Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y27:X11:X39
Extra
PDB:
ATOM 1 O3' A A 10 8.703 -7.640 25.544 1.00 50.04 O
ATOM 2 P U A 11 9.205 -6.763 26.778 1.00 49.72 P
ATOM 3 OP1 U A 11 10.653 -6.493 26.608 1.00 49.51 O
ATOM 4 OP2 U A 11 8.724 -7.422 28.011 1.00 50.12 O
ATOM 5 O5' U A 11 8.383 -5.409 26.585 1.00 50.26 O
ATOM 6 C5' U A 11 9.011 -4.174 26.250 1.00 50.30 C
ATOM 7 C4' U A 11 7.980 -3.254 25.627 1.00 50.58 C
ATOM 8 O4' U A 11 7.317 -3.921 24.516 1.00 50.31 O
ATOM 9 C3' U A 11 6.834 -2.905 26.558 1.00 50.64 C
ATOM 10 O3' U A 11 7.195 -1.869 27.447 1.00 51.70 O
ATOM 11 C2' U A 11 5.755 -2.493 25.561 1.00 50.45 C
ATOM 12 O2' U A 11 5.905 -1.180 25.045 1.00 50.38 O
ATOM 13 C1' U A 11 5.946 -3.559 24.480 1.00 49.87 C
ATOM 14 N1 U A 11 5.054 -4.768 24.683 1.00 49.74 N
ATOM 15 C2 U A 11 3.692 -4.647 24.454 1.00 49.48 C
ATOM 16 O2 U A 11 3.159 -3.619 24.086 1.00 49.71 O
ATOM 17 N3 U A 11 2.952 -5.787 24.667 1.00 49.48 N
ATOM 18 C4 U A 11 3.416 -7.024 25.076 1.00 49.62 C
ATOM 19 O4 U A 11 2.617 -7.946 25.225 1.00 49.21 O
ATOM 20 C5 U A 11 4.844 -7.088 25.295 1.00 49.77 C
ATOM 21 C6 U A 11 5.586 -5.984 25.096 1.00 50.11 C
ATOM 22 P C A 12 6.673 -1.905 28.963 1.00 52.73 P
ATOM 23 OP1 C A 12 7.216 -0.705 29.643 1.00 53.29 O
ATOM 24 OP2 C A 12 6.960 -3.243 29.519 1.00 52.84 O
ATOM 25 O5' C A 12 5.091 -1.713 28.817 1.00 53.93 O
TER
ATOM 1 O3' A B 38 5.201 -16.676 23.355 1.00 46.53 O
ATOM 2 P C B 39 4.638 -16.498 24.843 1.00 46.01 P
ATOM 3 OP1 C B 39 5.503 -17.295 25.752 1.00 45.52 O
ATOM 4 OP2 C B 39 3.177 -16.735 24.784 1.00 44.35 O
ATOM 5 O5' C B 39 4.913 -14.954 25.158 1.00 45.08 O
ATOM 6 C5' C B 39 6.216 -14.524 25.529 1.00 45.46 C
ATOM 7 C4' C B 39 6.322 -13.016 25.459 1.00 45.80 C
ATOM 8 O4' C B 39 5.892 -12.577 24.145 1.00 46.23 O
ATOM 9 C3' C B 39 5.402 -12.277 26.420 1.00 46.28 C
ATOM 10 O3' C B 39 5.969 -12.185 27.735 1.00 46.56 O
ATOM 11 C2' C B 39 5.218 -10.931 25.721 1.00 45.87 C
ATOM 12 O2' C B 39 6.268 -10.018 25.967 1.00 45.76 O
ATOM 13 C1' C B 39 5.197 -11.347 24.247 1.00 45.48 C
ATOM 14 N1 C B 39 3.797 -11.447 23.698 1.00 45.12 N
ATOM 15 C2 C B 39 3.266 -10.360 22.987 1.00 44.99 C
ATOM 16 O2 C B 39 3.945 -9.344 22.799 1.00 45.58 O
ATOM 17 N3 C B 39 2.005 -10.438 22.508 1.00 45.57 N
ATOM 18 C4 C B 39 1.269 -11.531 22.711 1.00 45.58 C
ATOM 19 N4 C B 39 0.034 -11.535 22.204 1.00 45.19 N
ATOM 20 C5 C B 39 1.776 -12.656 23.434 1.00 45.58 C
ATOM 21 C6 C B 39 3.031 -12.566 23.903 1.00 45.46 C
ATOM 22 P C B 40 5.439 -13.180 28.875 1.00 47.42 P
ATOM 23 OP1 C B 40 4.225 -13.853 28.353 1.00 46.80 O
ATOM 24 OP2 C B 40 5.379 -12.416 30.142 1.00 46.60 O
ATOM 25 O5' C B 40 6.561 -14.318 28.992 1.00 47.28 O
TER
ATOM 2 P U A 11 9.205 -6.763 26.778 1.00 49.72 P
ATOM 3 OP1 U A 11 10.653 -6.493 26.608 1.00 49.51 O
ATOM 4 OP2 U A 11 8.724 -7.422 28.011 1.00 50.12 O
ATOM 5 O5' U A 11 8.383 -5.409 26.585 1.00 50.26 O
ATOM 6 C5' U A 11 9.011 -4.174 26.250 1.00 50.30 C
ATOM 7 C4' U A 11 7.980 -3.254 25.627 1.00 50.58 C
ATOM 8 O4' U A 11 7.317 -3.921 24.516 1.00 50.31 O
ATOM 9 C3' U A 11 6.834 -2.905 26.558 1.00 50.64 C
ATOM 10 O3' U A 11 7.195 -1.869 27.447 1.00 51.70 O
ATOM 11 C2' U A 11 5.755 -2.493 25.561 1.00 50.45 C
ATOM 12 O2' U A 11 5.905 -1.180 25.045 1.00 50.38 O
ATOM 13 C1' U A 11 5.946 -3.559 24.480 1.00 49.87 C
ATOM 14 N1 U A 11 5.054 -4.768 24.683 1.00 49.74 N
ATOM 15 C2 U A 11 3.692 -4.647 24.454 1.00 49.48 C
ATOM 16 O2 U A 11 3.159 -3.619 24.086 1.00 49.71 O
ATOM 17 N3 U A 11 2.952 -5.787 24.667 1.00 49.48 N
ATOM 18 C4 U A 11 3.416 -7.024 25.076 1.00 49.62 C
ATOM 19 O4 U A 11 2.617 -7.946 25.225 1.00 49.21 O
ATOM 20 C5 U A 11 4.844 -7.088 25.295 1.00 49.77 C
ATOM 21 C6 U A 11 5.586 -5.984 25.096 1.00 50.11 C
ATOM 22 P C A 12 6.673 -1.905 28.963 1.00 52.73 P
ATOM 23 OP1 C A 12 7.216 -0.705 29.643 1.00 53.29 O
ATOM 24 OP2 C A 12 6.960 -3.243 29.519 1.00 52.84 O
ATOM 25 O5' C A 12 5.091 -1.713 28.817 1.00 53.93 O
TER
ATOM 1 O3' A B 38 5.201 -16.676 23.355 1.00 46.53 O
ATOM 2 P C B 39 4.638 -16.498 24.843 1.00 46.01 P
ATOM 3 OP1 C B 39 5.503 -17.295 25.752 1.00 45.52 O
ATOM 4 OP2 C B 39 3.177 -16.735 24.784 1.00 44.35 O
ATOM 5 O5' C B 39 4.913 -14.954 25.158 1.00 45.08 O
ATOM 6 C5' C B 39 6.216 -14.524 25.529 1.00 45.46 C
ATOM 7 C4' C B 39 6.322 -13.016 25.459 1.00 45.80 C
ATOM 8 O4' C B 39 5.892 -12.577 24.145 1.00 46.23 O
ATOM 9 C3' C B 39 5.402 -12.277 26.420 1.00 46.28 C
ATOM 10 O3' C B 39 5.969 -12.185 27.735 1.00 46.56 O
ATOM 11 C2' C B 39 5.218 -10.931 25.721 1.00 45.87 C
ATOM 12 O2' C B 39 6.268 -10.018 25.967 1.00 45.76 O
ATOM 13 C1' C B 39 5.197 -11.347 24.247 1.00 45.48 C
ATOM 14 N1 C B 39 3.797 -11.447 23.698 1.00 45.12 N
ATOM 15 C2 C B 39 3.266 -10.360 22.987 1.00 44.99 C
ATOM 16 O2 C B 39 3.945 -9.344 22.799 1.00 45.58 O
ATOM 17 N3 C B 39 2.005 -10.438 22.508 1.00 45.57 N
ATOM 18 C4 C B 39 1.269 -11.531 22.711 1.00 45.58 C
ATOM 19 N4 C B 39 0.034 -11.535 22.204 1.00 45.19 N
ATOM 20 C5 C B 39 1.776 -12.656 23.434 1.00 45.58 C
ATOM 21 C6 C B 39 3.031 -12.566 23.903 1.00 45.46 C
ATOM 22 P C B 40 5.439 -13.180 28.875 1.00 47.42 P
ATOM 23 OP1 C B 40 4.225 -13.853 28.353 1.00 46.80 O
ATOM 24 OP2 C B 40 5.379 -12.416 30.142 1.00 46.60 O
ATOM 25 O5' C B 40 6.561 -14.318 28.992 1.00 47.28 O
TER
Atoms:
C4: (3.416,-7.024,25.076)
N3: (2.952,-5.787,24.667)
OP1: (10.653,-6.493,26.608)
OP2: (8.724,-7.422,28.011)
C2: (3.692,-4.647,24.454)
C1': (5.946,-3.559,24.480)
C3': (6.834,-2.905,26.558)
O5': (8.383,-5.409,26.585)
O4': (7.317,-3.921,24.516)
C5': (9.011,-4.174,26.250)
P: (9.205,-6.763,26.778)
C4': (7.980,-3.254,25.627)
C2': (5.755,-2.493,25.561)
O2': (5.905,-1.180,25.045)
N1: (5.054,-4.768,24.683)
O4: (2.617,-7.946,25.225)
O2: (3.159,-3.619,24.086)
C6: (5.586,-5.984,25.096)
C5: (4.844,-7.088,25.295)
O3': (7.195,-1.869,27.447)
N3: (2.952,-5.787,24.667)
OP1: (10.653,-6.493,26.608)
OP2: (8.724,-7.422,28.011)
C2: (3.692,-4.647,24.454)
C1': (5.946,-3.559,24.480)
C3': (6.834,-2.905,26.558)
O5': (8.383,-5.409,26.585)
O4': (7.317,-3.921,24.516)
C5': (9.011,-4.174,26.250)
P: (9.205,-6.763,26.778)
C4': (7.980,-3.254,25.627)
C2': (5.755,-2.493,25.561)
O2': (5.905,-1.180,25.045)
N1: (5.054,-4.768,24.683)
O4: (2.617,-7.946,25.225)
O2: (3.159,-3.619,24.086)
C6: (5.586,-5.984,25.096)
C5: (4.844,-7.088,25.295)
O3': (7.195,-1.869,27.447)
C2: (3.266,-10.360,22.987)
OP1: (5.503,-17.295,25.752)
OP2: (3.177,-16.735,24.784)
C4: (1.269,-11.531,22.711)
O5': (4.913,-14.954,25.158)
C3': (5.402,-12.277,26.420)
C1': (5.197,-11.347,24.247)
O4': (5.892,-12.577,24.145)
C5': (6.216,-14.524,25.529)
P: (4.638,-16.498,24.843)
O2: (3.945,-9.344,22.799)
C4': (6.322,-13.016,25.459)
C2': (5.218,-10.931,25.721)
O2': (6.268,-10.018,25.967)
N1: (3.797,-11.447,23.698)
N3: (2.005,-10.438,22.508)
N4: (0.034,-11.535,22.204)
C6: (3.031,-12.566,23.903)
C5: (1.776,-12.656,23.434)
O3': (5.969,-12.185,27.735)
OP1: (5.503,-17.295,25.752)
OP2: (3.177,-16.735,24.784)
C4: (1.269,-11.531,22.711)
O5': (4.913,-14.954,25.158)
C3': (5.402,-12.277,26.420)
C1': (5.197,-11.347,24.247)
O4': (5.892,-12.577,24.145)
C5': (6.216,-14.524,25.529)
P: (4.638,-16.498,24.843)
O2: (3.945,-9.344,22.799)
C4': (6.322,-13.016,25.459)
C2': (5.218,-10.931,25.721)
O2': (6.268,-10.018,25.967)
N1: (3.797,-11.447,23.698)
N3: (2.005,-10.438,22.508)
N4: (0.034,-11.535,22.204)
C6: (3.031,-12.566,23.903)
C5: (1.776,-12.656,23.434)
O3': (5.969,-12.185,27.735)
Image (generated by PyMOL):