Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0827:02488
Extra
PDB:
ATOM 1 O3' C A 826 63.009 142.964 90.878 1.00 33.64 O
ATOM 2 P U A 827 61.459 143.321 91.119 1.00 34.51 P
ATOM 3 OP1 U A 827 61.310 144.068 92.398 1.00 35.64 O
ATOM 4 OP2 U A 827 60.699 142.057 90.913 1.00 36.62 O
ATOM 5 O5' U A 827 61.094 144.310 89.925 1.00 30.99 O
ATOM 6 C5' U A 827 61.350 143.947 88.552 1.00 29.94 C
ATOM 7 C4' U A 827 60.121 144.199 87.712 1.00 32.16 C
ATOM 8 O4' U A 827 59.103 143.220 88.030 1.00 32.45 O
ATOM 9 C3' U A 827 59.441 145.546 87.916 1.00 31.54 C
ATOM 10 O3' U A 827 60.071 146.515 87.084 1.00 30.31 O
ATOM 11 C2' U A 827 58.002 145.276 87.476 1.00 33.71 C
ATOM 12 O2' U A 827 57.821 145.439 86.088 1.00 37.08 O
ATOM 13 C1' U A 827 57.825 143.792 87.828 1.00 33.04 C
ATOM 14 N1 U A 827 56.972 143.471 88.983 1.00 34.06 N
ATOM 15 C2 U A 827 55.614 143.758 88.896 1.00 33.08 C
ATOM 16 O2 U A 827 55.106 144.300 87.930 1.00 34.29 O
ATOM 17 N3 U A 827 54.873 143.388 89.989 1.00 34.16 N
ATOM 18 C4 U A 827 55.337 142.795 91.147 1.00 36.03 C
ATOM 19 O4 U A 827 54.542 142.524 92.053 1.00 35.37 O
ATOM 20 C5 U A 827 56.751 142.551 91.167 1.00 34.57 C
ATOM 21 C6 U A 827 57.498 142.887 90.115 1.00 32.87 C
ATOM 22 P A A 828 59.630 148.060 87.152 1.00 32.40 P
ATOM 23 OP1 A A 828 58.594 148.246 88.192 1.00 32.57 O
ATOM 24 OP2 A A 828 59.367 148.526 85.771 1.00 31.30 O
ATOM 25 O5' A A 828 60.956 148.777 87.652 1.00 32.97 O
TER
ATOM 1 O3' G B2487 64.372 140.609 94.817 1.00 36.80 O
ATOM 2 P C B2488 63.341 141.253 95.855 1.00 39.11 P
ATOM 3 OP1 C B2488 63.430 142.723 95.720 1.00 38.38 O
ATOM 4 OP2 C B2488 63.589 140.625 97.169 1.00 41.62 O
ATOM 5 O5' C B2488 61.920 140.737 95.358 1.00 36.93 O
ATOM 6 C5' C B2488 61.324 141.206 94.129 1.00 36.65 C
ATOM 7 C4' C B2488 59.875 140.777 94.081 1.00 37.18 C
ATOM 8 O4' C B2488 59.805 139.329 94.003 1.00 37.62 O
ATOM 9 C3' C B2488 59.106 141.111 95.349 1.00 37.16 C
ATOM 10 O3' C B2488 58.601 142.431 95.304 1.00 36.97 O
ATOM 11 C2' C B2488 57.992 140.077 95.346 1.00 36.94 C
ATOM 12 O2' C B2488 56.931 140.419 94.476 1.00 39.77 O
ATOM 13 C1' C B2488 58.726 138.857 94.791 1.00 36.67 C
ATOM 14 N1 C B2488 59.242 137.923 95.819 1.00 37.69 N
ATOM 15 C2 C B2488 58.349 137.001 96.390 1.00 38.63 C
ATOM 16 O2 C B2488 57.154 137.047 96.067 1.00 41.26 O
ATOM 17 N3 C B2488 58.806 136.091 97.281 1.00 38.22 N
ATOM 18 C4 C B2488 60.090 136.078 97.621 1.00 37.49 C
ATOM 19 N4 C B2488 60.494 135.128 98.469 1.00 35.42 N
ATOM 20 C5 C B2488 61.020 137.030 97.095 1.00 36.51 C
ATOM 21 C6 C B2488 60.556 137.928 96.203 1.00 36.42 C
ATOM 22 P U B2489 58.603 143.330 96.625 1.00 35.33 P
ATOM 23 OP1 U B2489 59.589 144.421 96.413 1.00 37.84 O
ATOM 24 OP2 U B2489 58.717 142.458 97.820 1.00 39.30 O
ATOM 25 O5' U B2489 57.167 143.996 96.612 1.00 34.67 O
TER
ATOM 2 P U A 827 61.459 143.321 91.119 1.00 34.51 P
ATOM 3 OP1 U A 827 61.310 144.068 92.398 1.00 35.64 O
ATOM 4 OP2 U A 827 60.699 142.057 90.913 1.00 36.62 O
ATOM 5 O5' U A 827 61.094 144.310 89.925 1.00 30.99 O
ATOM 6 C5' U A 827 61.350 143.947 88.552 1.00 29.94 C
ATOM 7 C4' U A 827 60.121 144.199 87.712 1.00 32.16 C
ATOM 8 O4' U A 827 59.103 143.220 88.030 1.00 32.45 O
ATOM 9 C3' U A 827 59.441 145.546 87.916 1.00 31.54 C
ATOM 10 O3' U A 827 60.071 146.515 87.084 1.00 30.31 O
ATOM 11 C2' U A 827 58.002 145.276 87.476 1.00 33.71 C
ATOM 12 O2' U A 827 57.821 145.439 86.088 1.00 37.08 O
ATOM 13 C1' U A 827 57.825 143.792 87.828 1.00 33.04 C
ATOM 14 N1 U A 827 56.972 143.471 88.983 1.00 34.06 N
ATOM 15 C2 U A 827 55.614 143.758 88.896 1.00 33.08 C
ATOM 16 O2 U A 827 55.106 144.300 87.930 1.00 34.29 O
ATOM 17 N3 U A 827 54.873 143.388 89.989 1.00 34.16 N
ATOM 18 C4 U A 827 55.337 142.795 91.147 1.00 36.03 C
ATOM 19 O4 U A 827 54.542 142.524 92.053 1.00 35.37 O
ATOM 20 C5 U A 827 56.751 142.551 91.167 1.00 34.57 C
ATOM 21 C6 U A 827 57.498 142.887 90.115 1.00 32.87 C
ATOM 22 P A A 828 59.630 148.060 87.152 1.00 32.40 P
ATOM 23 OP1 A A 828 58.594 148.246 88.192 1.00 32.57 O
ATOM 24 OP2 A A 828 59.367 148.526 85.771 1.00 31.30 O
ATOM 25 O5' A A 828 60.956 148.777 87.652 1.00 32.97 O
TER
ATOM 1 O3' G B2487 64.372 140.609 94.817 1.00 36.80 O
ATOM 2 P C B2488 63.341 141.253 95.855 1.00 39.11 P
ATOM 3 OP1 C B2488 63.430 142.723 95.720 1.00 38.38 O
ATOM 4 OP2 C B2488 63.589 140.625 97.169 1.00 41.62 O
ATOM 5 O5' C B2488 61.920 140.737 95.358 1.00 36.93 O
ATOM 6 C5' C B2488 61.324 141.206 94.129 1.00 36.65 C
ATOM 7 C4' C B2488 59.875 140.777 94.081 1.00 37.18 C
ATOM 8 O4' C B2488 59.805 139.329 94.003 1.00 37.62 O
ATOM 9 C3' C B2488 59.106 141.111 95.349 1.00 37.16 C
ATOM 10 O3' C B2488 58.601 142.431 95.304 1.00 36.97 O
ATOM 11 C2' C B2488 57.992 140.077 95.346 1.00 36.94 C
ATOM 12 O2' C B2488 56.931 140.419 94.476 1.00 39.77 O
ATOM 13 C1' C B2488 58.726 138.857 94.791 1.00 36.67 C
ATOM 14 N1 C B2488 59.242 137.923 95.819 1.00 37.69 N
ATOM 15 C2 C B2488 58.349 137.001 96.390 1.00 38.63 C
ATOM 16 O2 C B2488 57.154 137.047 96.067 1.00 41.26 O
ATOM 17 N3 C B2488 58.806 136.091 97.281 1.00 38.22 N
ATOM 18 C4 C B2488 60.090 136.078 97.621 1.00 37.49 C
ATOM 19 N4 C B2488 60.494 135.128 98.469 1.00 35.42 N
ATOM 20 C5 C B2488 61.020 137.030 97.095 1.00 36.51 C
ATOM 21 C6 C B2488 60.556 137.928 96.203 1.00 36.42 C
ATOM 22 P U B2489 58.603 143.330 96.625 1.00 35.33 P
ATOM 23 OP1 U B2489 59.589 144.421 96.413 1.00 37.84 O
ATOM 24 OP2 U B2489 58.717 142.458 97.820 1.00 39.30 O
ATOM 25 O5' U B2489 57.167 143.996 96.612 1.00 34.67 O
TER
Atoms:
C4: (55.337,142.795,91.147)
N3: (54.873,143.388,89.989)
OP1: (61.310,144.068,92.398)
OP2: (60.699,142.057,90.913)
C2: (55.614,143.758,88.896)
C1': (57.825,143.792,87.828)
C3': (59.441,145.546,87.916)
O5': (61.094,144.310,89.925)
O4': (59.103,143.220,88.030)
C5': (61.350,143.947,88.552)
P: (61.459,143.321,91.119)
C4': (60.121,144.199,87.712)
C2': (58.002,145.276,87.476)
O2': (57.821,145.439,86.088)
N1: (56.972,143.471,88.983)
O4: (54.542,142.524,92.053)
O2: (55.106,144.300,87.930)
C6: (57.498,142.887,90.115)
C5: (56.751,142.551,91.167)
O3': (60.071,146.515,87.084)
N3: (54.873,143.388,89.989)
OP1: (61.310,144.068,92.398)
OP2: (60.699,142.057,90.913)
C2: (55.614,143.758,88.896)
C1': (57.825,143.792,87.828)
C3': (59.441,145.546,87.916)
O5': (61.094,144.310,89.925)
O4': (59.103,143.220,88.030)
C5': (61.350,143.947,88.552)
P: (61.459,143.321,91.119)
C4': (60.121,144.199,87.712)
C2': (58.002,145.276,87.476)
O2': (57.821,145.439,86.088)
N1: (56.972,143.471,88.983)
O4: (54.542,142.524,92.053)
O2: (55.106,144.300,87.930)
C6: (57.498,142.887,90.115)
C5: (56.751,142.551,91.167)
O3': (60.071,146.515,87.084)
C2: (58.349,137.001,96.390)
OP1: (63.430,142.723,95.720)
OP2: (63.589,140.625,97.169)
C4: (60.090,136.078,97.621)
O5': (61.920,140.737,95.358)
C3': (59.106,141.111,95.349)
C1': (58.726,138.857,94.791)
O4': (59.805,139.329,94.003)
C5': (61.324,141.206,94.129)
P: (63.341,141.253,95.855)
O2: (57.154,137.047,96.067)
C4': (59.875,140.777,94.081)
C2': (57.992,140.077,95.346)
O2': (56.931,140.419,94.476)
N1: (59.242,137.923,95.819)
N3: (58.806,136.091,97.281)
N4: (60.494,135.128,98.469)
C6: (60.556,137.928,96.203)
C5: (61.020,137.030,97.095)
O3': (58.601,142.431,95.304)
OP1: (63.430,142.723,95.720)
OP2: (63.589,140.625,97.169)
C4: (60.090,136.078,97.621)
O5': (61.920,140.737,95.358)
C3': (59.106,141.111,95.349)
C1': (58.726,138.857,94.791)
O4': (59.805,139.329,94.003)
C5': (61.324,141.206,94.129)
P: (63.341,141.253,95.855)
O2: (57.154,137.047,96.067)
C4': (59.875,140.777,94.081)
C2': (57.992,140.077,95.346)
O2': (56.931,140.419,94.476)
N1: (59.242,137.923,95.819)
N3: (58.806,136.091,97.281)
N4: (60.494,135.128,98.469)
C6: (60.556,137.928,96.203)
C5: (61.020,137.030,97.095)
O3': (58.601,142.431,95.304)
Image (generated by PyMOL):