Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:01087:01085
Extra
PDB:
ATOM 1 O3' C A1086 49.723 101.350 115.027 1.00 42.51 O
ATOM 2 P U A1087 48.555 101.024 116.086 1.00 44.28 P
ATOM 3 OP1 U A1087 49.169 101.027 117.433 1.00 42.65 O
ATOM 4 OP2 U A1087 47.823 99.810 115.613 1.00 41.83 O
ATOM 5 O5' U A1087 47.587 102.282 116.000 1.00 41.41 O
ATOM 6 C5' U A1087 48.063 103.583 116.339 1.00 40.99 C
ATOM 7 C4' U A1087 46.985 104.606 116.111 1.00 42.74 C
ATOM 8 O4' U A1087 46.715 104.702 114.683 1.00 44.29 O
ATOM 9 C3' U A1087 45.643 104.306 116.776 1.00 43.36 C
ATOM 10 O3' U A1087 45.071 105.513 117.238 1.00 43.92 O
ATOM 11 C2' U A1087 44.804 103.781 115.618 1.00 44.43 C
ATOM 12 O2' U A1087 43.421 103.973 115.816 1.00 45.28 O
ATOM 13 C1' U A1087 45.320 104.657 114.482 1.00 43.72 C
ATOM 14 N1 U A1087 45.042 104.201 113.111 1.00 42.61 N
ATOM 15 C2 U A1087 44.492 105.126 112.241 1.00 42.33 C
ATOM 16 O2 U A1087 44.237 106.274 112.567 1.00 43.98 O
ATOM 17 N3 U A1087 44.249 104.663 110.974 1.00 41.53 N
ATOM 18 C4 U A1087 44.489 103.397 110.494 1.00 41.52 C
ATOM 19 O4 U A1087 44.228 103.142 109.318 1.00 40.84 O
ATOM 20 C5 U A1087 45.055 102.490 111.451 1.00 42.93 C
ATOM 21 C6 U A1087 45.308 102.914 112.697 1.00 43.04 C
ATOM 22 P C A1088 45.117 105.854 118.803 1.00 48.63 P
ATOM 23 OP1 C A1088 44.548 107.223 118.993 1.00 46.54 O
ATOM 24 OP2 C A1088 46.497 105.557 119.279 1.00 46.92 O
ATOM 25 O5' C A1088 44.139 104.774 119.455 1.00 47.98 O
TER
ATOM 1 O3' U B1084 42.525 94.144 114.666 1.00 44.42 O
ATOM 2 P C B1085 43.898 94.746 115.232 1.00 46.08 P
ATOM 3 OP1 C B1085 44.939 93.755 114.851 1.00 45.36 O
ATOM 4 OP2 C B1085 43.742 95.133 116.656 1.00 46.35 O
ATOM 5 O5' C B1085 44.112 96.085 114.400 1.00 46.41 O
ATOM 6 C5' C B1085 44.059 96.075 112.961 1.00 48.37 C
ATOM 7 C4' C B1085 44.116 97.486 112.429 1.00 47.94 C
ATOM 8 O4' C B1085 42.987 98.229 112.962 1.00 48.84 O
ATOM 9 C3' C B1085 45.356 98.289 112.795 1.00 47.99 C
ATOM 10 O3' C B1085 45.638 99.180 111.721 1.00 46.18 O
ATOM 11 C2' C B1085 44.915 99.025 114.062 1.00 49.07 C
ATOM 12 O2' C B1085 45.621 100.227 114.325 1.00 49.07 O
ATOM 13 C1' C B1085 43.448 99.311 113.749 1.00 48.59 C
ATOM 14 N1 C B1085 42.573 99.404 114.930 1.00 47.65 N
ATOM 15 C2 C B1085 41.836 100.577 115.141 1.00 48.06 C
ATOM 16 O2 C B1085 41.998 101.546 114.375 1.00 48.11 O
ATOM 17 N3 C B1085 40.972 100.631 116.179 1.00 48.28 N
ATOM 18 C4 C B1085 40.849 99.584 117.002 1.00 47.90 C
ATOM 19 N4 C B1085 39.971 99.676 118.002 1.00 48.84 N
ATOM 20 C5 C B1085 41.615 98.398 116.835 1.00 47.30 C
ATOM 21 C6 C B1085 42.456 98.351 115.797 1.00 47.73 C
ATOM 22 P C B1086 47.084 99.153 111.021 1.00 47.88 P
ATOM 23 OP1 C B1086 46.990 99.937 109.763 1.00 48.07 O
ATOM 24 OP2 C B1086 47.559 97.743 110.975 1.00 45.61 O
ATOM 25 O5' C B1086 47.986 99.986 112.032 1.00 46.00 O
TER
ATOM 2 P U A1087 48.555 101.024 116.086 1.00 44.28 P
ATOM 3 OP1 U A1087 49.169 101.027 117.433 1.00 42.65 O
ATOM 4 OP2 U A1087 47.823 99.810 115.613 1.00 41.83 O
ATOM 5 O5' U A1087 47.587 102.282 116.000 1.00 41.41 O
ATOM 6 C5' U A1087 48.063 103.583 116.339 1.00 40.99 C
ATOM 7 C4' U A1087 46.985 104.606 116.111 1.00 42.74 C
ATOM 8 O4' U A1087 46.715 104.702 114.683 1.00 44.29 O
ATOM 9 C3' U A1087 45.643 104.306 116.776 1.00 43.36 C
ATOM 10 O3' U A1087 45.071 105.513 117.238 1.00 43.92 O
ATOM 11 C2' U A1087 44.804 103.781 115.618 1.00 44.43 C
ATOM 12 O2' U A1087 43.421 103.973 115.816 1.00 45.28 O
ATOM 13 C1' U A1087 45.320 104.657 114.482 1.00 43.72 C
ATOM 14 N1 U A1087 45.042 104.201 113.111 1.00 42.61 N
ATOM 15 C2 U A1087 44.492 105.126 112.241 1.00 42.33 C
ATOM 16 O2 U A1087 44.237 106.274 112.567 1.00 43.98 O
ATOM 17 N3 U A1087 44.249 104.663 110.974 1.00 41.53 N
ATOM 18 C4 U A1087 44.489 103.397 110.494 1.00 41.52 C
ATOM 19 O4 U A1087 44.228 103.142 109.318 1.00 40.84 O
ATOM 20 C5 U A1087 45.055 102.490 111.451 1.00 42.93 C
ATOM 21 C6 U A1087 45.308 102.914 112.697 1.00 43.04 C
ATOM 22 P C A1088 45.117 105.854 118.803 1.00 48.63 P
ATOM 23 OP1 C A1088 44.548 107.223 118.993 1.00 46.54 O
ATOM 24 OP2 C A1088 46.497 105.557 119.279 1.00 46.92 O
ATOM 25 O5' C A1088 44.139 104.774 119.455 1.00 47.98 O
TER
ATOM 1 O3' U B1084 42.525 94.144 114.666 1.00 44.42 O
ATOM 2 P C B1085 43.898 94.746 115.232 1.00 46.08 P
ATOM 3 OP1 C B1085 44.939 93.755 114.851 1.00 45.36 O
ATOM 4 OP2 C B1085 43.742 95.133 116.656 1.00 46.35 O
ATOM 5 O5' C B1085 44.112 96.085 114.400 1.00 46.41 O
ATOM 6 C5' C B1085 44.059 96.075 112.961 1.00 48.37 C
ATOM 7 C4' C B1085 44.116 97.486 112.429 1.00 47.94 C
ATOM 8 O4' C B1085 42.987 98.229 112.962 1.00 48.84 O
ATOM 9 C3' C B1085 45.356 98.289 112.795 1.00 47.99 C
ATOM 10 O3' C B1085 45.638 99.180 111.721 1.00 46.18 O
ATOM 11 C2' C B1085 44.915 99.025 114.062 1.00 49.07 C
ATOM 12 O2' C B1085 45.621 100.227 114.325 1.00 49.07 O
ATOM 13 C1' C B1085 43.448 99.311 113.749 1.00 48.59 C
ATOM 14 N1 C B1085 42.573 99.404 114.930 1.00 47.65 N
ATOM 15 C2 C B1085 41.836 100.577 115.141 1.00 48.06 C
ATOM 16 O2 C B1085 41.998 101.546 114.375 1.00 48.11 O
ATOM 17 N3 C B1085 40.972 100.631 116.179 1.00 48.28 N
ATOM 18 C4 C B1085 40.849 99.584 117.002 1.00 47.90 C
ATOM 19 N4 C B1085 39.971 99.676 118.002 1.00 48.84 N
ATOM 20 C5 C B1085 41.615 98.398 116.835 1.00 47.30 C
ATOM 21 C6 C B1085 42.456 98.351 115.797 1.00 47.73 C
ATOM 22 P C B1086 47.084 99.153 111.021 1.00 47.88 P
ATOM 23 OP1 C B1086 46.990 99.937 109.763 1.00 48.07 O
ATOM 24 OP2 C B1086 47.559 97.743 110.975 1.00 45.61 O
ATOM 25 O5' C B1086 47.986 99.986 112.032 1.00 46.00 O
TER
Atoms:
C4: (44.489,103.397,110.494)
N3: (44.249,104.663,110.974)
OP1: (49.169,101.027,117.433)
OP2: (47.823,99.810,115.613)
C2: (44.492,105.126,112.241)
C1': (45.320,104.657,114.482)
C3': (45.643,104.306,116.776)
O5': (47.587,102.282,116.000)
O4': (46.715,104.702,114.683)
C5': (48.063,103.583,116.339)
P: (48.555,101.024,116.086)
C4': (46.985,104.606,116.111)
C2': (44.804,103.781,115.618)
O2': (43.421,103.973,115.816)
N1: (45.042,104.201,113.111)
O4: (44.228,103.142,109.318)
O2: (44.237,106.274,112.567)
C6: (45.308,102.914,112.697)
C5: (45.055,102.490,111.451)
O3': (45.071,105.513,117.238)
N3: (44.249,104.663,110.974)
OP1: (49.169,101.027,117.433)
OP2: (47.823,99.810,115.613)
C2: (44.492,105.126,112.241)
C1': (45.320,104.657,114.482)
C3': (45.643,104.306,116.776)
O5': (47.587,102.282,116.000)
O4': (46.715,104.702,114.683)
C5': (48.063,103.583,116.339)
P: (48.555,101.024,116.086)
C4': (46.985,104.606,116.111)
C2': (44.804,103.781,115.618)
O2': (43.421,103.973,115.816)
N1: (45.042,104.201,113.111)
O4: (44.228,103.142,109.318)
O2: (44.237,106.274,112.567)
C6: (45.308,102.914,112.697)
C5: (45.055,102.490,111.451)
O3': (45.071,105.513,117.238)
C2: (41.836,100.577,115.141)
OP1: (44.939,93.755,114.851)
OP2: (43.742,95.133,116.656)
C4: (40.849,99.584,117.002)
O5': (44.112,96.085,114.400)
C3': (45.356,98.289,112.795)
C1': (43.448,99.311,113.749)
O4': (42.987,98.229,112.962)
C5': (44.059,96.075,112.961)
P: (43.898,94.746,115.232)
O2: (41.998,101.546,114.375)
C4': (44.116,97.486,112.429)
C2': (44.915,99.025,114.062)
O2': (45.621,100.227,114.325)
N1: (42.573,99.404,114.930)
N3: (40.972,100.631,116.179)
N4: (39.971,99.676,118.002)
C6: (42.456,98.351,115.797)
C5: (41.615,98.398,116.835)
O3': (45.638,99.180,111.721)
OP1: (44.939,93.755,114.851)
OP2: (43.742,95.133,116.656)
C4: (40.849,99.584,117.002)
O5': (44.112,96.085,114.400)
C3': (45.356,98.289,112.795)
C1': (43.448,99.311,113.749)
O4': (42.987,98.229,112.962)
C5': (44.059,96.075,112.961)
P: (43.898,94.746,115.232)
O2: (41.998,101.546,114.375)
C4': (44.116,97.486,112.429)
C2': (44.915,99.025,114.062)
O2': (45.621,100.227,114.325)
N1: (42.573,99.404,114.930)
N3: (40.972,100.631,116.179)
N4: (39.971,99.676,118.002)
C6: (42.456,98.351,115.797)
C5: (41.615,98.398,116.835)
O3': (45.638,99.180,111.721)
Image (generated by PyMOL):