -65.366 40.285 1.00 89.26 C
ATOM 18 C6 A B1497 -92.586 -65.241 39.564 1.00 88.65 C
ATOM 19 N6 A B1497 -91.840 -64.127 39.521 1.00 88.04 N
ATOM 20 N1 A B1497 -92.154 -66.317 38.887 1.00 88.69 N
ATOM 21 C2 A B1497 -92.869 -67.426 38.934 1.00 89.29 C
ATOM 22 N3 A B1497 -94.018 -67.652 39.566 1.00 89.90 N
ATOM 23 C4 A B1497 -94.447 -66.576 40.247 1.00 89.87 C
ATOM 24 P A B1498 -100.092 -65.060 43.675 1.00 82.75 P
ATOM 25 OP1 A B1498 -101.548 -64.883 43.807 1.00 83.57 O
ATOM 26 OP2 A B1498 -99.283 -63.891 43.268 1.00 82.04 O
ATOM 27 O5' A B1498 -99.500 -65.733 45.003 1.00 82.56 O
TER
ATOM 2 P U A1499 -97.981 -70.547 45.991 1.00 91.75 P
ATOM 3 OP1 U A1499 -97.469 -71.630 46.865 1.00 91.81 O
ATOM 4 OP2 U A1499 -97.030 -69.789 45.152 1.00 91.01 O
ATOM 5 O5' U A1499 -99.146 -71.118 45.080 1.00 92.51 O
ATOM 6 C5' U A1499 -99.822 -72.317 45.435 1.00 93.22 C
ATOM 7 C4' U A1499 -100.367 -73.034 44.231 1.00 93.68 C
ATOM 8 O4' U A1499 -101.397 -72.227 43.601 1.00 94.04 O
ATOM 9 C3' U A1499 -99.348 -73.373 43.139 1.00 93.16 C
ATOM 10 O3' U A1499 -99.510 -74.732 42.750 1.00 93.60 O
ATOM 11 C2' U A1499 -99.740 -72.443 41.980 1.00 93.11 C
ATOM 12 O2' U A1499 -99.452 -72.946 40.698 1.00 93.06 O
ATOM 13 C1' U A1499 -101.236 -72.281 42.204 1.00 93.93 C
ATOM 14 N1 U A1499 -101.803 -71.061 41.647 1.00 93.95 N
ATOM 15 C2 U A1499 -102.924 -71.165 40.889 1.00 94.64 C
ATOM 16 O2 U A1499 -103.407 -72.253 40.659 1.00 95.19 O
ATOM 17 N3 U A1499 -103.446 -69.980 40.418 1.00 94.68 N
ATOM 18 C4 U A1499 -102.935 -68.718 40.644 1.00 94.09 C
ATOM 19 O4 U A1499 -103.443 -67.699 40.175 1.00 94.19 O
ATOM 20 C5 U A1499 -101.778 -68.720 41.452 1.00 93.39 C
ATOM 21 C6 U A1499 -101.276 -69.858 41.922 1.00 93.36 C
ATOM 22 P C A1500 -98.730 -75.894 43.550 1.00 94.74 P
ATOM 23 OP1 C A1500 -99.549 -77.126 43.432 1.00 95.54 O
ATOM 24 OP2 C A1500 -98.421 -75.373 44.913 1.00 94.49 O
ATOM 25 O5' C A1500 -97.381 -76.051 42.704 1.00 94.02 O
TER
ATOM 1 O3' U B1496 -97.559 -63.287 37.418 1.00 97.36 O
ATOM 2 P A B1497 -98.614 -63.371 38.646 1.00 91.56 P
ATOM 3 OP1 A B1497 -99.985 -63.444 38.069 1.00 92.39 O
ATOM 4 OP2 A B1497 -98.288 -62.237 39.561 1.00 91.11 O
ATOM 5 O5' A B1497 -98.248 -64.761 39.349 1.00 91.58 O
ATOM 6 C5' A B1497 -99.176 -65.830 39.405 1.00 92.32 C
ATOM 7 C4' A B1497 -98.793 -66.825 40.467 1.00 92.28 C
ATOM 8 O4' A B1497 -97.511 -67.432 40.138 1.00 91.70 O
ATOM 9 C3' A B1497 -98.616 -66.241 41.855 1.00 92.03 C
ATOM 10 O3' A B1497 -99.833 -66.201 42.581 1.00 92.70 O
ATOM 11 C2' A B1497 -97.540 -67.128 42.482 1.00 91.62 C
ATOM 12 O2' A B1497 -98.104 -68.337 42.971 1.00 92.21 O
ATOM 13 C1' A B1497 -96.667 -67.455 41.267 1.00 91.22 C
ATOM 14 N9 A B1497 -95.590 -66.451 41.040 1.00 90.42 N
ATOM 15 C8 A B1497 -95.531 -65.154 41.475 1.00 90.10 C
ATOM 16 N7 A B1497 -94.488 -64.476 41.064 1.00 89.42 N
ATOM 17 C5 A B1497 -93.783 -65.366 40.285 1.00 89.26 C
ATOM 18 C6 A B1497 -92.586 -65.241 39.564 1.00 88.65 C
ATOM 19 N6 A B1497 -91.840 -64.127 39.521 1.00 88.04 N
ATOM 20 N1 A B1497 -92.154 -66.317 38.887 1.00 88.69 N
ATOM 21 C2 A B1497 -92.869 -67.426 38.934 1.00 89.29 C
ATOM 22 N3 A B1497 -94.018 -67.652 39.566 1.00 89.90 N
ATOM 23 C4 A B1497 -94.447 -66.576 40.247 1.00 89.87 C
ATOM 24 P A B1498 -100.092 -65.060 43.675 1.00 82.75 P
ATOM 25 OP1 A B1498 -101.548 -64.883 43.807 1.00 83.57 O
ATOM 26 OP2 A B1498 -99.283 -63.891 43.268 1.00 82.04 O
ATOM 27 O5' A B1498 -99.500 -65.733 45.003 1.00 82.56 O
TER
Atoms:
C4: (-102.935,-68.718,40.644)
N3: (-103.446,-69.980,40.418)
OP1: (-97.469,-71.630,46.865)
OP2: (-97.030,-69.789,45.152)
C2: (-102.924,-71.165,40.889)
C1': (-101.236,-72.281,42.204)
C3': (-99.348,-73.373,43.139)
O5': (-99.146,-71.118,45.080)
O4': (-101.397,-72.227,43.601)
C5': (-99.822,-72.317,45.435)
P: (-97.981,-70.547,45.991)
C4': (-100.367,-73.034,44.231)
C2': (-99.740,-72.443,41.980)
O2': (-99.452,-72.946,40.698)
N1: (-101.803,-71.061,41.647)
O4: (-103.443,-67.699,40.175)
O2: (-103.407,-72.253,40.659)
C6: (-101.276,-69.858,41.922)
C5: (-101.778,-68.720,41.452)
O3': (-99.510,-74.732,42.750)
N3: (-103.446,-69.980,40.418)
OP1: (-97.469,-71.630,46.865)
OP2: (-97.030,-69.789,45.152)
C2: (-102.924,-71.165,40.889)
C1': (-101.236,-72.281,42.204)
C3': (-99.348,-73.373,43.139)
O5': (-99.146,-71.118,45.080)
O4': (-101.397,-72.227,43.601)
C5': (-99.822,-72.317,45.435)
P: (-97.981,-70.547,45.991)
C4': (-100.367,-73.034,44.231)
C2': (-99.740,-72.443,41.980)
O2': (-99.452,-72.946,40.698)
N1: (-101.803,-71.061,41.647)
O4: (-103.443,-67.699,40.175)
O2: (-103.407,-72.253,40.659)
C6: (-101.276,-69.858,41.922)
C5: (-101.778,-68.720,41.452)
O3': (-99.510,-74.732,42.750)
OP1: (-99.985,-63.444,38.069)
OP2: (-98.288,-62.237,39.561)
C3': (-98.616,-66.241,41.855)
C1': (-96.667,-67.455,41.267)
C5': (-99.176,-65.830,39.405)
O4': (-97.511,-67.432,40.138)
C8: (-95.531,-65.154,41.475)
O2': (-98.104,-68.337,42.971)
C6: (-92.586,-65.241,39.564)
C5: (-93.783,-65.366,40.285)
C4: (-94.447,-66.576,40.247)
P: (-98.614,-63.371,38.646)
C4': (-98.793,-66.825,40.467)
C2': (-97.540,-67.128,42.482)
C2: (-92.869,-67.426,38.934)
N1: (-92.154,-66.317,38.887)
N3: (-94.018,-67.652,39.566)
N6: (-91.840,-64.127,39.521)
N7: (-94.488,-64.476,41.064)
N9: (-95.590,-66.451,41.040)
O5': (-98.248,-64.761,39.349)
O3': (-99.833,-66.201,42.581)
OP2: (-98.288,-62.237,39.561)
C3': (-98.616,-66.241,41.855)
C1': (-96.667,-67.455,41.267)
C5': (-99.176,-65.830,39.405)
O4': (-97.511,-67.432,40.138)
C8: (-95.531,-65.154,41.475)
O2': (-98.104,-68.337,42.971)
C6: (-92.586,-65.241,39.564)
C5: (-93.783,-65.366,40.285)
C4: (-94.447,-66.576,40.247)
P: (-98.614,-63.371,38.646)
C4': (-98.793,-66.825,40.467)
C2': (-97.540,-67.128,42.482)
C2: (-92.869,-67.426,38.934)
N1: (-92.154,-66.317,38.887)
N3: (-94.018,-67.652,39.566)
N6: (-91.840,-64.127,39.521)
N7: (-94.488,-64.476,41.064)
N9: (-95.590,-66.451,41.040)
O5': (-98.248,-64.761,39.349)
O3': (-99.833,-66.201,42.581)
Image (generated by PyMOL):