Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y26:X12:X40
Extra
PDB:
ATOM 1 O3' A A 11 28.368 -20.002 0.482 1.00 51.73 O
ATOM 2 P U A 12 29.837 -20.408 0.006 1.00 56.25 P
ATOM 3 OP1 U A 12 30.526 -19.266 -0.607 1.00 53.42 O
ATOM 4 OP2 U A 12 29.707 -21.627 -0.822 1.00 57.37 O
ATOM 5 O5' U A 12 30.558 -20.818 1.361 1.00 53.38 O
ATOM 6 C5' U A 12 30.962 -19.843 2.330 1.00 54.96 C
ATOM 7 C4' U A 12 30.940 -20.420 3.742 1.00 52.89 C
ATOM 8 O4' U A 12 29.543 -20.536 4.174 1.00 55.43 O
ATOM 9 C3' U A 12 31.480 -21.826 3.902 1.00 51.23 C
ATOM 10 O3' U A 12 32.923 -21.887 3.969 1.00 48.52 O
ATOM 11 C2' U A 12 30.807 -22.197 5.237 1.00 52.36 C
ATOM 12 O2' U A 12 31.385 -21.592 6.388 1.00 52.28 O
ATOM 13 C1' U A 12 29.390 -21.662 5.005 1.00 53.79 C
ATOM 14 N1 U A 12 28.426 -22.638 4.375 1.00 52.45 N
ATOM 15 C2 U A 12 27.936 -23.713 5.115 1.00 53.15 C
ATOM 16 O2 U A 12 28.244 -23.967 6.273 1.00 51.32 O
ATOM 17 N3 U A 12 27.085 -24.516 4.431 1.00 51.38 N
ATOM 18 C4 U A 12 26.670 -24.379 3.130 1.00 54.47 C
ATOM 19 O4 U A 12 25.882 -25.184 2.683 1.00 55.29 O
ATOM 20 C5 U A 12 27.179 -23.243 2.411 1.00 55.54 C
ATOM 21 C6 U A 12 28.016 -22.428 3.064 1.00 56.77 C
ATOM 22 P C A 13 33.669 -23.206 3.376 1.00 53.20 P
ATOM 23 OP1 C A 13 35.106 -22.966 3.555 1.00 52.17 O
ATOM 24 OP2 C A 13 33.105 -23.654 2.111 1.00 50.53 O
ATOM 25 O5' C A 13 33.350 -24.342 4.471 1.00 49.70 O
TER
ATOM 1 O3' A B 39 20.205 -22.870 -4.395 1.00 59.58 O
ATOM 2 P C B 40 21.097 -24.136 -4.830 1.00 63.95 P
ATOM 3 OP1 C B 40 21.352 -23.916 -6.278 1.00 67.14 O
ATOM 4 OP2 C B 40 20.472 -25.405 -4.441 1.00 63.64 O
ATOM 5 O5' C B 40 22.448 -23.976 -4.018 1.00 63.14 O
ATOM 6 C5' C B 40 23.237 -22.799 -4.177 1.00 61.60 C
ATOM 7 C4' C B 40 24.167 -22.631 -2.987 1.00 60.73 C
ATOM 8 O4' C B 40 23.336 -22.276 -1.843 1.00 57.21 O
ATOM 9 C3' C B 40 24.981 -23.850 -2.530 1.00 61.42 C
ATOM 10 O3' C B 40 26.222 -23.986 -3.255 1.00 66.43 O
ATOM 11 C2' C B 40 25.253 -23.457 -1.081 1.00 57.78 C
ATOM 12 O2' C B 40 26.353 -22.580 -0.901 1.00 57.68 O
ATOM 13 C1' C B 40 23.955 -22.755 -0.672 1.00 58.68 C
ATOM 14 N1 C B 40 23.016 -23.684 0.017 1.00 57.55 N
ATOM 15 C2 C B 40 23.074 -23.789 1.406 1.00 57.31 C
ATOM 16 O2 C B 40 23.895 -23.093 2.023 1.00 57.10 O
ATOM 17 N3 C B 40 22.221 -24.660 2.033 1.00 56.43 N
ATOM 18 C4 C B 40 21.370 -25.403 1.313 1.00 55.77 C
ATOM 19 N4 C B 40 20.542 -26.238 1.965 1.00 57.26 N
ATOM 20 C5 C B 40 21.298 -25.291 -0.103 1.00 58.33 C
ATOM 21 C6 C B 40 22.143 -24.453 -0.723 1.00 57.98 C
ATOM 22 P C B 41 26.585 -25.268 -4.164 1.00 70.85 P
ATOM 23 OP1 C B 41 25.396 -26.072 -4.535 1.00 72.84 O
ATOM 24 OP2 C B 41 27.774 -25.924 -3.587 1.00 72.86 O
ATOM 25 O5' C B 41 27.065 -24.457 -5.476 1.00 71.14 O
TER
ATOM 2 P U A 12 29.837 -20.408 0.006 1.00 56.25 P
ATOM 3 OP1 U A 12 30.526 -19.266 -0.607 1.00 53.42 O
ATOM 4 OP2 U A 12 29.707 -21.627 -0.822 1.00 57.37 O
ATOM 5 O5' U A 12 30.558 -20.818 1.361 1.00 53.38 O
ATOM 6 C5' U A 12 30.962 -19.843 2.330 1.00 54.96 C
ATOM 7 C4' U A 12 30.940 -20.420 3.742 1.00 52.89 C
ATOM 8 O4' U A 12 29.543 -20.536 4.174 1.00 55.43 O
ATOM 9 C3' U A 12 31.480 -21.826 3.902 1.00 51.23 C
ATOM 10 O3' U A 12 32.923 -21.887 3.969 1.00 48.52 O
ATOM 11 C2' U A 12 30.807 -22.197 5.237 1.00 52.36 C
ATOM 12 O2' U A 12 31.385 -21.592 6.388 1.00 52.28 O
ATOM 13 C1' U A 12 29.390 -21.662 5.005 1.00 53.79 C
ATOM 14 N1 U A 12 28.426 -22.638 4.375 1.00 52.45 N
ATOM 15 C2 U A 12 27.936 -23.713 5.115 1.00 53.15 C
ATOM 16 O2 U A 12 28.244 -23.967 6.273 1.00 51.32 O
ATOM 17 N3 U A 12 27.085 -24.516 4.431 1.00 51.38 N
ATOM 18 C4 U A 12 26.670 -24.379 3.130 1.00 54.47 C
ATOM 19 O4 U A 12 25.882 -25.184 2.683 1.00 55.29 O
ATOM 20 C5 U A 12 27.179 -23.243 2.411 1.00 55.54 C
ATOM 21 C6 U A 12 28.016 -22.428 3.064 1.00 56.77 C
ATOM 22 P C A 13 33.669 -23.206 3.376 1.00 53.20 P
ATOM 23 OP1 C A 13 35.106 -22.966 3.555 1.00 52.17 O
ATOM 24 OP2 C A 13 33.105 -23.654 2.111 1.00 50.53 O
ATOM 25 O5' C A 13 33.350 -24.342 4.471 1.00 49.70 O
TER
ATOM 1 O3' A B 39 20.205 -22.870 -4.395 1.00 59.58 O
ATOM 2 P C B 40 21.097 -24.136 -4.830 1.00 63.95 P
ATOM 3 OP1 C B 40 21.352 -23.916 -6.278 1.00 67.14 O
ATOM 4 OP2 C B 40 20.472 -25.405 -4.441 1.00 63.64 O
ATOM 5 O5' C B 40 22.448 -23.976 -4.018 1.00 63.14 O
ATOM 6 C5' C B 40 23.237 -22.799 -4.177 1.00 61.60 C
ATOM 7 C4' C B 40 24.167 -22.631 -2.987 1.00 60.73 C
ATOM 8 O4' C B 40 23.336 -22.276 -1.843 1.00 57.21 O
ATOM 9 C3' C B 40 24.981 -23.850 -2.530 1.00 61.42 C
ATOM 10 O3' C B 40 26.222 -23.986 -3.255 1.00 66.43 O
ATOM 11 C2' C B 40 25.253 -23.457 -1.081 1.00 57.78 C
ATOM 12 O2' C B 40 26.353 -22.580 -0.901 1.00 57.68 O
ATOM 13 C1' C B 40 23.955 -22.755 -0.672 1.00 58.68 C
ATOM 14 N1 C B 40 23.016 -23.684 0.017 1.00 57.55 N
ATOM 15 C2 C B 40 23.074 -23.789 1.406 1.00 57.31 C
ATOM 16 O2 C B 40 23.895 -23.093 2.023 1.00 57.10 O
ATOM 17 N3 C B 40 22.221 -24.660 2.033 1.00 56.43 N
ATOM 18 C4 C B 40 21.370 -25.403 1.313 1.00 55.77 C
ATOM 19 N4 C B 40 20.542 -26.238 1.965 1.00 57.26 N
ATOM 20 C5 C B 40 21.298 -25.291 -0.103 1.00 58.33 C
ATOM 21 C6 C B 40 22.143 -24.453 -0.723 1.00 57.98 C
ATOM 22 P C B 41 26.585 -25.268 -4.164 1.00 70.85 P
ATOM 23 OP1 C B 41 25.396 -26.072 -4.535 1.00 72.84 O
ATOM 24 OP2 C B 41 27.774 -25.924 -3.587 1.00 72.86 O
ATOM 25 O5' C B 41 27.065 -24.457 -5.476 1.00 71.14 O
TER
Atoms:
C4: (26.670,-24.379,3.130)
N3: (27.085,-24.516,4.431)
OP1: (30.526,-19.266,-0.607)
OP2: (29.707,-21.627,-0.822)
C2: (27.936,-23.713,5.115)
C1': (29.390,-21.662,5.005)
C3': (31.480,-21.826,3.902)
O5': (30.558,-20.818,1.361)
O4': (29.543,-20.536,4.174)
C5': (30.962,-19.843,2.330)
P: (29.837,-20.408,0.006)
C4': (30.940,-20.420,3.742)
C2': (30.807,-22.197,5.237)
O2': (31.385,-21.592,6.388)
N1: (28.426,-22.638,4.375)
O4: (25.882,-25.184,2.683)
O2: (28.244,-23.967,6.273)
C6: (28.016,-22.428,3.064)
C5: (27.179,-23.243,2.411)
O3': (32.923,-21.887,3.969)
N3: (27.085,-24.516,4.431)
OP1: (30.526,-19.266,-0.607)
OP2: (29.707,-21.627,-0.822)
C2: (27.936,-23.713,5.115)
C1': (29.390,-21.662,5.005)
C3': (31.480,-21.826,3.902)
O5': (30.558,-20.818,1.361)
O4': (29.543,-20.536,4.174)
C5': (30.962,-19.843,2.330)
P: (29.837,-20.408,0.006)
C4': (30.940,-20.420,3.742)
C2': (30.807,-22.197,5.237)
O2': (31.385,-21.592,6.388)
N1: (28.426,-22.638,4.375)
O4: (25.882,-25.184,2.683)
O2: (28.244,-23.967,6.273)
C6: (28.016,-22.428,3.064)
C5: (27.179,-23.243,2.411)
O3': (32.923,-21.887,3.969)
C2: (23.074,-23.789,1.406)
OP1: (21.352,-23.916,-6.278)
OP2: (20.472,-25.405,-4.441)
C4: (21.370,-25.403,1.313)
O5': (22.448,-23.976,-4.018)
C3': (24.981,-23.850,-2.530)
C1': (23.955,-22.755,-0.672)
O4': (23.336,-22.276,-1.843)
C5': (23.237,-22.799,-4.177)
P: (21.097,-24.136,-4.830)
O2: (23.895,-23.093,2.023)
C4': (24.167,-22.631,-2.987)
C2': (25.253,-23.457,-1.081)
O2': (26.353,-22.580,-0.901)
N1: (23.016,-23.684,0.017)
N3: (22.221,-24.660,2.033)
N4: (20.542,-26.238,1.965)
C6: (22.143,-24.453,-0.723)
C5: (21.298,-25.291,-0.103)
O3': (26.222,-23.986,-3.255)
OP1: (21.352,-23.916,-6.278)
OP2: (20.472,-25.405,-4.441)
C4: (21.370,-25.403,1.313)
O5': (22.448,-23.976,-4.018)
C3': (24.981,-23.850,-2.530)
C1': (23.955,-22.755,-0.672)
O4': (23.336,-22.276,-1.843)
C5': (23.237,-22.799,-4.177)
P: (21.097,-24.136,-4.830)
O2: (23.895,-23.093,2.023)
C4': (24.167,-22.631,-2.987)
C2': (25.253,-23.457,-1.081)
O2': (26.353,-22.580,-0.901)
N1: (23.016,-23.684,0.017)
N3: (22.221,-24.660,2.033)
N4: (20.542,-26.238,1.965)
C6: (22.143,-24.453,-0.723)
C5: (21.298,-25.291,-0.103)
O3': (26.222,-23.986,-3.255)
Image (generated by PyMOL):