ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:51380:51378

Extra

PDB:
ATOM 1 O3' G A1379 111.066 -11.550 210.628 1.00 42.60 O
ATOM 2 P U A1380 110.794 -11.753 212.188 1.00 36.91 P
ATOM 3 OP1 U A1380 111.555 -10.851 212.872 1.00 36.52 O
ATOM 4 OP2 U A1380 110.975 -13.187 212.506 1.00 36.98 O
ATOM 5 O5' U A1380 109.297 -11.330 212.327 1.00 37.10 O
ATOM 6 C5' U A1380 108.918 -9.997 212.162 1.00 37.05 C
ATOM 7 C4' U A1380 107.802 -9.653 213.087 1.00 37.02 C
ATOM 8 O4' U A1380 106.747 -10.603 212.941 1.00 37.36 O
ATOM 9 C3' U A1380 108.149 -9.725 214.551 1.00 36.65 C
ATOM 10 O3' U A1380 108.837 -8.565 214.978 1.00 36.31 O
ATOM 11 C2' U A1380 106.795 -9.898 215.200 1.00 36.79 C
ATOM 12 O2' U A1380 106.167 -8.644 215.324 1.00 36.76 O
ATOM 13 C1' U A1380 106.048 -10.711 214.146 1.00 37.25 C
ATOM 14 N1 U A1380 105.972 -12.106 214.491 1.00 37.35 N
ATOM 15 C2 U A1380 104.988 -12.490 215.408 1.00 37.40 C
ATOM 16 O2 U A1380 104.207 -11.687 215.948 1.00 37.35 O
ATOM 17 N3 U A1380 104.960 -13.846 215.666 1.00 37.52 N
ATOM 18 C4 U A1380 105.813 -14.767 215.095 1.00 37.58 C
ATOM 19 O4 U A1380 105.723 -15.950 215.401 1.00 37.69 O
ATOM 20 C5 U A1380 106.760 -14.244 214.158 1.00 37.53 C
ATOM 21 C6 U A1380 106.815 -12.956 213.867 1.00 37.42 C
ATOM 22 P G A1381 109.621 -8.542 216.350 1.00 37.58 P
ATOM 23 OP1 G A1381 111.045 -8.196 216.003 1.00 37.36 O
ATOM 24 OP2 G A1381 109.338 -9.817 217.050 1.00 37.62 O
ATOM 25 O5' G A1381 108.925 -7.349 217.117 1.00 37.44 O
TER

ATOM 1 O3' U B1377 105.150 -20.715 209.260 1.00 41.48 O
ATOM 2 P A B1378 106.087 -20.812 210.574 1.00 44.29 P
ATOM 3 OP1 A B1378 106.966 -21.950 210.376 1.00 44.35 O
ATOM 4 OP2 A B1378 105.209 -20.771 211.790 1.00 44.17 O
ATOM 5 O5' A B1378 106.931 -19.482 210.505 1.00 43.93 O
ATOM 6 C5' A B1378 107.657 -19.178 209.348 1.00 44.02 C
ATOM 7 C4' A B1378 107.546 -17.726 208.980 1.00 43.91 C
ATOM 8 O4' A B1378 106.262 -17.182 209.403 1.00 43.97 O
ATOM 9 C3' A B1378 108.595 -16.830 209.579 1.00 43.44 C
ATOM 10 O3' A B1378 108.891 -15.834 208.638 1.00 43.47 O
ATOM 11 C2' A B1378 107.855 -16.197 210.744 1.00 43.21 C
ATOM 12 O2' A B1378 108.432 -14.978 211.219 1.00 42.83 O
ATOM 13 C1' A B1378 106.482 -16.002 210.123 1.00 43.59 C
ATOM 14 N9 A B1378 105.400 -15.870 211.077 1.00 43.56 N
ATOM 15 C8 A B1378 104.777 -16.899 211.697 1.00 43.69 C
ATOM 16 N7 A B1378 103.815 -16.520 212.489 1.00 43.65 N
ATOM 17 C5 A B1378 103.814 -15.152 212.359 1.00 43.50 C
ATOM 18 C6 A B1378 103.040 -14.178 212.945 1.00 43.40 C
ATOM 19 N6 A B1378 102.082 -14.434 213.807 1.00 43.45 N
ATOM 20 N1 A B1378 103.272 -12.905 212.616 1.00 43.26 N
ATOM 21 C2 A B1378 104.236 -12.632 211.737 1.00 43.23 C
ATOM 22 N3 A B1378 105.041 -13.470 211.116 1.00 43.31 N
ATOM 23 C4 A B1378 104.769 -14.734 211.481 1.00 43.44 C
ATOM 24 P G B1379 109.923 -16.122 207.457 1.00 44.16 P
ATOM 25 OP1 G B1379 109.216 -15.872 206.172 1.00 44.58 O
ATOM 26 OP2 G B1379 110.511 -17.462 207.710 1.00 44.18 O
ATOM 27 O5' G B1379 111.011 -14.985 207.704 1.00 43.75 O
TER

Atoms:
C4: (105.813,-14.767,215.095)
N3: (104.960,-13.846,215.666)
OP1: (111.555,-10.851,212.872)
OP2: (110.975,-13.187,212.506)
C2: (104.988,-12.490,215.408)
C1': (106.048,-10.711,214.146)
C3': (108.149,-9.725,214.551)
O5': (109.297,-11.330,212.327)
O4': (106.747,-10.603,212.941)
C5': (108.918,-9.997,212.162)
P: (110.794,-11.753,212.188)
C4': (107.802,-9.653,213.087)
C2': (106.795,-9.898,215.200)
O2': (106.167,-8.644,215.324)
N1: (105.972,-12.106,214.491)
O4: (105.723,-15.950,215.401)
O2: (104.207,-11.687,215.948)
C6: (106.815,-12.956,213.867)
C5: (106.760,-14.244,214.158)
O3': (108.837,-8.565,214.978)
OP1: (106.966,-21.950,210.376)
OP2: (105.209,-20.771,211.790)
C3': (108.595,-16.830,209.579)
C1': (106.482,-16.002,210.123)
C5': (107.657,-19.178,209.348)
O4': (106.262,-17.182,209.403)
C8: (104.777,-16.899,211.697)
O2': (108.432,-14.978,211.219)
C6: (103.040,-14.178,212.945)
C5: (103.814,-15.152,212.359)
C4: (104.769,-14.734,211.481)
P: (106.087,-20.812,210.574)
C4': (107.546,-17.726,208.980)
C2': (107.855,-16.197,210.744)
C2: (104.236,-12.632,211.737)
N1: (103.272,-12.905,212.616)
N3: (105.041,-13.470,211.116)
N6: (102.082,-14.434,213.807)
N7: (103.815,-16.520,212.489)
N9: (105.400,-15.870,211.077)
O5': (106.931,-19.482,210.505)
O3': (108.891,-15.834,208.638)
Image (generated by PyMOL):
PyMOL image
show in jmol