ClaRNA

Doublet info:

Details

Nucleotide types: UC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1X9C:D11:A3

Extra

PDB:
ATOM 1 O3' U A 10 27.295 23.102 49.480 1.00 44.33 O
ATOM 2 P U A 11 27.076 24.685 49.405 1.00 49.12 P
ATOM 3 OP1 U A 11 27.133 25.170 50.800 1.00 45.29 O
ATOM 4 OP2 U A 11 25.943 25.079 48.543 1.00 43.41 O
ATOM 5 O5' U A 11 28.417 25.126 48.689 1.00 44.60 O
ATOM 6 C5' U A 11 28.835 26.471 48.657 1.00 44.97 C
ATOM 7 C4' U A 11 29.501 26.731 47.344 1.00 48.17 C
ATOM 8 O4' U A 11 30.612 25.811 47.192 1.00 48.64 O
ATOM 9 C3' U A 11 28.518 26.400 46.225 1.00 46.07 C
ATOM 10 O3' U A 11 28.741 27.353 45.200 1.00 53.88 O
ATOM 11 C2' U A 11 28.856 24.974 45.795 1.00 45.60 C
ATOM 12 O2' U A 11 28.793 24.806 44.400 1.00 56.13 O
ATOM 13 C1' U A 11 30.336 24.903 46.157 1.00 47.23 C
ATOM 14 N1 U A 11 30.964 23.610 46.435 1.00 46.80 N
ATOM 15 C2 U A 11 31.841 23.138 45.478 1.00 44.95 C
ATOM 16 O2 U A 11 32.097 23.754 44.469 1.00 44.23 O
ATOM 17 N3 U A 11 32.409 21.924 45.754 1.00 44.71 N
ATOM 18 C4 U A 11 32.197 21.149 46.875 1.00 48.26 C
ATOM 19 O4 U A 11 32.735 20.043 46.955 1.00 52.46 O
ATOM 20 C5 U A 11 31.285 21.713 47.829 1.00 47.90 C
ATOM 21 C6 U A 11 30.710 22.898 47.577 1.00 49.18 C
ATOM 22 P A A 12 27.533 28.073 44.449 1.00 52.05 P
ATOM 23 OP1 A A 12 27.129 29.205 45.314 1.00 54.04 O
ATOM 24 OP2 A A 12 26.518 27.087 44.009 1.00 54.30 O
ATOM 25 O5' A A 12 28.279 28.648 43.168 1.00 48.01 O
TER

ATOM 1 O3' C B 2 27.866 25.461 55.643 1.00 45.09 O
ATOM 2 P C B 3 27.828 23.867 55.865 1.00 47.17 P
ATOM 3 OP1 C B 3 26.472 23.471 56.319 1.00 49.33 O
ATOM 4 OP2 C B 3 29.018 23.425 56.639 1.00 41.23 O
ATOM 5 O5' C B 3 28.002 23.326 54.386 1.00 48.06 O
ATOM 6 C5' C B 3 28.611 22.089 54.152 1.00 45.31 C
ATOM 7 C4' C B 3 28.660 21.830 52.686 1.00 49.72 C
ATOM 8 O4' C B 3 29.572 22.797 52.115 1.00 50.36 O
ATOM 9 C3' C B 3 29.188 20.451 52.344 1.00 51.92 C
ATOM 10 O3' C B 3 28.209 19.448 52.143 1.00 53.48 O
ATOM 11 C2' C B 3 30.349 20.636 51.374 1.00 48.81 C
ATOM 12 O2' C B 3 29.971 20.305 50.057 1.00 52.66 O
ATOM 13 C1' C B 3 30.584 22.144 51.380 1.00 48.62 C
ATOM 14 N1 C B 3 31.876 22.401 52.031 1.00 49.57 N
ATOM 15 C2 C B 3 33.037 22.100 51.325 1.00 49.00 C
ATOM 16 O2 C B 3 32.934 21.689 50.164 1.00 53.04 O
ATOM 17 N3 C B 3 34.237 22.262 51.918 1.00 48.84 N
ATOM 18 C4 C B 3 34.304 22.716 53.169 1.00 49.08 C
ATOM 19 N4 C B 3 35.513 22.838 53.723 1.00 46.98 N
ATOM 20 C5 C B 3 33.135 23.059 53.907 1.00 48.07 C
ATOM 21 C6 C B 3 31.950 22.891 53.303 1.00 47.55 C
TER

Atoms:
C4: (32.197,21.149,46.875)
N3: (32.409,21.924,45.754)
OP1: (27.133,25.170,50.800)
OP2: (25.943,25.079,48.543)
C2: (31.841,23.138,45.478)
C1': (30.336,24.903,46.157)
C3': (28.518,26.400,46.225)
O5': (28.417,25.126,48.689)
O4': (30.612,25.811,47.192)
C5': (28.835,26.471,48.657)
P: (27.076,24.685,49.405)
C4': (29.501,26.731,47.344)
C2': (28.856,24.974,45.795)
O2': (28.793,24.806,44.400)
N1: (30.964,23.610,46.435)
O4: (32.735,20.043,46.955)
O2: (32.097,23.754,44.469)
C6: (30.710,22.898,47.577)
C5: (31.285,21.713,47.829)
O3': (28.741,27.353,45.200)
C2: (33.037,22.100,51.325)
OP1: (26.472,23.471,56.319)
OP2: (29.018,23.425,56.639)
C4: (34.304,22.716,53.169)
O5': (28.002,23.326,54.386)
C3': (29.188,20.451,52.344)
C1': (30.584,22.144,51.380)
O4': (29.572,22.797,52.115)
C5': (28.611,22.089,54.152)
P: (27.828,23.867,55.865)
O2: (32.934,21.689,50.164)
C4': (28.660,21.830,52.686)
C2': (30.349,20.636,51.374)
O2': (29.971,20.305,50.057)
N1: (31.876,22.401,52.031)
N3: (34.237,22.262,51.918)
N4: (35.513,22.838,53.723)
C6: (31.950,22.891,53.303)
C5: (33.135,23.059,53.907)
O3': (28.209,19.448,52.143)
Image (generated by PyMOL):
PyMOL image
show in jmol