Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:01087:01085
Extra
PDB:
ATOM 1 O3' C A1086 49.251 101.371 115.323 1.00 51.31 O
ATOM 2 P U A1087 48.046 101.089 116.359 1.00 50.59 P
ATOM 3 OP1 U A1087 48.607 101.104 117.731 1.00 52.01 O
ATOM 4 OP2 U A1087 47.327 99.884 115.882 1.00 48.27 O
ATOM 5 O5' U A1087 47.104 102.362 116.222 1.00 49.70 O
ATOM 6 C5' U A1087 47.577 103.665 116.581 1.00 49.79 C
ATOM 7 C4' U A1087 46.486 104.686 116.388 1.00 52.24 C
ATOM 8 O4' U A1087 46.199 104.825 114.966 1.00 53.61 O
ATOM 9 C3' U A1087 45.152 104.354 117.054 1.00 53.33 C
ATOM 10 O3' U A1087 44.541 105.552 117.491 1.00 54.30 O
ATOM 11 C2' U A1087 44.340 103.781 115.900 1.00 53.74 C
ATOM 12 O2' U A1087 42.946 103.888 116.082 1.00 55.06 O
ATOM 13 C1' U A1087 44.811 104.674 114.760 1.00 52.79 C
ATOM 14 N1 U A1087 44.568 104.175 113.398 1.00 52.12 N
ATOM 15 C2 U A1087 44.027 105.070 112.483 1.00 51.63 C
ATOM 16 O2 U A1087 43.761 106.228 112.757 1.00 50.61 O
ATOM 17 N3 U A1087 43.807 104.558 111.233 1.00 51.85 N
ATOM 18 C4 U A1087 44.057 103.277 110.806 1.00 52.55 C
ATOM 19 O4 U A1087 43.796 102.976 109.643 1.00 54.71 O
ATOM 20 C5 U A1087 44.615 102.408 111.802 1.00 52.13 C
ATOM 21 C6 U A1087 44.851 102.877 113.032 1.00 52.27 C
ATOM 22 P C A1088 44.497 105.888 119.055 1.00 56.22 P
ATOM 23 OP1 C A1088 43.823 107.208 119.221 1.00 56.73 O
ATOM 24 OP2 C A1088 45.872 105.695 119.589 1.00 55.32 O
ATOM 25 O5' C A1088 43.548 104.755 119.654 1.00 55.35 O
TER
ATOM 1 O3' U B1084 42.162 93.966 114.920 1.00 51.29 O
ATOM 2 P C B1085 43.526 94.578 115.508 1.00 50.58 P
ATOM 3 OP1 C B1085 44.587 93.597 115.170 1.00 50.61 O
ATOM 4 OP2 C B1085 43.315 94.969 116.917 1.00 52.85 O
ATOM 5 O5' C B1085 43.759 95.914 114.675 1.00 51.96 O
ATOM 6 C5' C B1085 43.774 95.888 113.234 1.00 53.15 C
ATOM 7 C4' C B1085 43.783 97.294 112.684 1.00 53.28 C
ATOM 8 O4' C B1085 42.613 98.000 113.183 1.00 53.80 O
ATOM 9 C3' C B1085 44.986 98.157 113.055 1.00 52.62 C
ATOM 10 O3' C B1085 45.251 99.038 111.962 1.00 53.92 O
ATOM 11 C2' C B1085 44.489 98.909 114.290 1.00 52.26 C
ATOM 12 O2' C B1085 45.123 100.154 114.524 1.00 50.79 O
ATOM 13 C1' C B1085 43.016 99.123 113.946 1.00 52.79 C
ATOM 14 N1 C B1085 42.142 99.201 115.130 1.00 52.76 N
ATOM 15 C2 C B1085 41.428 100.382 115.375 1.00 53.60 C
ATOM 16 O2 C B1085 41.597 101.363 114.627 1.00 55.08 O
ATOM 17 N3 C B1085 40.580 100.431 116.428 1.00 53.46 N
ATOM 18 C4 C B1085 40.452 99.373 117.234 1.00 52.30 C
ATOM 19 N4 C B1085 39.602 99.465 118.255 1.00 51.61 N
ATOM 20 C5 C B1085 41.190 98.174 117.027 1.00 52.48 C
ATOM 21 C6 C B1085 42.013 98.130 115.973 1.00 52.69 C
ATOM 22 P C B1086 46.711 99.063 111.286 1.00 53.10 P
ATOM 23 OP1 C B1086 46.597 99.832 110.026 1.00 54.71 O
ATOM 24 OP2 C B1086 47.276 97.685 111.255 1.00 51.17 O
ATOM 25 O5' C B1086 47.561 99.944 112.301 1.00 53.58 O
TER
ATOM 2 P U A1087 48.046 101.089 116.359 1.00 50.59 P
ATOM 3 OP1 U A1087 48.607 101.104 117.731 1.00 52.01 O
ATOM 4 OP2 U A1087 47.327 99.884 115.882 1.00 48.27 O
ATOM 5 O5' U A1087 47.104 102.362 116.222 1.00 49.70 O
ATOM 6 C5' U A1087 47.577 103.665 116.581 1.00 49.79 C
ATOM 7 C4' U A1087 46.486 104.686 116.388 1.00 52.24 C
ATOM 8 O4' U A1087 46.199 104.825 114.966 1.00 53.61 O
ATOM 9 C3' U A1087 45.152 104.354 117.054 1.00 53.33 C
ATOM 10 O3' U A1087 44.541 105.552 117.491 1.00 54.30 O
ATOM 11 C2' U A1087 44.340 103.781 115.900 1.00 53.74 C
ATOM 12 O2' U A1087 42.946 103.888 116.082 1.00 55.06 O
ATOM 13 C1' U A1087 44.811 104.674 114.760 1.00 52.79 C
ATOM 14 N1 U A1087 44.568 104.175 113.398 1.00 52.12 N
ATOM 15 C2 U A1087 44.027 105.070 112.483 1.00 51.63 C
ATOM 16 O2 U A1087 43.761 106.228 112.757 1.00 50.61 O
ATOM 17 N3 U A1087 43.807 104.558 111.233 1.00 51.85 N
ATOM 18 C4 U A1087 44.057 103.277 110.806 1.00 52.55 C
ATOM 19 O4 U A1087 43.796 102.976 109.643 1.00 54.71 O
ATOM 20 C5 U A1087 44.615 102.408 111.802 1.00 52.13 C
ATOM 21 C6 U A1087 44.851 102.877 113.032 1.00 52.27 C
ATOM 22 P C A1088 44.497 105.888 119.055 1.00 56.22 P
ATOM 23 OP1 C A1088 43.823 107.208 119.221 1.00 56.73 O
ATOM 24 OP2 C A1088 45.872 105.695 119.589 1.00 55.32 O
ATOM 25 O5' C A1088 43.548 104.755 119.654 1.00 55.35 O
TER
ATOM 1 O3' U B1084 42.162 93.966 114.920 1.00 51.29 O
ATOM 2 P C B1085 43.526 94.578 115.508 1.00 50.58 P
ATOM 3 OP1 C B1085 44.587 93.597 115.170 1.00 50.61 O
ATOM 4 OP2 C B1085 43.315 94.969 116.917 1.00 52.85 O
ATOM 5 O5' C B1085 43.759 95.914 114.675 1.00 51.96 O
ATOM 6 C5' C B1085 43.774 95.888 113.234 1.00 53.15 C
ATOM 7 C4' C B1085 43.783 97.294 112.684 1.00 53.28 C
ATOM 8 O4' C B1085 42.613 98.000 113.183 1.00 53.80 O
ATOM 9 C3' C B1085 44.986 98.157 113.055 1.00 52.62 C
ATOM 10 O3' C B1085 45.251 99.038 111.962 1.00 53.92 O
ATOM 11 C2' C B1085 44.489 98.909 114.290 1.00 52.26 C
ATOM 12 O2' C B1085 45.123 100.154 114.524 1.00 50.79 O
ATOM 13 C1' C B1085 43.016 99.123 113.946 1.00 52.79 C
ATOM 14 N1 C B1085 42.142 99.201 115.130 1.00 52.76 N
ATOM 15 C2 C B1085 41.428 100.382 115.375 1.00 53.60 C
ATOM 16 O2 C B1085 41.597 101.363 114.627 1.00 55.08 O
ATOM 17 N3 C B1085 40.580 100.431 116.428 1.00 53.46 N
ATOM 18 C4 C B1085 40.452 99.373 117.234 1.00 52.30 C
ATOM 19 N4 C B1085 39.602 99.465 118.255 1.00 51.61 N
ATOM 20 C5 C B1085 41.190 98.174 117.027 1.00 52.48 C
ATOM 21 C6 C B1085 42.013 98.130 115.973 1.00 52.69 C
ATOM 22 P C B1086 46.711 99.063 111.286 1.00 53.10 P
ATOM 23 OP1 C B1086 46.597 99.832 110.026 1.00 54.71 O
ATOM 24 OP2 C B1086 47.276 97.685 111.255 1.00 51.17 O
ATOM 25 O5' C B1086 47.561 99.944 112.301 1.00 53.58 O
TER
Atoms:
C4: (44.057,103.277,110.806)
N3: (43.807,104.558,111.233)
OP1: (48.607,101.104,117.731)
OP2: (47.327,99.884,115.882)
C2: (44.027,105.070,112.483)
C1': (44.811,104.674,114.760)
C3': (45.152,104.354,117.054)
O5': (47.104,102.362,116.222)
O4': (46.199,104.825,114.966)
C5': (47.577,103.665,116.581)
P: (48.046,101.089,116.359)
C4': (46.486,104.686,116.388)
C2': (44.340,103.781,115.900)
O2': (42.946,103.888,116.082)
N1: (44.568,104.175,113.398)
O4: (43.796,102.976,109.643)
O2: (43.761,106.228,112.757)
C6: (44.851,102.877,113.032)
C5: (44.615,102.408,111.802)
O3': (44.541,105.552,117.491)
N3: (43.807,104.558,111.233)
OP1: (48.607,101.104,117.731)
OP2: (47.327,99.884,115.882)
C2: (44.027,105.070,112.483)
C1': (44.811,104.674,114.760)
C3': (45.152,104.354,117.054)
O5': (47.104,102.362,116.222)
O4': (46.199,104.825,114.966)
C5': (47.577,103.665,116.581)
P: (48.046,101.089,116.359)
C4': (46.486,104.686,116.388)
C2': (44.340,103.781,115.900)
O2': (42.946,103.888,116.082)
N1: (44.568,104.175,113.398)
O4: (43.796,102.976,109.643)
O2: (43.761,106.228,112.757)
C6: (44.851,102.877,113.032)
C5: (44.615,102.408,111.802)
O3': (44.541,105.552,117.491)
C2: (41.428,100.382,115.375)
OP1: (44.587,93.597,115.170)
OP2: (43.315,94.969,116.917)
C4: (40.452,99.373,117.234)
O5': (43.759,95.914,114.675)
C3': (44.986,98.157,113.055)
C1': (43.016,99.123,113.946)
O4': (42.613,98.000,113.183)
C5': (43.774,95.888,113.234)
P: (43.526,94.578,115.508)
O2: (41.597,101.363,114.627)
C4': (43.783,97.294,112.684)
C2': (44.489,98.909,114.290)
O2': (45.123,100.154,114.524)
N1: (42.142,99.201,115.130)
N3: (40.580,100.431,116.428)
N4: (39.602,99.465,118.255)
C6: (42.013,98.130,115.973)
C5: (41.190,98.174,117.027)
O3': (45.251,99.038,111.962)
OP1: (44.587,93.597,115.170)
OP2: (43.315,94.969,116.917)
C4: (40.452,99.373,117.234)
O5': (43.759,95.914,114.675)
C3': (44.986,98.157,113.055)
C1': (43.016,99.123,113.946)
O4': (42.613,98.000,113.183)
C5': (43.774,95.888,113.234)
P: (43.526,94.578,115.508)
O2: (41.597,101.363,114.627)
C4': (43.783,97.294,112.684)
C2': (44.489,98.909,114.290)
O2': (45.123,100.154,114.524)
N1: (42.142,99.201,115.130)
N3: (40.580,100.431,116.428)
N4: (39.602,99.465,118.255)
C6: (42.013,98.130,115.973)
C5: (41.190,98.174,117.027)
O3': (45.251,99.038,111.962)
Image (generated by PyMOL):