Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A827:A2488
Extra
PDB:
ATOM 1 O3' C A 826 63.297 143.779 91.371 1.00 32.74 O
ATOM 2 P U A 827 61.757 144.104 91.624 1.00 32.74 P
ATOM 3 OP1 U A 827 61.675 144.849 92.903 1.00 34.00 O
ATOM 4 OP2 U A 827 61.065 142.824 91.489 1.00 33.27 O
ATOM 5 O5' U A 827 61.351 145.053 90.404 1.00 33.90 O
ATOM 6 C5' U A 827 61.626 144.660 89.025 1.00 31.97 C
ATOM 7 C4' U A 827 60.431 144.903 88.124 1.00 32.25 C
ATOM 8 O4' U A 827 59.385 143.965 88.445 1.00 32.78 O
ATOM 9 C3' U A 827 59.784 146.274 88.223 1.00 32.42 C
ATOM 10 O3' U A 827 60.398 147.160 87.304 1.00 30.71 O
ATOM 11 C2' U A 827 58.345 146.023 87.796 1.00 32.51 C
ATOM 12 O2' U A 827 58.181 146.137 86.398 1.00 35.03 O
ATOM 13 C1' U A 827 58.127 144.572 88.236 1.00 33.26 C
ATOM 14 N1 U A 827 57.279 144.317 89.411 1.00 34.89 N
ATOM 15 C2 U A 827 55.923 144.577 89.309 1.00 36.06 C
ATOM 16 O2 U A 827 55.418 145.126 88.346 1.00 37.18 O
ATOM 17 N3 U A 827 55.167 144.190 90.389 1.00 37.20 N
ATOM 18 C4 U A 827 55.608 143.615 91.552 1.00 37.44 C
ATOM 19 O4 U A 827 54.786 143.159 92.349 1.00 37.20 O
ATOM 20 C5 U A 827 57.030 143.449 91.620 1.00 38.19 C
ATOM 21 C6 U A 827 57.798 143.793 90.571 1.00 35.34 C
ATOM 22 P A A 828 60.049 148.723 87.340 1.00 30.87 P
ATOM 23 OP1 A A 828 58.993 148.907 88.356 1.00 29.19 O
ATOM 24 OP2 A A 828 59.845 149.232 85.969 1.00 31.49 O
ATOM 25 O5' A A 828 61.393 149.379 87.870 1.00 28.71 O
TER
ATOM 1 O3' G B2487 64.712 141.496 95.549 1.00 31.63 O
ATOM 2 P C B2488 63.528 142.083 96.421 1.00 31.55 P
ATOM 3 OP1 C B2488 63.549 143.513 96.113 1.00 30.90 O
ATOM 4 OP2 C B2488 63.685 141.621 97.827 1.00 30.53 O
ATOM 5 O5' C B2488 62.232 141.410 95.791 1.00 31.21 O
ATOM 6 C5' C B2488 61.602 141.972 94.638 1.00 34.04 C
ATOM 7 C4' C B2488 60.153 141.584 94.603 1.00 37.59 C
ATOM 8 O4' C B2488 60.065 140.141 94.556 1.00 40.09 O
ATOM 9 C3' C B2488 59.370 141.945 95.847 1.00 38.34 C
ATOM 10 O3' C B2488 58.832 143.240 95.752 1.00 37.29 O
ATOM 11 C2' C B2488 58.228 140.950 95.832 1.00 39.76 C
ATOM 12 O2' C B2488 57.199 141.370 94.963 1.00 40.72 O
ATOM 13 C1' C B2488 58.926 139.706 95.288 1.00 40.67 C
ATOM 14 N1 C B2488 59.363 138.782 96.345 1.00 42.34 N
ATOM 15 C2 C B2488 58.433 137.918 96.889 1.00 43.19 C
ATOM 16 O2 C B2488 57.260 137.952 96.466 1.00 47.06 O
ATOM 17 N3 C B2488 58.818 137.059 97.857 1.00 41.84 N
ATOM 18 C4 C B2488 60.070 137.046 98.280 1.00 39.66 C
ATOM 19 N4 C B2488 60.382 136.174 99.231 1.00 40.48 N
ATOM 20 C5 C B2488 61.051 137.921 97.746 1.00 40.44 C
ATOM 21 C6 C B2488 60.659 138.767 96.787 1.00 41.99 C
ATOM 22 P U B2489 58.735 144.134 97.059 1.00 35.79 P
ATOM 23 OP1 U B2489 59.569 145.296 96.739 1.00 35.39 O
ATOM 24 OP2 U B2489 59.044 143.295 98.244 1.00 35.57 O
ATOM 25 O5' U B2489 57.236 144.649 97.121 1.00 34.85 O
TER
ATOM 2 P U A 827 61.757 144.104 91.624 1.00 32.74 P
ATOM 3 OP1 U A 827 61.675 144.849 92.903 1.00 34.00 O
ATOM 4 OP2 U A 827 61.065 142.824 91.489 1.00 33.27 O
ATOM 5 O5' U A 827 61.351 145.053 90.404 1.00 33.90 O
ATOM 6 C5' U A 827 61.626 144.660 89.025 1.00 31.97 C
ATOM 7 C4' U A 827 60.431 144.903 88.124 1.00 32.25 C
ATOM 8 O4' U A 827 59.385 143.965 88.445 1.00 32.78 O
ATOM 9 C3' U A 827 59.784 146.274 88.223 1.00 32.42 C
ATOM 10 O3' U A 827 60.398 147.160 87.304 1.00 30.71 O
ATOM 11 C2' U A 827 58.345 146.023 87.796 1.00 32.51 C
ATOM 12 O2' U A 827 58.181 146.137 86.398 1.00 35.03 O
ATOM 13 C1' U A 827 58.127 144.572 88.236 1.00 33.26 C
ATOM 14 N1 U A 827 57.279 144.317 89.411 1.00 34.89 N
ATOM 15 C2 U A 827 55.923 144.577 89.309 1.00 36.06 C
ATOM 16 O2 U A 827 55.418 145.126 88.346 1.00 37.18 O
ATOM 17 N3 U A 827 55.167 144.190 90.389 1.00 37.20 N
ATOM 18 C4 U A 827 55.608 143.615 91.552 1.00 37.44 C
ATOM 19 O4 U A 827 54.786 143.159 92.349 1.00 37.20 O
ATOM 20 C5 U A 827 57.030 143.449 91.620 1.00 38.19 C
ATOM 21 C6 U A 827 57.798 143.793 90.571 1.00 35.34 C
ATOM 22 P A A 828 60.049 148.723 87.340 1.00 30.87 P
ATOM 23 OP1 A A 828 58.993 148.907 88.356 1.00 29.19 O
ATOM 24 OP2 A A 828 59.845 149.232 85.969 1.00 31.49 O
ATOM 25 O5' A A 828 61.393 149.379 87.870 1.00 28.71 O
TER
ATOM 1 O3' G B2487 64.712 141.496 95.549 1.00 31.63 O
ATOM 2 P C B2488 63.528 142.083 96.421 1.00 31.55 P
ATOM 3 OP1 C B2488 63.549 143.513 96.113 1.00 30.90 O
ATOM 4 OP2 C B2488 63.685 141.621 97.827 1.00 30.53 O
ATOM 5 O5' C B2488 62.232 141.410 95.791 1.00 31.21 O
ATOM 6 C5' C B2488 61.602 141.972 94.638 1.00 34.04 C
ATOM 7 C4' C B2488 60.153 141.584 94.603 1.00 37.59 C
ATOM 8 O4' C B2488 60.065 140.141 94.556 1.00 40.09 O
ATOM 9 C3' C B2488 59.370 141.945 95.847 1.00 38.34 C
ATOM 10 O3' C B2488 58.832 143.240 95.752 1.00 37.29 O
ATOM 11 C2' C B2488 58.228 140.950 95.832 1.00 39.76 C
ATOM 12 O2' C B2488 57.199 141.370 94.963 1.00 40.72 O
ATOM 13 C1' C B2488 58.926 139.706 95.288 1.00 40.67 C
ATOM 14 N1 C B2488 59.363 138.782 96.345 1.00 42.34 N
ATOM 15 C2 C B2488 58.433 137.918 96.889 1.00 43.19 C
ATOM 16 O2 C B2488 57.260 137.952 96.466 1.00 47.06 O
ATOM 17 N3 C B2488 58.818 137.059 97.857 1.00 41.84 N
ATOM 18 C4 C B2488 60.070 137.046 98.280 1.00 39.66 C
ATOM 19 N4 C B2488 60.382 136.174 99.231 1.00 40.48 N
ATOM 20 C5 C B2488 61.051 137.921 97.746 1.00 40.44 C
ATOM 21 C6 C B2488 60.659 138.767 96.787 1.00 41.99 C
ATOM 22 P U B2489 58.735 144.134 97.059 1.00 35.79 P
ATOM 23 OP1 U B2489 59.569 145.296 96.739 1.00 35.39 O
ATOM 24 OP2 U B2489 59.044 143.295 98.244 1.00 35.57 O
ATOM 25 O5' U B2489 57.236 144.649 97.121 1.00 34.85 O
TER
Atoms:
C4: (55.608,143.615,91.552)
N3: (55.167,144.190,90.389)
OP1: (61.675,144.849,92.903)
OP2: (61.065,142.824,91.489)
C2: (55.923,144.577,89.309)
C1': (58.127,144.572,88.236)
C3': (59.784,146.274,88.223)
O5': (61.351,145.053,90.404)
O4': (59.385,143.965,88.445)
C5': (61.626,144.660,89.025)
P: (61.757,144.104,91.624)
C4': (60.431,144.903,88.124)
C2': (58.345,146.023,87.796)
O2': (58.181,146.137,86.398)
N1: (57.279,144.317,89.411)
O4: (54.786,143.159,92.349)
O2: (55.418,145.126,88.346)
C6: (57.798,143.793,90.571)
C5: (57.030,143.449,91.620)
O3': (60.398,147.160,87.304)
N3: (55.167,144.190,90.389)
OP1: (61.675,144.849,92.903)
OP2: (61.065,142.824,91.489)
C2: (55.923,144.577,89.309)
C1': (58.127,144.572,88.236)
C3': (59.784,146.274,88.223)
O5': (61.351,145.053,90.404)
O4': (59.385,143.965,88.445)
C5': (61.626,144.660,89.025)
P: (61.757,144.104,91.624)
C4': (60.431,144.903,88.124)
C2': (58.345,146.023,87.796)
O2': (58.181,146.137,86.398)
N1: (57.279,144.317,89.411)
O4: (54.786,143.159,92.349)
O2: (55.418,145.126,88.346)
C6: (57.798,143.793,90.571)
C5: (57.030,143.449,91.620)
O3': (60.398,147.160,87.304)
C2: (58.433,137.918,96.889)
OP1: (63.549,143.513,96.113)
OP2: (63.685,141.621,97.827)
C4: (60.070,137.046,98.280)
O5': (62.232,141.410,95.791)
C3': (59.370,141.945,95.847)
C1': (58.926,139.706,95.288)
O4': (60.065,140.141,94.556)
C5': (61.602,141.972,94.638)
P: (63.528,142.083,96.421)
O2: (57.260,137.952,96.466)
C4': (60.153,141.584,94.603)
C2': (58.228,140.950,95.832)
O2': (57.199,141.370,94.963)
N1: (59.363,138.782,96.345)
N3: (58.818,137.059,97.857)
N4: (60.382,136.174,99.231)
C6: (60.659,138.767,96.787)
C5: (61.051,137.921,97.746)
O3': (58.832,143.240,95.752)
OP1: (63.549,143.513,96.113)
OP2: (63.685,141.621,97.827)
C4: (60.070,137.046,98.280)
O5': (62.232,141.410,95.791)
C3': (59.370,141.945,95.847)
C1': (58.926,139.706,95.288)
O4': (60.065,140.141,94.556)
C5': (61.602,141.972,94.638)
P: (63.528,142.083,96.421)
O2: (57.260,137.952,96.466)
C4': (60.153,141.584,94.603)
C2': (58.228,140.950,95.832)
O2': (57.199,141.370,94.963)
N1: (59.363,138.782,96.345)
N3: (58.818,137.059,97.857)
N4: (60.382,136.174,99.231)
C6: (60.659,138.767,96.787)
C5: (61.051,137.921,97.746)
O3': (58.832,143.240,95.752)
Image (generated by PyMOL):