Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:01223:0553
Extra
PDB:
ATOM 1 O3' C A1222 7.754 88.010 97.867 1.00 46.20 O
ATOM 2 P U A1223 7.406 88.188 96.316 1.00 45.60 P
ATOM 3 OP1 U A1223 6.576 87.021 95.902 1.00 47.77 O
ATOM 4 OP2 U A1223 8.658 88.484 95.585 1.00 46.53 O
ATOM 5 O5' U A1223 6.512 89.501 96.310 1.00 44.50 O
ATOM 6 C5' U A1223 5.226 89.493 96.931 1.00 45.03 C
ATOM 7 C4' U A1223 4.630 90.871 96.925 1.00 46.14 C
ATOM 8 O4' U A1223 5.452 91.757 97.725 1.00 47.83 O
ATOM 9 C3' U A1223 4.568 91.571 95.582 1.00 46.99 C
ATOM 10 O3' U A1223 3.490 91.104 94.786 1.00 49.72 O
ATOM 11 C2' U A1223 4.427 93.032 95.993 1.00 46.38 C
ATOM 12 O2' U A1223 3.131 93.409 96.387 1.00 43.20 O
ATOM 13 C1' U A1223 5.343 93.083 97.217 1.00 47.33 C
ATOM 14 N1 U A1223 6.682 93.591 96.873 1.00 45.83 N
ATOM 15 C2 U A1223 6.854 94.962 96.887 1.00 45.24 C
ATOM 16 O2 U A1223 5.976 95.732 97.228 1.00 44.71 O
ATOM 17 N3 U A1223 8.090 95.398 96.486 1.00 44.89 N
ATOM 18 C4 U A1223 9.153 94.618 96.095 1.00 44.43 C
ATOM 19 O4 U A1223 10.198 95.162 95.741 1.00 45.33 O
ATOM 20 C5 U A1223 8.914 93.204 96.147 1.00 42.83 C
ATOM 21 C6 U A1223 7.719 92.751 96.524 1.00 42.15 C
ATOM 22 P G A1224 3.499 91.373 93.202 1.00 51.81 P
ATOM 23 OP1 G A1224 2.422 90.535 92.609 1.00 52.38 O
ATOM 24 OP2 G A1224 4.890 91.224 92.707 1.00 53.38 O
ATOM 25 O5' G A1224 3.057 92.902 93.080 1.00 48.72 O
TER
ATOM 1 O3' G B 552 -5.868 93.622 97.223 1.00 51.76 O
ATOM 2 P A B 553 -5.321 92.715 98.430 1.00 53.69 P
ATOM 3 OP1 A B 553 -5.843 91.340 98.221 1.00 50.23 O
ATOM 4 OP2 A B 553 -5.526 93.400 99.733 1.00 48.76 O
ATOM 5 O5' A B 553 -3.754 92.635 98.138 1.00 54.24 O
ATOM 6 C5' A B 553 -3.266 91.865 97.016 1.00 53.41 C
ATOM 7 C4' A B 553 -1.775 92.027 96.863 1.00 52.10 C
ATOM 8 O4' A B 553 -1.446 93.364 96.410 1.00 52.53 O
ATOM 9 C3' A B 553 -0.971 91.870 98.135 1.00 51.22 C
ATOM 10 O3' A B 553 -0.796 90.496 98.443 1.00 50.76 O
ATOM 11 C2' A B 553 0.333 92.567 97.772 1.00 49.17 C
ATOM 12 O2' A B 553 1.161 91.753 96.968 1.00 49.54 O
ATOM 13 C1' A B 553 -0.177 93.732 96.922 1.00 48.80 C
ATOM 14 N9 A B 553 -0.312 94.997 97.646 1.00 47.72 N
ATOM 15 C8 A B 553 -1.450 95.595 98.118 1.00 45.58 C
ATOM 16 N7 A B 553 -1.233 96.748 98.709 1.00 47.76 N
ATOM 17 C5 A B 553 0.140 96.918 98.620 1.00 46.10 C
ATOM 18 C6 A B 553 1.002 97.953 99.042 1.00 46.53 C
ATOM 19 N6 A B 553 0.595 99.065 99.655 1.00 47.00 N
ATOM 20 N1 A B 553 2.318 97.807 98.800 1.00 46.42 N
ATOM 21 C2 A B 553 2.735 96.704 98.171 1.00 46.76 C
ATOM 22 N3 A B 553 2.029 95.674 97.716 1.00 47.11 N
ATOM 23 C4 A B 553 0.721 95.844 97.976 1.00 47.34 C
ATOM 24 P A B 554 -0.899 90.007 99.965 1.00 49.83 P
ATOM 25 OP1 A B 554 -1.183 88.542 99.911 1.00 49.49 O
ATOM 26 OP2 A B 554 -1.810 90.923 100.713 1.00 48.35 O
ATOM 27 O5' A B 554 0.564 90.233 100.548 1.00 50.59 O
TER
ATOM 2 P U A1223 7.406 88.188 96.316 1.00 45.60 P
ATOM 3 OP1 U A1223 6.576 87.021 95.902 1.00 47.77 O
ATOM 4 OP2 U A1223 8.658 88.484 95.585 1.00 46.53 O
ATOM 5 O5' U A1223 6.512 89.501 96.310 1.00 44.50 O
ATOM 6 C5' U A1223 5.226 89.493 96.931 1.00 45.03 C
ATOM 7 C4' U A1223 4.630 90.871 96.925 1.00 46.14 C
ATOM 8 O4' U A1223 5.452 91.757 97.725 1.00 47.83 O
ATOM 9 C3' U A1223 4.568 91.571 95.582 1.00 46.99 C
ATOM 10 O3' U A1223 3.490 91.104 94.786 1.00 49.72 O
ATOM 11 C2' U A1223 4.427 93.032 95.993 1.00 46.38 C
ATOM 12 O2' U A1223 3.131 93.409 96.387 1.00 43.20 O
ATOM 13 C1' U A1223 5.343 93.083 97.217 1.00 47.33 C
ATOM 14 N1 U A1223 6.682 93.591 96.873 1.00 45.83 N
ATOM 15 C2 U A1223 6.854 94.962 96.887 1.00 45.24 C
ATOM 16 O2 U A1223 5.976 95.732 97.228 1.00 44.71 O
ATOM 17 N3 U A1223 8.090 95.398 96.486 1.00 44.89 N
ATOM 18 C4 U A1223 9.153 94.618 96.095 1.00 44.43 C
ATOM 19 O4 U A1223 10.198 95.162 95.741 1.00 45.33 O
ATOM 20 C5 U A1223 8.914 93.204 96.147 1.00 42.83 C
ATOM 21 C6 U A1223 7.719 92.751 96.524 1.00 42.15 C
ATOM 22 P G A1224 3.499 91.373 93.202 1.00 51.81 P
ATOM 23 OP1 G A1224 2.422 90.535 92.609 1.00 52.38 O
ATOM 24 OP2 G A1224 4.890 91.224 92.707 1.00 53.38 O
ATOM 25 O5' G A1224 3.057 92.902 93.080 1.00 48.72 O
TER
ATOM 1 O3' G B 552 -5.868 93.622 97.223 1.00 51.76 O
ATOM 2 P A B 553 -5.321 92.715 98.430 1.00 53.69 P
ATOM 3 OP1 A B 553 -5.843 91.340 98.221 1.00 50.23 O
ATOM 4 OP2 A B 553 -5.526 93.400 99.733 1.00 48.76 O
ATOM 5 O5' A B 553 -3.754 92.635 98.138 1.00 54.24 O
ATOM 6 C5' A B 553 -3.266 91.865 97.016 1.00 53.41 C
ATOM 7 C4' A B 553 -1.775 92.027 96.863 1.00 52.10 C
ATOM 8 O4' A B 553 -1.446 93.364 96.410 1.00 52.53 O
ATOM 9 C3' A B 553 -0.971 91.870 98.135 1.00 51.22 C
ATOM 10 O3' A B 553 -0.796 90.496 98.443 1.00 50.76 O
ATOM 11 C2' A B 553 0.333 92.567 97.772 1.00 49.17 C
ATOM 12 O2' A B 553 1.161 91.753 96.968 1.00 49.54 O
ATOM 13 C1' A B 553 -0.177 93.732 96.922 1.00 48.80 C
ATOM 14 N9 A B 553 -0.312 94.997 97.646 1.00 47.72 N
ATOM 15 C8 A B 553 -1.450 95.595 98.118 1.00 45.58 C
ATOM 16 N7 A B 553 -1.233 96.748 98.709 1.00 47.76 N
ATOM 17 C5 A B 553 0.140 96.918 98.620 1.00 46.10 C
ATOM 18 C6 A B 553 1.002 97.953 99.042 1.00 46.53 C
ATOM 19 N6 A B 553 0.595 99.065 99.655 1.00 47.00 N
ATOM 20 N1 A B 553 2.318 97.807 98.800 1.00 46.42 N
ATOM 21 C2 A B 553 2.735 96.704 98.171 1.00 46.76 C
ATOM 22 N3 A B 553 2.029 95.674 97.716 1.00 47.11 N
ATOM 23 C4 A B 553 0.721 95.844 97.976 1.00 47.34 C
ATOM 24 P A B 554 -0.899 90.007 99.965 1.00 49.83 P
ATOM 25 OP1 A B 554 -1.183 88.542 99.911 1.00 49.49 O
ATOM 26 OP2 A B 554 -1.810 90.923 100.713 1.00 48.35 O
ATOM 27 O5' A B 554 0.564 90.233 100.548 1.00 50.59 O
TER
Atoms:
C4: (9.153,94.618,96.095)
N3: (8.090,95.398,96.486)
OP1: (6.576,87.021,95.902)
OP2: (8.658,88.484,95.585)
C2: (6.854,94.962,96.887)
C1': (5.343,93.083,97.217)
C3': (4.568,91.571,95.582)
O5': (6.512,89.501,96.310)
O4': (5.452,91.757,97.725)
C5': (5.226,89.493,96.931)
P: (7.406,88.188,96.316)
C4': (4.630,90.871,96.925)
C2': (4.427,93.032,95.993)
O2': (3.131,93.409,96.387)
N1: (6.682,93.591,96.873)
O4: (10.198,95.162,95.741)
O2: (5.976,95.732,97.228)
C6: (7.719,92.751,96.524)
C5: (8.914,93.204,96.147)
O3': (3.490,91.104,94.786)
N3: (8.090,95.398,96.486)
OP1: (6.576,87.021,95.902)
OP2: (8.658,88.484,95.585)
C2: (6.854,94.962,96.887)
C1': (5.343,93.083,97.217)
C3': (4.568,91.571,95.582)
O5': (6.512,89.501,96.310)
O4': (5.452,91.757,97.725)
C5': (5.226,89.493,96.931)
P: (7.406,88.188,96.316)
C4': (4.630,90.871,96.925)
C2': (4.427,93.032,95.993)
O2': (3.131,93.409,96.387)
N1: (6.682,93.591,96.873)
O4: (10.198,95.162,95.741)
O2: (5.976,95.732,97.228)
C6: (7.719,92.751,96.524)
C5: (8.914,93.204,96.147)
O3': (3.490,91.104,94.786)
OP1: (-5.843,91.340,98.221)
OP2: (-5.526,93.400,99.733)
C3': (-0.971,91.870,98.135)
C1': (-0.177,93.732,96.922)
C5': (-3.266,91.865,97.016)
O4': (-1.446,93.364,96.410)
C8: (-1.450,95.595,98.118)
O2': (1.161,91.753,96.968)
C6: (1.002,97.953,99.042)
C5: (0.140,96.918,98.620)
C4: (0.721,95.844,97.976)
P: (-5.321,92.715,98.430)
C4': (-1.775,92.027,96.863)
C2': (0.333,92.567,97.772)
C2: (2.735,96.704,98.171)
N1: (2.318,97.807,98.800)
N3: (2.029,95.674,97.716)
N6: (0.595,99.065,99.655)
N7: (-1.233,96.748,98.709)
N9: (-0.312,94.997,97.646)
O5': (-3.754,92.635,98.138)
O3': (-0.796,90.496,98.443)
OP2: (-5.526,93.400,99.733)
C3': (-0.971,91.870,98.135)
C1': (-0.177,93.732,96.922)
C5': (-3.266,91.865,97.016)
O4': (-1.446,93.364,96.410)
C8: (-1.450,95.595,98.118)
O2': (1.161,91.753,96.968)
C6: (1.002,97.953,99.042)
C5: (0.140,96.918,98.620)
C4: (0.721,95.844,97.976)
P: (-5.321,92.715,98.430)
C4': (-1.775,92.027,96.863)
C2': (0.333,92.567,97.772)
C2: (2.735,96.704,98.171)
N1: (2.318,97.807,98.800)
N3: (2.029,95.674,97.716)
N6: (0.595,99.065,99.655)
N7: (-1.233,96.748,98.709)
N9: (-0.312,94.997,97.646)
O5': (-3.754,92.635,98.138)
O3': (-0.796,90.496,98.443)
Image (generated by PyMOL):