ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:2947:2945

Extra

PDB:
ATOM 1 O3' U A 946 -66.878 35.996 116.764 1.00 76.01 O
ATOM 2 P U A 947 -65.460 36.445 116.150 1.00 71.11 P
ATOM 3 OP1 U A 947 -65.385 37.920 116.239 1.00 71.21 O
ATOM 4 OP2 U A 947 -65.353 35.816 114.830 1.00 70.18 O
ATOM 5 O5' U A 947 -64.413 35.798 117.143 1.00 71.17 O
ATOM 6 C5' U A 947 -63.818 34.559 116.844 1.00 70.64 C
ATOM 7 C4' U A 947 -63.006 34.036 117.995 1.00 71.00 C
ATOM 8 O4' U A 947 -63.607 34.420 119.242 1.00 72.17 O
ATOM 9 C3' U A 947 -62.874 32.526 118.053 1.00 70.99 C
ATOM 10 O3' U A 947 -61.768 32.080 117.285 1.00 69.94 O
ATOM 11 C2' U A 947 -62.764 32.209 119.545 1.00 71.99 C
ATOM 12 O2' U A 947 -61.412 32.080 119.932 1.00 71.62 O
ATOM 13 C1' U A 947 -63.358 33.449 120.218 1.00 72.75 C
ATOM 14 N1 U A 947 -64.619 33.166 120.957 1.00 73.95 N
ATOM 15 C2 U A 947 -65.662 32.474 120.387 1.00 74.09 C
ATOM 16 O2 U A 947 -65.686 32.060 119.241 1.00 73.29 O
ATOM 17 N3 U A 947 -66.732 32.304 121.222 1.00 75.30 N
ATOM 18 C4 U A 947 -66.878 32.731 122.528 1.00 76.36 C
ATOM 19 O4 U A 947 -67.922 32.477 123.133 1.00 77.42 O
ATOM 20 C5 U A 947 -65.759 33.436 123.066 1.00 76.15 C
ATOM 21 C6 U A 947 -64.713 33.600 122.263 1.00 74.98 C
ATOM 22 P A A 948 -61.431 30.523 117.130 1.00 62.71 P
ATOM 23 OP1 A A 948 -61.360 29.943 118.510 1.00 63.66 O
ATOM 24 OP2 A A 948 -60.229 30.426 116.242 1.00 61.56 O
ATOM 25 O5' A A 948 -62.708 29.955 116.383 1.00 62.86 O
TER

ATOM 1 O3' C B 944 -65.693 36.380 129.319 1.00 85.19 O
ATOM 2 P A B 945 -66.765 37.444 128.762 1.00 77.99 P
ATOM 3 OP1 A B 945 -66.068 38.734 128.606 1.00 77.54 O
ATOM 4 OP2 A B 945 -67.953 37.379 129.646 1.00 79.45 O
ATOM 5 O5' A B 945 -67.132 36.866 127.341 1.00 76.94 O
ATOM 6 C5' A B 945 -66.307 37.105 126.213 1.00 75.54 C
ATOM 7 C4' A B 945 -66.879 36.452 124.987 1.00 74.82 C
ATOM 8 O4' A B 945 -67.465 35.179 125.376 1.00 75.44 O
ATOM 9 C3' A B 945 -67.996 37.232 124.322 1.00 74.96 C
ATOM 10 O3' A B 945 -67.981 36.986 122.923 1.00 73.84 O
ATOM 11 C2' A B 945 -69.249 36.633 124.949 1.00 76.17 C
ATOM 12 O2' A B 945 -70.421 36.784 124.185 1.00 76.28 O
ATOM 13 C1' A B 945 -68.850 35.175 125.101 1.00 76.01 C
ATOM 14 N9 A B 945 -69.520 34.506 126.207 1.00 77.31 N
ATOM 15 C8 A B 945 -69.422 34.860 127.521 1.00 78.37 C
ATOM 16 N7 A B 945 -70.124 34.108 128.334 1.00 79.49 N
ATOM 17 C5 A B 945 -70.718 33.181 127.489 1.00 79.12 C
ATOM 18 C6 A B 945 -71.597 32.113 127.750 1.00 79.91 C
ATOM 19 N6 A B 945 -72.011 31.819 128.986 1.00 81.26 N
ATOM 20 N1 A B 945 -72.033 31.366 126.695 1.00 79.30 N
ATOM 21 C2 A B 945 -71.593 31.688 125.459 1.00 77.98 C
ATOM 22 N3 A B 945 -70.765 32.676 125.096 1.00 77.15 N
ATOM 23 C4 A B 945 -70.356 33.403 126.169 1.00 77.78 C
ATOM 24 P U B 946 -67.802 38.216 121.921 1.00 80.30 P
ATOM 25 OP1 U B 946 -66.617 38.970 122.374 1.00 80.02 O
ATOM 26 OP2 U B 946 -69.104 38.911 121.850 1.00 81.07 O
ATOM 27 O5' U B 946 -67.499 37.514 120.540 1.00 79.06 O
TER

Atoms:
C4: (-66.878,32.731,122.528)
N3: (-66.732,32.304,121.222)
OP1: (-65.385,37.920,116.239)
OP2: (-65.353,35.816,114.830)
C2: (-65.662,32.474,120.387)
C1': (-63.358,33.449,120.218)
C3': (-62.874,32.526,118.053)
O5': (-64.413,35.798,117.143)
O4': (-63.607,34.420,119.242)
C5': (-63.818,34.559,116.844)
P: (-65.460,36.445,116.150)
C4': (-63.006,34.036,117.995)
C2': (-62.764,32.209,119.545)
O2': (-61.412,32.080,119.932)
N1: (-64.619,33.166,120.957)
O4: (-67.922,32.477,123.133)
O2: (-65.686,32.060,119.241)
C6: (-64.713,33.600,122.263)
C5: (-65.759,33.436,123.066)
O3': (-61.768,32.080,117.285)
OP1: (-66.068,38.734,128.606)
OP2: (-67.953,37.379,129.646)
C3': (-67.996,37.232,124.322)
C1': (-68.850,35.175,125.101)
C5': (-66.307,37.105,126.213)
O4': (-67.465,35.179,125.376)
C8: (-69.422,34.860,127.521)
O2': (-70.421,36.784,124.185)
C6: (-71.597,32.113,127.750)
C5: (-70.718,33.181,127.489)
C4: (-70.356,33.403,126.169)
P: (-66.765,37.444,128.762)
C4': (-66.879,36.452,124.987)
C2': (-69.249,36.633,124.949)
C2: (-71.593,31.688,125.459)
N1: (-72.033,31.366,126.695)
N3: (-70.765,32.676,125.096)
N6: (-72.011,31.819,128.986)
N7: (-70.124,34.108,128.334)
N9: (-69.520,34.506,126.207)
O5': (-67.132,36.866,127.341)
O3': (-67.981,36.986,122.923)
Image (generated by PyMOL):
PyMOL image
show in jmol