Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02336:02334
Extra
PDB:
ATOM 1 O3' G A2335 69.371 97.410 120.434 1.00 51.64 O
ATOM 2 P U A2336 69.866 98.417 121.601 1.00 53.19 P
ATOM 3 OP1 U A2336 71.026 97.770 122.276 1.00 55.44 O
ATOM 4 OP2 U A2336 68.689 98.836 122.413 1.00 53.77 O
ATOM 5 O5' U A2336 70.415 99.701 120.834 1.00 50.81 O
ATOM 6 C5' U A2336 71.687 99.685 120.157 1.00 47.49 C
ATOM 7 C4' U A2336 72.006 101.066 119.627 1.00 46.10 C
ATOM 8 O4' U A2336 70.996 101.450 118.655 1.00 46.27 O
ATOM 9 C3' U A2336 71.967 102.185 120.657 1.00 45.22 C
ATOM 10 O3' U A2336 73.179 102.270 121.405 1.00 44.08 O
ATOM 11 C2' U A2336 71.703 103.417 119.798 1.00 44.67 C
ATOM 12 O2' U A2336 72.856 103.902 119.147 1.00 45.97 O
ATOM 13 C1' U A2336 70.759 102.849 118.737 1.00 45.54 C
ATOM 14 N1 U A2336 69.329 103.085 119.002 1.00 44.64 N
ATOM 15 C2 U A2336 68.832 104.362 118.765 1.00 45.06 C
ATOM 16 O2 U A2336 69.527 105.286 118.351 1.00 44.84 O
ATOM 17 N3 U A2336 67.492 104.520 119.031 1.00 41.94 N
ATOM 18 C4 U A2336 66.621 103.566 119.501 1.00 41.57 C
ATOM 19 O4 U A2336 65.457 103.880 119.737 1.00 41.70 O
ATOM 20 C5 U A2336 67.203 102.276 119.718 1.00 42.97 C
ATOM 21 C6 U A2336 68.503 102.083 119.468 1.00 44.01 C
ATOM 22 P C A2337 73.141 102.780 122.933 1.00 45.99 P
ATOM 23 OP1 C A2337 74.546 102.998 123.366 1.00 44.41 O
ATOM 24 OP2 C A2337 72.256 101.888 123.734 1.00 44.54 O
ATOM 25 O5' C A2337 72.437 104.204 122.831 1.00 45.38 O
TER
ATOM 1 O3' U B2333 58.636 99.874 116.124 1.00 38.45 O
ATOM 2 P C B2334 58.555 99.990 117.727 1.00 40.08 P
ATOM 3 OP1 C B2334 58.110 98.660 118.222 1.00 37.35 O
ATOM 4 OP2 C B2334 57.788 101.210 118.093 1.00 36.65 O
ATOM 5 O5' C B2334 60.068 100.200 118.172 1.00 40.18 O
ATOM 6 C5' C B2334 61.093 99.287 117.743 1.00 39.61 C
ATOM 7 C4' C B2334 62.453 99.844 118.074 1.00 41.28 C
ATOM 8 O4' C B2334 62.729 100.999 117.221 1.00 42.75 O
ATOM 9 C3' C B2334 62.607 100.335 119.518 1.00 41.73 C
ATOM 10 O3' C B2334 63.924 100.055 119.973 1.00 43.55 O
ATOM 11 C2' C B2334 62.468 101.845 119.357 1.00 41.92 C
ATOM 12 O2' C B2334 63.048 102.627 120.386 1.00 40.14 O
ATOM 13 C1' C B2334 63.201 102.043 118.033 1.00 41.66 C
ATOM 14 N1 C B2334 63.016 103.351 117.377 1.00 41.89 N
ATOM 15 C2 C B2334 61.732 103.951 117.322 1.00 42.94 C
ATOM 16 O2 C B2334 60.725 103.285 117.639 1.00 41.11 O
ATOM 17 N3 C B2334 61.634 105.242 116.912 1.00 42.44 N
ATOM 18 C4 C B2334 62.733 105.909 116.537 1.00 42.47 C
ATOM 19 N4 C B2334 62.613 107.207 116.244 1.00 42.59 N
ATOM 20 C5 C B2334 64.012 105.283 116.471 1.00 41.81 C
ATOM 21 C6 C B2334 64.105 104.017 116.892 1.00 41.76 C
ATOM 22 P G B2335 64.258 98.633 120.640 1.00 44.37 P
ATOM 23 OP1 G B2335 63.281 97.637 120.131 1.00 43.77 O
ATOM 24 OP2 G B2335 64.411 98.835 122.109 1.00 44.16 O
ATOM 25 O5' G B2335 65.689 98.292 120.030 1.00 45.43 O
TER
ATOM 2 P U A2336 69.866 98.417 121.601 1.00 53.19 P
ATOM 3 OP1 U A2336 71.026 97.770 122.276 1.00 55.44 O
ATOM 4 OP2 U A2336 68.689 98.836 122.413 1.00 53.77 O
ATOM 5 O5' U A2336 70.415 99.701 120.834 1.00 50.81 O
ATOM 6 C5' U A2336 71.687 99.685 120.157 1.00 47.49 C
ATOM 7 C4' U A2336 72.006 101.066 119.627 1.00 46.10 C
ATOM 8 O4' U A2336 70.996 101.450 118.655 1.00 46.27 O
ATOM 9 C3' U A2336 71.967 102.185 120.657 1.00 45.22 C
ATOM 10 O3' U A2336 73.179 102.270 121.405 1.00 44.08 O
ATOM 11 C2' U A2336 71.703 103.417 119.798 1.00 44.67 C
ATOM 12 O2' U A2336 72.856 103.902 119.147 1.00 45.97 O
ATOM 13 C1' U A2336 70.759 102.849 118.737 1.00 45.54 C
ATOM 14 N1 U A2336 69.329 103.085 119.002 1.00 44.64 N
ATOM 15 C2 U A2336 68.832 104.362 118.765 1.00 45.06 C
ATOM 16 O2 U A2336 69.527 105.286 118.351 1.00 44.84 O
ATOM 17 N3 U A2336 67.492 104.520 119.031 1.00 41.94 N
ATOM 18 C4 U A2336 66.621 103.566 119.501 1.00 41.57 C
ATOM 19 O4 U A2336 65.457 103.880 119.737 1.00 41.70 O
ATOM 20 C5 U A2336 67.203 102.276 119.718 1.00 42.97 C
ATOM 21 C6 U A2336 68.503 102.083 119.468 1.00 44.01 C
ATOM 22 P C A2337 73.141 102.780 122.933 1.00 45.99 P
ATOM 23 OP1 C A2337 74.546 102.998 123.366 1.00 44.41 O
ATOM 24 OP2 C A2337 72.256 101.888 123.734 1.00 44.54 O
ATOM 25 O5' C A2337 72.437 104.204 122.831 1.00 45.38 O
TER
ATOM 1 O3' U B2333 58.636 99.874 116.124 1.00 38.45 O
ATOM 2 P C B2334 58.555 99.990 117.727 1.00 40.08 P
ATOM 3 OP1 C B2334 58.110 98.660 118.222 1.00 37.35 O
ATOM 4 OP2 C B2334 57.788 101.210 118.093 1.00 36.65 O
ATOM 5 O5' C B2334 60.068 100.200 118.172 1.00 40.18 O
ATOM 6 C5' C B2334 61.093 99.287 117.743 1.00 39.61 C
ATOM 7 C4' C B2334 62.453 99.844 118.074 1.00 41.28 C
ATOM 8 O4' C B2334 62.729 100.999 117.221 1.00 42.75 O
ATOM 9 C3' C B2334 62.607 100.335 119.518 1.00 41.73 C
ATOM 10 O3' C B2334 63.924 100.055 119.973 1.00 43.55 O
ATOM 11 C2' C B2334 62.468 101.845 119.357 1.00 41.92 C
ATOM 12 O2' C B2334 63.048 102.627 120.386 1.00 40.14 O
ATOM 13 C1' C B2334 63.201 102.043 118.033 1.00 41.66 C
ATOM 14 N1 C B2334 63.016 103.351 117.377 1.00 41.89 N
ATOM 15 C2 C B2334 61.732 103.951 117.322 1.00 42.94 C
ATOM 16 O2 C B2334 60.725 103.285 117.639 1.00 41.11 O
ATOM 17 N3 C B2334 61.634 105.242 116.912 1.00 42.44 N
ATOM 18 C4 C B2334 62.733 105.909 116.537 1.00 42.47 C
ATOM 19 N4 C B2334 62.613 107.207 116.244 1.00 42.59 N
ATOM 20 C5 C B2334 64.012 105.283 116.471 1.00 41.81 C
ATOM 21 C6 C B2334 64.105 104.017 116.892 1.00 41.76 C
ATOM 22 P G B2335 64.258 98.633 120.640 1.00 44.37 P
ATOM 23 OP1 G B2335 63.281 97.637 120.131 1.00 43.77 O
ATOM 24 OP2 G B2335 64.411 98.835 122.109 1.00 44.16 O
ATOM 25 O5' G B2335 65.689 98.292 120.030 1.00 45.43 O
TER
Atoms:
C4: (66.621,103.566,119.501)
N3: (67.492,104.520,119.031)
OP1: (71.026,97.770,122.276)
OP2: (68.689,98.836,122.413)
C2: (68.832,104.362,118.765)
C1': (70.759,102.849,118.737)
C3': (71.967,102.185,120.657)
O5': (70.415,99.701,120.834)
O4': (70.996,101.450,118.655)
C5': (71.687,99.685,120.157)
P: (69.866,98.417,121.601)
C4': (72.006,101.066,119.627)
C2': (71.703,103.417,119.798)
O2': (72.856,103.902,119.147)
N1: (69.329,103.085,119.002)
O4: (65.457,103.880,119.737)
O2: (69.527,105.286,118.351)
C6: (68.503,102.083,119.468)
C5: (67.203,102.276,119.718)
O3': (73.179,102.270,121.405)
N3: (67.492,104.520,119.031)
OP1: (71.026,97.770,122.276)
OP2: (68.689,98.836,122.413)
C2: (68.832,104.362,118.765)
C1': (70.759,102.849,118.737)
C3': (71.967,102.185,120.657)
O5': (70.415,99.701,120.834)
O4': (70.996,101.450,118.655)
C5': (71.687,99.685,120.157)
P: (69.866,98.417,121.601)
C4': (72.006,101.066,119.627)
C2': (71.703,103.417,119.798)
O2': (72.856,103.902,119.147)
N1: (69.329,103.085,119.002)
O4: (65.457,103.880,119.737)
O2: (69.527,105.286,118.351)
C6: (68.503,102.083,119.468)
C5: (67.203,102.276,119.718)
O3': (73.179,102.270,121.405)
C2: (61.732,103.951,117.322)
OP1: (58.110,98.660,118.222)
OP2: (57.788,101.210,118.093)
C4: (62.733,105.909,116.537)
O5': (60.068,100.200,118.172)
C3': (62.607,100.335,119.518)
C1': (63.201,102.043,118.033)
O4': (62.729,100.999,117.221)
C5': (61.093,99.287,117.743)
P: (58.555,99.990,117.727)
O2: (60.725,103.285,117.639)
C4': (62.453,99.844,118.074)
C2': (62.468,101.845,119.357)
O2': (63.048,102.627,120.386)
N1: (63.016,103.351,117.377)
N3: (61.634,105.242,116.912)
N4: (62.613,107.207,116.244)
C6: (64.105,104.017,116.892)
C5: (64.012,105.283,116.471)
O3': (63.924,100.055,119.973)
OP1: (58.110,98.660,118.222)
OP2: (57.788,101.210,118.093)
C4: (62.733,105.909,116.537)
O5': (60.068,100.200,118.172)
C3': (62.607,100.335,119.518)
C1': (63.201,102.043,118.033)
O4': (62.729,100.999,117.221)
C5': (61.093,99.287,117.743)
P: (58.555,99.990,117.727)
O2: (60.725,103.285,117.639)
C4': (62.453,99.844,118.074)
C2': (62.468,101.845,119.357)
O2': (63.048,102.627,120.386)
N1: (63.016,103.351,117.377)
N3: (61.634,105.242,116.912)
N4: (62.613,107.207,116.244)
C6: (64.105,104.017,116.892)
C5: (64.012,105.283,116.471)
O3': (63.924,100.055,119.973)
Image (generated by PyMOL):