Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5O:E60:D10
Extra
PDB:
ATOM 1 O3' U A 59 -0.100 18.120 123.809 1.00 87.41 O
ATOM 2 P U A 60 -1.575 18.288 124.430 1.00 69.44 P
ATOM 3 OP1 U A 60 -1.469 19.244 125.556 1.00 74.44 O
ATOM 4 OP2 U A 60 -2.153 16.941 124.666 1.00 79.73 O
ATOM 5 O5' U A 60 -2.407 18.997 123.269 1.00 86.98 O
ATOM 6 C5' U A 60 -3.403 19.964 123.585 1.00 85.84 C
ATOM 7 C4' U A 60 -4.320 20.199 122.405 1.00 85.63 C
ATOM 8 O4' U A 60 -3.586 20.874 121.347 1.00 87.82 O
ATOM 9 C3' U A 60 -4.825 18.895 121.797 1.00 81.80 C
ATOM 10 O3' U A 60 -6.247 18.811 121.684 1.00 87.73 O
ATOM 11 C2' U A 60 -3.944 18.620 120.576 1.00 81.54 C
ATOM 12 O2' U A 60 -4.682 18.172 119.461 1.00100.32 O
ATOM 13 C1' U A 60 -3.438 20.021 120.232 1.00 85.08 C
ATOM 14 N1 U A 60 -2.085 20.154 119.673 1.00 86.10 N
ATOM 15 C2 U A 60 -1.969 20.102 118.293 1.00 85.01 C
ATOM 16 O2 U A 60 -2.924 19.946 117.554 1.00 84.96 O
ATOM 17 N3 U A 60 -0.695 20.244 117.811 1.00 85.35 N
ATOM 18 C4 U A 60 0.453 20.427 118.546 1.00 86.94 C
ATOM 19 O4 U A 60 1.532 20.536 117.960 1.00 88.31 O
ATOM 20 C5 U A 60 0.255 20.468 119.966 1.00 86.94 C
ATOM 21 C6 U A 60 -0.979 20.331 120.468 1.00 86.24 C
ATOM 22 P A A 61 -6.959 17.401 121.383 1.00 81.61 P
ATOM 23 OP1 A A 61 -7.743 17.014 122.579 1.00 83.17 O
ATOM 24 OP2 A A 61 -5.945 16.466 120.841 1.00 98.91 O
ATOM 25 O5' A A 61 -7.988 17.745 120.216 1.00 92.66 O
TER
ATOM 1 O3' A B 9 1.288 21.847 128.485 1.00 83.58 O
ATOM 2 P C B 10 2.868 21.619 128.303 1.00 87.09 P
ATOM 3 OP1 C B 10 3.286 20.501 129.191 1.00 85.21 O
ATOM 4 OP2 C B 10 3.512 22.951 128.446 1.00 77.58 O
ATOM 5 O5' C B 10 3.016 21.154 126.784 1.00 84.52 O
ATOM 6 C5' C B 10 2.265 20.052 126.281 1.00 82.13 C
ATOM 7 C4' C B 10 2.308 20.025 124.768 1.00 80.25 C
ATOM 8 O4' C B 10 1.617 21.172 124.218 1.00 84.05 O
ATOM 9 C3' C B 10 3.685 20.108 124.139 1.00 79.27 C
ATOM 10 O3' C B 10 4.284 18.820 124.146 1.00 77.08 O
ATOM 11 C2' C B 10 3.374 20.571 122.717 1.00 75.42 C
ATOM 12 O2' C B 10 3.063 19.508 121.839 1.00 81.04 O
ATOM 13 C1' C B 10 2.134 21.447 122.929 1.00 74.64 C
ATOM 14 N1 C B 10 2.391 22.890 122.809 1.00 68.06 N
ATOM 15 C2 C B 10 2.303 23.467 121.548 1.00 68.16 C
ATOM 16 O2 C B 10 2.003 22.746 120.585 1.00 70.66 O
ATOM 17 N3 C B 10 2.544 24.788 121.404 1.00 67.99 N
ATOM 18 C4 C B 10 2.862 25.526 122.468 1.00 66.78 C
ATOM 19 N4 C B 10 3.092 26.828 122.277 1.00 66.55 N
ATOM 20 C5 C B 10 2.959 24.964 123.772 1.00 66.42 C
ATOM 21 C6 C B 10 2.716 23.651 123.896 1.00 68.10 C
TER
ATOM 2 P U A 60 -1.575 18.288 124.430 1.00 69.44 P
ATOM 3 OP1 U A 60 -1.469 19.244 125.556 1.00 74.44 O
ATOM 4 OP2 U A 60 -2.153 16.941 124.666 1.00 79.73 O
ATOM 5 O5' U A 60 -2.407 18.997 123.269 1.00 86.98 O
ATOM 6 C5' U A 60 -3.403 19.964 123.585 1.00 85.84 C
ATOM 7 C4' U A 60 -4.320 20.199 122.405 1.00 85.63 C
ATOM 8 O4' U A 60 -3.586 20.874 121.347 1.00 87.82 O
ATOM 9 C3' U A 60 -4.825 18.895 121.797 1.00 81.80 C
ATOM 10 O3' U A 60 -6.247 18.811 121.684 1.00 87.73 O
ATOM 11 C2' U A 60 -3.944 18.620 120.576 1.00 81.54 C
ATOM 12 O2' U A 60 -4.682 18.172 119.461 1.00100.32 O
ATOM 13 C1' U A 60 -3.438 20.021 120.232 1.00 85.08 C
ATOM 14 N1 U A 60 -2.085 20.154 119.673 1.00 86.10 N
ATOM 15 C2 U A 60 -1.969 20.102 118.293 1.00 85.01 C
ATOM 16 O2 U A 60 -2.924 19.946 117.554 1.00 84.96 O
ATOM 17 N3 U A 60 -0.695 20.244 117.811 1.00 85.35 N
ATOM 18 C4 U A 60 0.453 20.427 118.546 1.00 86.94 C
ATOM 19 O4 U A 60 1.532 20.536 117.960 1.00 88.31 O
ATOM 20 C5 U A 60 0.255 20.468 119.966 1.00 86.94 C
ATOM 21 C6 U A 60 -0.979 20.331 120.468 1.00 86.24 C
ATOM 22 P A A 61 -6.959 17.401 121.383 1.00 81.61 P
ATOM 23 OP1 A A 61 -7.743 17.014 122.579 1.00 83.17 O
ATOM 24 OP2 A A 61 -5.945 16.466 120.841 1.00 98.91 O
ATOM 25 O5' A A 61 -7.988 17.745 120.216 1.00 92.66 O
TER
ATOM 1 O3' A B 9 1.288 21.847 128.485 1.00 83.58 O
ATOM 2 P C B 10 2.868 21.619 128.303 1.00 87.09 P
ATOM 3 OP1 C B 10 3.286 20.501 129.191 1.00 85.21 O
ATOM 4 OP2 C B 10 3.512 22.951 128.446 1.00 77.58 O
ATOM 5 O5' C B 10 3.016 21.154 126.784 1.00 84.52 O
ATOM 6 C5' C B 10 2.265 20.052 126.281 1.00 82.13 C
ATOM 7 C4' C B 10 2.308 20.025 124.768 1.00 80.25 C
ATOM 8 O4' C B 10 1.617 21.172 124.218 1.00 84.05 O
ATOM 9 C3' C B 10 3.685 20.108 124.139 1.00 79.27 C
ATOM 10 O3' C B 10 4.284 18.820 124.146 1.00 77.08 O
ATOM 11 C2' C B 10 3.374 20.571 122.717 1.00 75.42 C
ATOM 12 O2' C B 10 3.063 19.508 121.839 1.00 81.04 O
ATOM 13 C1' C B 10 2.134 21.447 122.929 1.00 74.64 C
ATOM 14 N1 C B 10 2.391 22.890 122.809 1.00 68.06 N
ATOM 15 C2 C B 10 2.303 23.467 121.548 1.00 68.16 C
ATOM 16 O2 C B 10 2.003 22.746 120.585 1.00 70.66 O
ATOM 17 N3 C B 10 2.544 24.788 121.404 1.00 67.99 N
ATOM 18 C4 C B 10 2.862 25.526 122.468 1.00 66.78 C
ATOM 19 N4 C B 10 3.092 26.828 122.277 1.00 66.55 N
ATOM 20 C5 C B 10 2.959 24.964 123.772 1.00 66.42 C
ATOM 21 C6 C B 10 2.716 23.651 123.896 1.00 68.10 C
TER
Atoms:
C4: (0.453,20.427,118.546)
N3: (-0.695,20.244,117.811)
OP1: (-1.469,19.244,125.556)
OP2: (-2.153,16.941,124.666)
C2: (-1.969,20.102,118.293)
C1': (-3.438,20.021,120.232)
C3': (-4.825,18.895,121.797)
O5': (-2.407,18.997,123.269)
O4': (-3.586,20.874,121.347)
C5': (-3.403,19.964,123.585)
P: (-1.575,18.288,124.430)
C4': (-4.320,20.199,122.405)
C2': (-3.944,18.620,120.576)
O2': (-4.682,18.172,119.461)
N1: (-2.085,20.154,119.673)
O4: (1.532,20.536,117.960)
O2: (-2.924,19.946,117.554)
C6: (-0.979,20.331,120.468)
C5: (0.255,20.468,119.966)
O3': (-6.247,18.811,121.684)
N3: (-0.695,20.244,117.811)
OP1: (-1.469,19.244,125.556)
OP2: (-2.153,16.941,124.666)
C2: (-1.969,20.102,118.293)
C1': (-3.438,20.021,120.232)
C3': (-4.825,18.895,121.797)
O5': (-2.407,18.997,123.269)
O4': (-3.586,20.874,121.347)
C5': (-3.403,19.964,123.585)
P: (-1.575,18.288,124.430)
C4': (-4.320,20.199,122.405)
C2': (-3.944,18.620,120.576)
O2': (-4.682,18.172,119.461)
N1: (-2.085,20.154,119.673)
O4: (1.532,20.536,117.960)
O2: (-2.924,19.946,117.554)
C6: (-0.979,20.331,120.468)
C5: (0.255,20.468,119.966)
O3': (-6.247,18.811,121.684)
C2: (2.303,23.467,121.548)
OP1: (3.286,20.501,129.191)
OP2: (3.512,22.951,128.446)
C4: (2.862,25.526,122.468)
O5': (3.016,21.154,126.784)
C3': (3.685,20.108,124.139)
C1': (2.134,21.447,122.929)
O4': (1.617,21.172,124.218)
C5': (2.265,20.052,126.281)
P: (2.868,21.619,128.303)
O2: (2.003,22.746,120.585)
C4': (2.308,20.025,124.768)
C2': (3.374,20.571,122.717)
O2': (3.063,19.508,121.839)
N1: (2.391,22.890,122.809)
N3: (2.544,24.788,121.404)
N4: (3.092,26.828,122.277)
C6: (2.716,23.651,123.896)
C5: (2.959,24.964,123.772)
O3': (4.284,18.820,124.146)
OP1: (3.286,20.501,129.191)
OP2: (3.512,22.951,128.446)
C4: (2.862,25.526,122.468)
O5': (3.016,21.154,126.784)
C3': (3.685,20.108,124.139)
C1': (2.134,21.447,122.929)
O4': (1.617,21.172,124.218)
C5': (2.265,20.052,126.281)
P: (2.868,21.619,128.303)
O2: (2.003,22.746,120.585)
C4': (2.308,20.025,124.768)
C2': (3.374,20.571,122.717)
O2': (3.063,19.508,121.839)
N1: (2.391,22.890,122.809)
N3: (2.544,24.788,121.404)
N4: (3.092,26.828,122.277)
C6: (2.716,23.651,123.896)
C5: (2.959,24.964,123.772)
O3': (4.284,18.820,124.146)
Image (generated by PyMOL):