Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A1087:A1085
Extra
PDB:
ATOM 1 O3' C A1086 49.553 101.155 115.441 1.00 35.66 O
ATOM 2 P U A1087 48.346 100.930 116.459 1.00 35.49 P
ATOM 3 OP1 U A1087 48.974 100.888 117.773 1.00 35.88 O
ATOM 4 OP2 U A1087 47.556 99.761 115.989 1.00 36.48 O
ATOM 5 O5' U A1087 47.481 102.257 116.318 1.00 36.26 O
ATOM 6 C5' U A1087 48.030 103.548 116.627 1.00 38.78 C
ATOM 7 C4' U A1087 46.956 104.603 116.518 1.00 40.98 C
ATOM 8 O4' U A1087 46.628 104.826 115.118 1.00 42.09 O
ATOM 9 C3' U A1087 45.642 104.239 117.194 1.00 40.93 C
ATOM 10 O3' U A1087 45.011 105.428 117.628 1.00 40.60 O
ATOM 11 C2' U A1087 44.840 103.654 116.038 1.00 42.16 C
ATOM 12 O2' U A1087 43.450 103.690 116.255 1.00 42.26 O
ATOM 13 C1' U A1087 45.248 104.606 114.921 1.00 43.18 C
ATOM 14 N1 U A1087 45.022 104.138 113.546 1.00 45.45 N
ATOM 15 C2 U A1087 44.445 105.038 112.665 1.00 46.22 C
ATOM 16 O2 U A1087 44.181 106.182 112.971 1.00 47.55 O
ATOM 17 N3 U A1087 44.196 104.545 111.412 1.00 45.47 N
ATOM 18 C4 U A1087 44.468 103.281 110.953 1.00 45.58 C
ATOM 19 O4 U A1087 44.254 103.018 109.775 1.00 44.43 O
ATOM 20 C5 U A1087 45.085 102.412 111.906 1.00 46.12 C
ATOM 21 C6 U A1087 45.344 102.859 113.138 1.00 45.95 C
ATOM 22 P C A1088 44.982 105.784 119.181 1.00 42.03 P
ATOM 23 OP1 C A1088 44.362 107.132 119.337 1.00 41.76 O
ATOM 24 OP2 C A1088 46.349 105.541 119.695 1.00 41.99 O
ATOM 25 O5' C A1088 44.001 104.693 119.807 1.00 41.09 O
TER
ATOM 1 O3' U B1084 42.572 94.005 115.228 1.00 39.62 O
ATOM 2 P C B1085 43.944 94.674 115.704 1.00 40.02 P
ATOM 3 OP1 C B1085 45.056 93.854 115.182 1.00 40.57 O
ATOM 4 OP2 C B1085 43.855 94.954 117.163 1.00 38.58 O
ATOM 5 O5' C B1085 43.976 96.021 114.867 1.00 38.56 O
ATOM 6 C5' C B1085 44.016 95.962 113.443 1.00 35.88 C
ATOM 7 C4' C B1085 44.135 97.341 112.857 1.00 36.03 C
ATOM 8 O4' C B1085 43.030 98.118 113.350 1.00 35.39 O
ATOM 9 C3' C B1085 45.391 98.142 113.189 1.00 35.11 C
ATOM 10 O3' C B1085 45.649 99.016 112.085 1.00 36.14 O
ATOM 11 C2' C B1085 44.972 98.909 114.438 1.00 33.42 C
ATOM 12 O2' C B1085 45.641 100.133 114.605 1.00 34.42 O
ATOM 13 C1' C B1085 43.513 99.189 114.128 1.00 32.78 C
ATOM 14 N1 C B1085 42.649 99.313 115.302 1.00 30.36 N
ATOM 15 C2 C B1085 42.049 100.534 115.533 1.00 31.71 C
ATOM 16 O2 C B1085 42.357 101.486 114.802 1.00 34.47 O
ATOM 17 N3 C B1085 41.160 100.656 116.543 1.00 30.34 N
ATOM 18 C4 C B1085 40.895 99.602 117.324 1.00 30.13 C
ATOM 19 N4 C B1085 39.982 99.748 118.286 1.00 30.36 N
ATOM 20 C5 C B1085 41.549 98.346 117.143 1.00 29.82 C
ATOM 21 C6 C B1085 42.407 98.249 116.128 1.00 29.08 C
ATOM 22 P C B1086 47.109 99.049 111.399 1.00 36.94 P
ATOM 23 OP1 C B1086 47.008 99.819 110.144 1.00 37.73 O
ATOM 24 OP2 C B1086 47.692 97.685 111.381 1.00 35.32 O
ATOM 25 O5' C B1086 47.952 99.949 112.390 1.00 36.97 O
TER
ATOM 2 P U A1087 48.346 100.930 116.459 1.00 35.49 P
ATOM 3 OP1 U A1087 48.974 100.888 117.773 1.00 35.88 O
ATOM 4 OP2 U A1087 47.556 99.761 115.989 1.00 36.48 O
ATOM 5 O5' U A1087 47.481 102.257 116.318 1.00 36.26 O
ATOM 6 C5' U A1087 48.030 103.548 116.627 1.00 38.78 C
ATOM 7 C4' U A1087 46.956 104.603 116.518 1.00 40.98 C
ATOM 8 O4' U A1087 46.628 104.826 115.118 1.00 42.09 O
ATOM 9 C3' U A1087 45.642 104.239 117.194 1.00 40.93 C
ATOM 10 O3' U A1087 45.011 105.428 117.628 1.00 40.60 O
ATOM 11 C2' U A1087 44.840 103.654 116.038 1.00 42.16 C
ATOM 12 O2' U A1087 43.450 103.690 116.255 1.00 42.26 O
ATOM 13 C1' U A1087 45.248 104.606 114.921 1.00 43.18 C
ATOM 14 N1 U A1087 45.022 104.138 113.546 1.00 45.45 N
ATOM 15 C2 U A1087 44.445 105.038 112.665 1.00 46.22 C
ATOM 16 O2 U A1087 44.181 106.182 112.971 1.00 47.55 O
ATOM 17 N3 U A1087 44.196 104.545 111.412 1.00 45.47 N
ATOM 18 C4 U A1087 44.468 103.281 110.953 1.00 45.58 C
ATOM 19 O4 U A1087 44.254 103.018 109.775 1.00 44.43 O
ATOM 20 C5 U A1087 45.085 102.412 111.906 1.00 46.12 C
ATOM 21 C6 U A1087 45.344 102.859 113.138 1.00 45.95 C
ATOM 22 P C A1088 44.982 105.784 119.181 1.00 42.03 P
ATOM 23 OP1 C A1088 44.362 107.132 119.337 1.00 41.76 O
ATOM 24 OP2 C A1088 46.349 105.541 119.695 1.00 41.99 O
ATOM 25 O5' C A1088 44.001 104.693 119.807 1.00 41.09 O
TER
ATOM 1 O3' U B1084 42.572 94.005 115.228 1.00 39.62 O
ATOM 2 P C B1085 43.944 94.674 115.704 1.00 40.02 P
ATOM 3 OP1 C B1085 45.056 93.854 115.182 1.00 40.57 O
ATOM 4 OP2 C B1085 43.855 94.954 117.163 1.00 38.58 O
ATOM 5 O5' C B1085 43.976 96.021 114.867 1.00 38.56 O
ATOM 6 C5' C B1085 44.016 95.962 113.443 1.00 35.88 C
ATOM 7 C4' C B1085 44.135 97.341 112.857 1.00 36.03 C
ATOM 8 O4' C B1085 43.030 98.118 113.350 1.00 35.39 O
ATOM 9 C3' C B1085 45.391 98.142 113.189 1.00 35.11 C
ATOM 10 O3' C B1085 45.649 99.016 112.085 1.00 36.14 O
ATOM 11 C2' C B1085 44.972 98.909 114.438 1.00 33.42 C
ATOM 12 O2' C B1085 45.641 100.133 114.605 1.00 34.42 O
ATOM 13 C1' C B1085 43.513 99.189 114.128 1.00 32.78 C
ATOM 14 N1 C B1085 42.649 99.313 115.302 1.00 30.36 N
ATOM 15 C2 C B1085 42.049 100.534 115.533 1.00 31.71 C
ATOM 16 O2 C B1085 42.357 101.486 114.802 1.00 34.47 O
ATOM 17 N3 C B1085 41.160 100.656 116.543 1.00 30.34 N
ATOM 18 C4 C B1085 40.895 99.602 117.324 1.00 30.13 C
ATOM 19 N4 C B1085 39.982 99.748 118.286 1.00 30.36 N
ATOM 20 C5 C B1085 41.549 98.346 117.143 1.00 29.82 C
ATOM 21 C6 C B1085 42.407 98.249 116.128 1.00 29.08 C
ATOM 22 P C B1086 47.109 99.049 111.399 1.00 36.94 P
ATOM 23 OP1 C B1086 47.008 99.819 110.144 1.00 37.73 O
ATOM 24 OP2 C B1086 47.692 97.685 111.381 1.00 35.32 O
ATOM 25 O5' C B1086 47.952 99.949 112.390 1.00 36.97 O
TER
Atoms:
C4: (44.468,103.281,110.953)
N3: (44.196,104.545,111.412)
OP1: (48.974,100.888,117.773)
OP2: (47.556,99.761,115.989)
C2: (44.445,105.038,112.665)
C1': (45.248,104.606,114.921)
C3': (45.642,104.239,117.194)
O5': (47.481,102.257,116.318)
O4': (46.628,104.826,115.118)
C5': (48.030,103.548,116.627)
P: (48.346,100.930,116.459)
C4': (46.956,104.603,116.518)
C2': (44.840,103.654,116.038)
O2': (43.450,103.690,116.255)
N1: (45.022,104.138,113.546)
O4: (44.254,103.018,109.775)
O2: (44.181,106.182,112.971)
C6: (45.344,102.859,113.138)
C5: (45.085,102.412,111.906)
O3': (45.011,105.428,117.628)
N3: (44.196,104.545,111.412)
OP1: (48.974,100.888,117.773)
OP2: (47.556,99.761,115.989)
C2: (44.445,105.038,112.665)
C1': (45.248,104.606,114.921)
C3': (45.642,104.239,117.194)
O5': (47.481,102.257,116.318)
O4': (46.628,104.826,115.118)
C5': (48.030,103.548,116.627)
P: (48.346,100.930,116.459)
C4': (46.956,104.603,116.518)
C2': (44.840,103.654,116.038)
O2': (43.450,103.690,116.255)
N1: (45.022,104.138,113.546)
O4: (44.254,103.018,109.775)
O2: (44.181,106.182,112.971)
C6: (45.344,102.859,113.138)
C5: (45.085,102.412,111.906)
O3': (45.011,105.428,117.628)
C2: (42.049,100.534,115.533)
OP1: (45.056,93.854,115.182)
OP2: (43.855,94.954,117.163)
C4: (40.895,99.602,117.324)
O5': (43.976,96.021,114.867)
C3': (45.391,98.142,113.189)
C1': (43.513,99.189,114.128)
O4': (43.030,98.118,113.350)
C5': (44.016,95.962,113.443)
P: (43.944,94.674,115.704)
O2: (42.357,101.486,114.802)
C4': (44.135,97.341,112.857)
C2': (44.972,98.909,114.438)
O2': (45.641,100.133,114.605)
N1: (42.649,99.313,115.302)
N3: (41.160,100.656,116.543)
N4: (39.982,99.748,118.286)
C6: (42.407,98.249,116.128)
C5: (41.549,98.346,117.143)
O3': (45.649,99.016,112.085)
OP1: (45.056,93.854,115.182)
OP2: (43.855,94.954,117.163)
C4: (40.895,99.602,117.324)
O5': (43.976,96.021,114.867)
C3': (45.391,98.142,113.189)
C1': (43.513,99.189,114.128)
O4': (43.030,98.118,113.350)
C5': (44.016,95.962,113.443)
P: (43.944,94.674,115.704)
O2: (42.357,101.486,114.802)
C4': (44.135,97.341,112.857)
C2': (44.972,98.909,114.438)
O2': (45.641,100.133,114.605)
N1: (42.649,99.313,115.302)
N3: (41.160,100.656,116.543)
N4: (39.982,99.748,118.286)
C6: (42.407,98.249,116.128)
C5: (41.549,98.346,117.143)
O3': (45.649,99.016,112.085)
Image (generated by PyMOL):