Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ4:01087:01085
Extra
PDB:
ATOM 1 O3' C A1086 49.827 101.880 115.395 1.00 46.47 O
ATOM 2 P U A1087 48.648 101.542 116.431 1.00 46.63 P
ATOM 3 OP1 U A1087 49.265 101.537 117.784 1.00 45.14 O
ATOM 4 OP2 U A1087 47.943 100.325 115.942 1.00 45.36 O
ATOM 5 O5' U A1087 47.679 102.799 116.331 1.00 44.45 O
ATOM 6 C5' U A1087 48.145 104.099 116.695 1.00 44.44 C
ATOM 7 C4' U A1087 47.057 105.124 116.502 1.00 46.62 C
ATOM 8 O4' U A1087 46.770 105.278 115.083 1.00 47.50 O
ATOM 9 C3' U A1087 45.721 104.821 117.174 1.00 48.20 C
ATOM 10 O3' U A1087 45.164 106.036 117.622 1.00 50.00 O
ATOM 11 C2' U A1087 44.874 104.302 116.022 1.00 47.77 C
ATOM 12 O2' U A1087 43.497 104.525 116.226 1.00 49.95 O
ATOM 13 C1' U A1087 45.379 105.178 114.883 1.00 46.27 C
ATOM 14 N1 U A1087 45.123 104.683 113.523 1.00 45.32 N
ATOM 15 C2 U A1087 44.582 105.584 112.624 1.00 45.20 C
ATOM 16 O2 U A1087 44.318 106.734 112.919 1.00 47.26 O
ATOM 17 N3 U A1087 44.360 105.093 111.366 1.00 43.98 N
ATOM 18 C4 U A1087 44.607 103.822 110.921 1.00 44.76 C
ATOM 19 O4 U A1087 44.346 103.541 109.755 1.00 45.89 O
ATOM 20 C5 U A1087 45.163 102.935 111.907 1.00 45.51 C
ATOM 21 C6 U A1087 45.399 103.388 113.144 1.00 45.15 C
ATOM 22 P C A1088 45.275 106.425 119.166 1.00 53.83 P
ATOM 23 OP1 C A1088 44.682 107.779 119.317 1.00 52.79 O
ATOM 24 OP2 C A1088 46.686 106.192 119.578 1.00 52.89 O
ATOM 25 O5' C A1088 44.349 105.344 119.891 1.00 53.50 O
TER
ATOM 1 O3' U B1084 42.685 94.639 115.030 1.00 49.25 O
ATOM 2 P C B1085 44.038 95.215 115.665 1.00 49.26 P
ATOM 3 OP1 C B1085 45.056 94.176 115.367 1.00 49.28 O
ATOM 4 OP2 C B1085 43.807 95.636 117.069 1.00 50.20 O
ATOM 5 O5' C B1085 44.335 96.532 114.818 1.00 48.86 O
ATOM 6 C5' C B1085 44.312 96.499 113.381 1.00 49.40 C
ATOM 7 C4' C B1085 44.354 97.901 112.822 1.00 49.03 C
ATOM 8 O4' C B1085 43.200 98.635 113.311 1.00 48.99 O
ATOM 9 C3' C B1085 45.572 98.743 113.182 1.00 48.54 C
ATOM 10 O3' C B1085 45.846 99.616 112.081 1.00 48.32 O
ATOM 11 C2' C B1085 45.088 99.501 114.419 1.00 48.16 C
ATOM 12 O2' C B1085 45.754 100.725 114.669 1.00 47.59 O
ATOM 13 C1' C B1085 43.624 99.750 114.066 1.00 47.90 C
ATOM 14 N1 C B1085 42.727 99.871 115.228 1.00 46.13 N
ATOM 15 C2 C B1085 42.058 101.083 115.453 1.00 46.84 C
ATOM 16 O2 C B1085 42.278 102.050 114.702 1.00 47.14 O
ATOM 17 N3 C B1085 41.195 101.174 116.486 1.00 47.66 N
ATOM 18 C4 C B1085 40.996 100.123 117.285 1.00 47.74 C
ATOM 19 N4 C B1085 40.121 100.252 118.279 1.00 48.65 N
ATOM 20 C5 C B1085 41.683 98.892 117.096 1.00 47.73 C
ATOM 21 C6 C B1085 42.531 98.810 116.066 1.00 46.51 C
ATOM 22 P C B1086 47.299 99.600 111.383 1.00 47.90 P
ATOM 23 OP1 C B1086 47.204 100.299 110.076 1.00 48.89 O
ATOM 24 OP2 C B1086 47.824 98.214 111.431 1.00 49.13 O
ATOM 25 O5' C B1086 48.170 100.520 112.341 1.00 47.08 O
TER
ATOM 2 P U A1087 48.648 101.542 116.431 1.00 46.63 P
ATOM 3 OP1 U A1087 49.265 101.537 117.784 1.00 45.14 O
ATOM 4 OP2 U A1087 47.943 100.325 115.942 1.00 45.36 O
ATOM 5 O5' U A1087 47.679 102.799 116.331 1.00 44.45 O
ATOM 6 C5' U A1087 48.145 104.099 116.695 1.00 44.44 C
ATOM 7 C4' U A1087 47.057 105.124 116.502 1.00 46.62 C
ATOM 8 O4' U A1087 46.770 105.278 115.083 1.00 47.50 O
ATOM 9 C3' U A1087 45.721 104.821 117.174 1.00 48.20 C
ATOM 10 O3' U A1087 45.164 106.036 117.622 1.00 50.00 O
ATOM 11 C2' U A1087 44.874 104.302 116.022 1.00 47.77 C
ATOM 12 O2' U A1087 43.497 104.525 116.226 1.00 49.95 O
ATOM 13 C1' U A1087 45.379 105.178 114.883 1.00 46.27 C
ATOM 14 N1 U A1087 45.123 104.683 113.523 1.00 45.32 N
ATOM 15 C2 U A1087 44.582 105.584 112.624 1.00 45.20 C
ATOM 16 O2 U A1087 44.318 106.734 112.919 1.00 47.26 O
ATOM 17 N3 U A1087 44.360 105.093 111.366 1.00 43.98 N
ATOM 18 C4 U A1087 44.607 103.822 110.921 1.00 44.76 C
ATOM 19 O4 U A1087 44.346 103.541 109.755 1.00 45.89 O
ATOM 20 C5 U A1087 45.163 102.935 111.907 1.00 45.51 C
ATOM 21 C6 U A1087 45.399 103.388 113.144 1.00 45.15 C
ATOM 22 P C A1088 45.275 106.425 119.166 1.00 53.83 P
ATOM 23 OP1 C A1088 44.682 107.779 119.317 1.00 52.79 O
ATOM 24 OP2 C A1088 46.686 106.192 119.578 1.00 52.89 O
ATOM 25 O5' C A1088 44.349 105.344 119.891 1.00 53.50 O
TER
ATOM 1 O3' U B1084 42.685 94.639 115.030 1.00 49.25 O
ATOM 2 P C B1085 44.038 95.215 115.665 1.00 49.26 P
ATOM 3 OP1 C B1085 45.056 94.176 115.367 1.00 49.28 O
ATOM 4 OP2 C B1085 43.807 95.636 117.069 1.00 50.20 O
ATOM 5 O5' C B1085 44.335 96.532 114.818 1.00 48.86 O
ATOM 6 C5' C B1085 44.312 96.499 113.381 1.00 49.40 C
ATOM 7 C4' C B1085 44.354 97.901 112.822 1.00 49.03 C
ATOM 8 O4' C B1085 43.200 98.635 113.311 1.00 48.99 O
ATOM 9 C3' C B1085 45.572 98.743 113.182 1.00 48.54 C
ATOM 10 O3' C B1085 45.846 99.616 112.081 1.00 48.32 O
ATOM 11 C2' C B1085 45.088 99.501 114.419 1.00 48.16 C
ATOM 12 O2' C B1085 45.754 100.725 114.669 1.00 47.59 O
ATOM 13 C1' C B1085 43.624 99.750 114.066 1.00 47.90 C
ATOM 14 N1 C B1085 42.727 99.871 115.228 1.00 46.13 N
ATOM 15 C2 C B1085 42.058 101.083 115.453 1.00 46.84 C
ATOM 16 O2 C B1085 42.278 102.050 114.702 1.00 47.14 O
ATOM 17 N3 C B1085 41.195 101.174 116.486 1.00 47.66 N
ATOM 18 C4 C B1085 40.996 100.123 117.285 1.00 47.74 C
ATOM 19 N4 C B1085 40.121 100.252 118.279 1.00 48.65 N
ATOM 20 C5 C B1085 41.683 98.892 117.096 1.00 47.73 C
ATOM 21 C6 C B1085 42.531 98.810 116.066 1.00 46.51 C
ATOM 22 P C B1086 47.299 99.600 111.383 1.00 47.90 P
ATOM 23 OP1 C B1086 47.204 100.299 110.076 1.00 48.89 O
ATOM 24 OP2 C B1086 47.824 98.214 111.431 1.00 49.13 O
ATOM 25 O5' C B1086 48.170 100.520 112.341 1.00 47.08 O
TER
Atoms:
C4: (44.607,103.822,110.921)
N3: (44.360,105.093,111.366)
OP1: (49.265,101.537,117.784)
OP2: (47.943,100.325,115.942)
C2: (44.582,105.584,112.624)
C1': (45.379,105.178,114.883)
C3': (45.721,104.821,117.174)
O5': (47.679,102.799,116.331)
O4': (46.770,105.278,115.083)
C5': (48.145,104.099,116.695)
P: (48.648,101.542,116.431)
C4': (47.057,105.124,116.502)
C2': (44.874,104.302,116.022)
O2': (43.497,104.525,116.226)
N1: (45.123,104.683,113.523)
O4: (44.346,103.541,109.755)
O2: (44.318,106.734,112.919)
C6: (45.399,103.388,113.144)
C5: (45.163,102.935,111.907)
O3': (45.164,106.036,117.622)
N3: (44.360,105.093,111.366)
OP1: (49.265,101.537,117.784)
OP2: (47.943,100.325,115.942)
C2: (44.582,105.584,112.624)
C1': (45.379,105.178,114.883)
C3': (45.721,104.821,117.174)
O5': (47.679,102.799,116.331)
O4': (46.770,105.278,115.083)
C5': (48.145,104.099,116.695)
P: (48.648,101.542,116.431)
C4': (47.057,105.124,116.502)
C2': (44.874,104.302,116.022)
O2': (43.497,104.525,116.226)
N1: (45.123,104.683,113.523)
O4: (44.346,103.541,109.755)
O2: (44.318,106.734,112.919)
C6: (45.399,103.388,113.144)
C5: (45.163,102.935,111.907)
O3': (45.164,106.036,117.622)
C2: (42.058,101.083,115.453)
OP1: (45.056,94.176,115.367)
OP2: (43.807,95.636,117.069)
C4: (40.996,100.123,117.285)
O5': (44.335,96.532,114.818)
C3': (45.572,98.743,113.182)
C1': (43.624,99.750,114.066)
O4': (43.200,98.635,113.311)
C5': (44.312,96.499,113.381)
P: (44.038,95.215,115.665)
O2: (42.278,102.050,114.702)
C4': (44.354,97.901,112.822)
C2': (45.088,99.501,114.419)
O2': (45.754,100.725,114.669)
N1: (42.727,99.871,115.228)
N3: (41.195,101.174,116.486)
N4: (40.121,100.252,118.279)
C6: (42.531,98.810,116.066)
C5: (41.683,98.892,117.096)
O3': (45.846,99.616,112.081)
OP1: (45.056,94.176,115.367)
OP2: (43.807,95.636,117.069)
C4: (40.996,100.123,117.285)
O5': (44.335,96.532,114.818)
C3': (45.572,98.743,113.182)
C1': (43.624,99.750,114.066)
O4': (43.200,98.635,113.311)
C5': (44.312,96.499,113.381)
P: (44.038,95.215,115.665)
O2: (42.278,102.050,114.702)
C4': (44.354,97.901,112.822)
C2': (45.088,99.501,114.419)
O2': (45.754,100.725,114.669)
N1: (42.727,99.871,115.228)
N3: (41.195,101.174,116.486)
N4: (40.121,100.252,118.279)
C6: (42.531,98.810,116.066)
C5: (41.683,98.892,117.096)
O3': (45.846,99.616,112.081)
Image (generated by PyMOL):