Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:01087:01085
Extra
PDB:
ATOM 1 O3' C A1086 49.325 101.376 115.027 1.00 54.83 O
ATOM 2 P U A1087 48.124 101.078 116.056 1.00 54.06 P
ATOM 3 OP1 U A1087 48.686 101.094 117.430 1.00 55.16 O
ATOM 4 OP2 U A1087 47.404 99.869 115.575 1.00 54.09 O
ATOM 5 O5' U A1087 47.175 102.340 115.906 1.00 54.41 O
ATOM 6 C5' U A1087 47.648 103.650 116.225 1.00 54.59 C
ATOM 7 C4' U A1087 46.544 104.655 116.038 1.00 56.64 C
ATOM 8 O4' U A1087 46.249 104.781 114.618 1.00 57.19 O
ATOM 9 C3' U A1087 45.220 104.304 116.717 1.00 56.92 C
ATOM 10 O3' U A1087 44.606 105.492 117.173 1.00 56.86 O
ATOM 11 C2' U A1087 44.400 103.727 115.569 1.00 57.30 C
ATOM 12 O2' U A1087 43.009 103.843 115.769 1.00 57.95 O
ATOM 13 C1' U A1087 44.863 104.620 114.423 1.00 56.84 C
ATOM 14 N1 U A1087 44.615 104.135 113.058 1.00 56.47 N
ATOM 15 C2 U A1087 44.040 105.032 112.172 1.00 56.48 C
ATOM 16 O2 U A1087 43.747 106.176 112.485 1.00 56.64 O
ATOM 17 N3 U A1087 43.824 104.545 110.907 1.00 56.27 N
ATOM 18 C4 U A1087 44.122 103.283 110.441 1.00 57.29 C
ATOM 19 O4 U A1087 43.882 103.004 109.265 1.00 57.56 O
ATOM 20 C5 U A1087 44.703 102.405 111.419 1.00 57.50 C
ATOM 21 C6 U A1087 44.927 102.852 112.663 1.00 57.06 C
ATOM 22 P C A1088 44.635 105.843 118.733 1.00 60.31 P
ATOM 23 OP1 C A1088 44.011 107.187 118.918 1.00 61.36 O
ATOM 24 OP2 C A1088 46.021 105.605 119.220 1.00 61.38 O
ATOM 25 O5' C A1088 43.687 104.740 119.380 1.00 60.11 O
TER
ATOM 1 O3' U B1084 42.181 94.051 114.610 1.00 55.91 O
ATOM 2 P C B1085 43.548 94.631 115.218 1.00 55.27 P
ATOM 3 OP1 C B1085 44.596 93.631 114.889 1.00 56.36 O
ATOM 4 OP2 C B1085 43.328 95.024 116.631 1.00 56.85 O
ATOM 5 O5' C B1085 43.816 95.960 114.385 1.00 57.99 O
ATOM 6 C5' C B1085 43.832 95.941 112.948 1.00 59.22 C
ATOM 7 C4' C B1085 43.832 97.350 112.406 1.00 60.62 C
ATOM 8 O4' C B1085 42.655 98.038 112.914 1.00 62.36 O
ATOM 9 C3' C B1085 45.028 98.228 112.774 1.00 60.85 C
ATOM 10 O3' C B1085 45.302 99.108 111.681 1.00 59.59 O
ATOM 11 C2' C B1085 44.518 98.992 113.997 1.00 61.67 C
ATOM 12 O2' C B1085 45.137 100.247 114.206 1.00 60.80 O
ATOM 13 C1' C B1085 43.048 99.188 113.641 1.00 62.85 C
ATOM 14 N1 C B1085 42.164 99.311 114.811 1.00 63.56 N
ATOM 15 C2 C B1085 41.505 100.529 115.043 1.00 64.59 C
ATOM 16 O2 C B1085 41.728 101.495 114.289 1.00 64.49 O
ATOM 17 N3 C B1085 40.649 100.624 116.085 1.00 64.82 N
ATOM 18 C4 C B1085 40.453 99.574 116.888 1.00 64.14 C
ATOM 19 N4 C B1085 39.589 99.709 117.893 1.00 65.08 N
ATOM 20 C5 C B1085 41.131 98.337 116.693 1.00 64.20 C
ATOM 21 C6 C B1085 41.967 98.250 115.653 1.00 64.22 C
ATOM 22 P C B1086 46.757 99.096 110.984 1.00 59.12 P
ATOM 23 OP1 C B1086 46.636 99.833 109.698 1.00 60.50 O
ATOM 24 OP2 C B1086 47.295 97.705 110.985 1.00 58.99 O
ATOM 25 O5' C B1086 47.637 99.988 111.963 1.00 57.94 O
TER
ATOM 2 P U A1087 48.124 101.078 116.056 1.00 54.06 P
ATOM 3 OP1 U A1087 48.686 101.094 117.430 1.00 55.16 O
ATOM 4 OP2 U A1087 47.404 99.869 115.575 1.00 54.09 O
ATOM 5 O5' U A1087 47.175 102.340 115.906 1.00 54.41 O
ATOM 6 C5' U A1087 47.648 103.650 116.225 1.00 54.59 C
ATOM 7 C4' U A1087 46.544 104.655 116.038 1.00 56.64 C
ATOM 8 O4' U A1087 46.249 104.781 114.618 1.00 57.19 O
ATOM 9 C3' U A1087 45.220 104.304 116.717 1.00 56.92 C
ATOM 10 O3' U A1087 44.606 105.492 117.173 1.00 56.86 O
ATOM 11 C2' U A1087 44.400 103.727 115.569 1.00 57.30 C
ATOM 12 O2' U A1087 43.009 103.843 115.769 1.00 57.95 O
ATOM 13 C1' U A1087 44.863 104.620 114.423 1.00 56.84 C
ATOM 14 N1 U A1087 44.615 104.135 113.058 1.00 56.47 N
ATOM 15 C2 U A1087 44.040 105.032 112.172 1.00 56.48 C
ATOM 16 O2 U A1087 43.747 106.176 112.485 1.00 56.64 O
ATOM 17 N3 U A1087 43.824 104.545 110.907 1.00 56.27 N
ATOM 18 C4 U A1087 44.122 103.283 110.441 1.00 57.29 C
ATOM 19 O4 U A1087 43.882 103.004 109.265 1.00 57.56 O
ATOM 20 C5 U A1087 44.703 102.405 111.419 1.00 57.50 C
ATOM 21 C6 U A1087 44.927 102.852 112.663 1.00 57.06 C
ATOM 22 P C A1088 44.635 105.843 118.733 1.00 60.31 P
ATOM 23 OP1 C A1088 44.011 107.187 118.918 1.00 61.36 O
ATOM 24 OP2 C A1088 46.021 105.605 119.220 1.00 61.38 O
ATOM 25 O5' C A1088 43.687 104.740 119.380 1.00 60.11 O
TER
ATOM 1 O3' U B1084 42.181 94.051 114.610 1.00 55.91 O
ATOM 2 P C B1085 43.548 94.631 115.218 1.00 55.27 P
ATOM 3 OP1 C B1085 44.596 93.631 114.889 1.00 56.36 O
ATOM 4 OP2 C B1085 43.328 95.024 116.631 1.00 56.85 O
ATOM 5 O5' C B1085 43.816 95.960 114.385 1.00 57.99 O
ATOM 6 C5' C B1085 43.832 95.941 112.948 1.00 59.22 C
ATOM 7 C4' C B1085 43.832 97.350 112.406 1.00 60.62 C
ATOM 8 O4' C B1085 42.655 98.038 112.914 1.00 62.36 O
ATOM 9 C3' C B1085 45.028 98.228 112.774 1.00 60.85 C
ATOM 10 O3' C B1085 45.302 99.108 111.681 1.00 59.59 O
ATOM 11 C2' C B1085 44.518 98.992 113.997 1.00 61.67 C
ATOM 12 O2' C B1085 45.137 100.247 114.206 1.00 60.80 O
ATOM 13 C1' C B1085 43.048 99.188 113.641 1.00 62.85 C
ATOM 14 N1 C B1085 42.164 99.311 114.811 1.00 63.56 N
ATOM 15 C2 C B1085 41.505 100.529 115.043 1.00 64.59 C
ATOM 16 O2 C B1085 41.728 101.495 114.289 1.00 64.49 O
ATOM 17 N3 C B1085 40.649 100.624 116.085 1.00 64.82 N
ATOM 18 C4 C B1085 40.453 99.574 116.888 1.00 64.14 C
ATOM 19 N4 C B1085 39.589 99.709 117.893 1.00 65.08 N
ATOM 20 C5 C B1085 41.131 98.337 116.693 1.00 64.20 C
ATOM 21 C6 C B1085 41.967 98.250 115.653 1.00 64.22 C
ATOM 22 P C B1086 46.757 99.096 110.984 1.00 59.12 P
ATOM 23 OP1 C B1086 46.636 99.833 109.698 1.00 60.50 O
ATOM 24 OP2 C B1086 47.295 97.705 110.985 1.00 58.99 O
ATOM 25 O5' C B1086 47.637 99.988 111.963 1.00 57.94 O
TER
Atoms:
C4: (44.122,103.283,110.441)
N3: (43.824,104.545,110.907)
OP1: (48.686,101.094,117.430)
OP2: (47.404,99.869,115.575)
C2: (44.040,105.032,112.172)
C1': (44.863,104.620,114.423)
C3': (45.220,104.304,116.717)
O5': (47.175,102.340,115.906)
O4': (46.249,104.781,114.618)
C5': (47.648,103.650,116.225)
P: (48.124,101.078,116.056)
C4': (46.544,104.655,116.038)
C2': (44.400,103.727,115.569)
O2': (43.009,103.843,115.769)
N1: (44.615,104.135,113.058)
O4: (43.882,103.004,109.265)
O2: (43.747,106.176,112.485)
C6: (44.927,102.852,112.663)
C5: (44.703,102.405,111.419)
O3': (44.606,105.492,117.173)
N3: (43.824,104.545,110.907)
OP1: (48.686,101.094,117.430)
OP2: (47.404,99.869,115.575)
C2: (44.040,105.032,112.172)
C1': (44.863,104.620,114.423)
C3': (45.220,104.304,116.717)
O5': (47.175,102.340,115.906)
O4': (46.249,104.781,114.618)
C5': (47.648,103.650,116.225)
P: (48.124,101.078,116.056)
C4': (46.544,104.655,116.038)
C2': (44.400,103.727,115.569)
O2': (43.009,103.843,115.769)
N1: (44.615,104.135,113.058)
O4: (43.882,103.004,109.265)
O2: (43.747,106.176,112.485)
C6: (44.927,102.852,112.663)
C5: (44.703,102.405,111.419)
O3': (44.606,105.492,117.173)
C2: (41.505,100.529,115.043)
OP1: (44.596,93.631,114.889)
OP2: (43.328,95.024,116.631)
C4: (40.453,99.574,116.888)
O5': (43.816,95.960,114.385)
C3': (45.028,98.228,112.774)
C1': (43.048,99.188,113.641)
O4': (42.655,98.038,112.914)
C5': (43.832,95.941,112.948)
P: (43.548,94.631,115.218)
O2: (41.728,101.495,114.289)
C4': (43.832,97.350,112.406)
C2': (44.518,98.992,113.997)
O2': (45.137,100.247,114.206)
N1: (42.164,99.311,114.811)
N3: (40.649,100.624,116.085)
N4: (39.589,99.709,117.893)
C6: (41.967,98.250,115.653)
C5: (41.131,98.337,116.693)
O3': (45.302,99.108,111.681)
OP1: (44.596,93.631,114.889)
OP2: (43.328,95.024,116.631)
C4: (40.453,99.574,116.888)
O5': (43.816,95.960,114.385)
C3': (45.028,98.228,112.774)
C1': (43.048,99.188,113.641)
O4': (42.655,98.038,112.914)
C5': (43.832,95.941,112.948)
P: (43.548,94.631,115.218)
O2: (41.728,101.495,114.289)
C4': (43.832,97.350,112.406)
C2': (44.518,98.992,113.997)
O2': (45.137,100.247,114.206)
N1: (42.164,99.311,114.811)
N3: (40.649,100.624,116.085)
N4: (39.589,99.709,117.893)
C6: (41.967,98.250,115.653)
C5: (41.131,98.337,116.693)
O3': (45.302,99.108,111.681)
Image (generated by PyMOL):