ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:11374:11372

Extra

PDB:
ATOM 1 O3' G A1373 70.409 -10.246 81.822 1.00 33.83 O
ATOM 2 P U A1374 70.494 -10.556 80.269 1.00 31.10 P
ATOM 3 OP1 U A1374 69.654 -9.700 79.621 1.00 30.90 O
ATOM 4 OP2 U A1374 70.270 -12.018 80.083 1.00 31.08 O
ATOM 5 O5' U A1374 71.991 -10.157 79.903 1.00 31.26 O
ATOM 6 C5' U A1374 72.341 -8.812 79.715 1.00 31.28 C
ATOM 7 C4' U A1374 73.156 -8.611 78.476 1.00 31.26 C
ATOM 8 O4' U A1374 74.225 -9.544 78.442 1.00 31.43 O
ATOM 9 C3' U A1374 72.473 -8.842 77.158 1.00 31.03 C
ATOM 10 O3' U A1374 71.630 -7.768 76.793 1.00 30.87 O
ATOM 11 C2' U A1374 73.664 -8.989 76.231 1.00 31.12 C
ATOM 12 O2' U A1374 74.202 -7.704 75.952 1.00 31.17 O
ATOM 13 C1' U A1374 74.651 -9.720 77.124 1.00 31.36 C
ATOM 14 N1 U A1374 74.722 -11.140 76.859 1.00 31.37 N
ATOM 15 C2 U A1374 75.465 -11.587 75.819 1.00 31.41 C
ATOM 16 O2 U A1374 76.043 -10.843 75.038 1.00 31.41 O
ATOM 17 N3 U A1374 75.492 -12.951 75.749 1.00 31.45 N
ATOM 18 C4 U A1374 74.891 -13.845 76.609 1.00 31.46 C
ATOM 19 O4 U A1374 74.982 -15.054 76.440 1.00 31.51 O
ATOM 20 C5 U A1374 74.196 -13.263 77.673 1.00 31.43 C
ATOM 21 C6 U A1374 74.154 -11.964 77.751 1.00 31.39 C
ATOM 22 P G A1375 70.602 -7.933 75.601 1.00 30.32 P
ATOM 23 OP1 G A1375 69.280 -7.555 76.158 1.00 30.20 O
ATOM 24 OP2 G A1375 70.779 -9.295 75.040 1.00 30.31 O
ATOM 25 O5' G A1375 71.096 -6.879 74.551 1.00 30.31 O
TER

ATOM 1 O3' U B1371 77.162 -19.410 82.810 1.00 34.06 O
ATOM 2 P A B1372 75.836 -19.228 81.953 1.00 37.97 P
ATOM 3 OP1 A B1372 74.799 -20.120 82.533 1.00 37.94 O
ATOM 4 OP2 A B1372 76.188 -19.403 80.566 1.00 37.88 O
ATOM 5 O5' A B1372 75.455 -17.723 82.215 1.00 37.84 O
ATOM 6 C5' A B1372 74.692 -17.358 83.340 1.00 37.84 C
ATOM 7 C4' A B1372 74.707 -15.874 83.531 1.00 37.79 C
ATOM 8 O4' A B1372 75.840 -15.296 82.810 1.00 37.85 O
ATOM 9 C3' A B1372 73.495 -15.145 83.025 1.00 37.49 C
ATOM 10 O3' A B1372 73.289 -14.046 83.848 1.00 37.52 O
ATOM 11 C2' A B1372 73.941 -14.639 81.662 1.00 37.36 C
ATOM 12 O2' A B1372 73.205 -13.530 81.189 1.00 37.15 O
ATOM 13 C1' A B1372 75.383 -14.281 81.935 1.00 37.61 C
ATOM 14 N9 A B1372 76.248 -14.264 80.735 1.00 37.61 N
ATOM 15 C8 A B1372 76.799 -15.355 80.078 1.00 37.67 C
ATOM 16 N7 A B1372 77.534 -15.042 79.031 1.00 37.67 N
ATOM 17 C5 A B1372 77.499 -13.676 78.994 1.00 37.60 C
ATOM 18 C6 A B1372 78.057 -12.795 78.111 1.00 37.57 C
ATOM 19 N6 A B1372 78.778 -13.175 77.097 1.00 37.60 N
ATOM 20 N1 A B1372 77.836 -11.493 78.274 1.00 37.51 N
ATOM 21 C2 A B1372 77.080 -11.151 79.313 1.00 37.48 C
ATOM 22 N3 A B1372 76.479 -11.894 80.241 1.00 37.51 N
ATOM 23 C4 A B1372 76.731 -13.177 80.021 1.00 37.56 C
ATOM 24 P G B1373 72.563 -14.203 85.249 1.00 34.71 P
ATOM 25 OP1 G B1373 73.509 -13.787 86.294 1.00 35.00 O
ATOM 26 OP2 G B1373 71.983 -15.555 85.330 1.00 34.69 O
ATOM 27 O5' G B1373 71.434 -13.154 85.082 1.00 34.48 O
TER

Atoms:
C4: (74.891,-13.845,76.609)
N3: (75.492,-12.951,75.749)
OP1: (69.654,-9.700,79.621)
OP2: (70.270,-12.018,80.083)
C2: (75.465,-11.587,75.819)
C1': (74.651,-9.720,77.124)
C3': (72.473,-8.842,77.158)
O5': (71.991,-10.157,79.903)
O4': (74.225,-9.544,78.442)
C5': (72.341,-8.812,79.715)
P: (70.494,-10.556,80.269)
C4': (73.156,-8.611,78.476)
C2': (73.664,-8.989,76.231)
O2': (74.202,-7.704,75.952)
N1: (74.722,-11.140,76.859)
O4: (74.982,-15.054,76.440)
O2: (76.043,-10.843,75.038)
C6: (74.154,-11.964,77.751)
C5: (74.196,-13.263,77.673)
O3': (71.630,-7.768,76.793)
OP1: (74.799,-20.120,82.533)
OP2: (76.188,-19.403,80.566)
C3': (73.495,-15.145,83.025)
C1': (75.383,-14.281,81.935)
C5': (74.692,-17.358,83.340)
O4': (75.840,-15.296,82.810)
C8: (76.799,-15.355,80.078)
O2': (73.205,-13.530,81.189)
C6: (78.057,-12.795,78.111)
C5: (77.499,-13.676,78.994)
C4: (76.731,-13.177,80.021)
P: (75.836,-19.228,81.953)
C4': (74.707,-15.874,83.531)
C2': (73.941,-14.639,81.662)
C2: (77.080,-11.151,79.313)
N1: (77.836,-11.493,78.274)
N3: (76.479,-11.894,80.241)
N6: (78.778,-13.175,77.097)
N7: (77.534,-15.042,79.031)
N9: (76.248,-14.264,80.735)
O5': (75.455,-17.723,82.215)
O3': (73.289,-14.046,83.848)
Image (generated by PyMOL):
PyMOL image
show in jmol